Cow genome map

Conread name: Ova1-OVRM10075A05

Conread position: 50-225
Cow position: chr15:17812152-17812320 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 53-286
Cow position: chr15:52804831-52804606 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 149, 23

Conread position: 61-286
Cow position: chr15:275497-275709 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 179, 44

Conread position: 73-286
Cow position: chr15:42789309-42789095 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 116, 0

Conread position: 75-287
Cow position: chr15:10737912-10737690 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 112, 37

Conread position: 77-275
Cow position: chr15:47058597-47058788 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 151
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 22, 0

Conread position: 78-205
Cow position: chr15:22728474-22728596 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 78-286
Cow position: chr15:34207337-34207134 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 28, 59

Conread position: 78-321
Cow position: chr15:2141451-2141216 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 167
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 79-192
Cow position: chr15:12034823-12034713 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 79-192
Cow position: chr15:16261199-16261312 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 79-286
Cow position: chr15:23275409-23275595 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 79-286
Cow position: chr15:28788059-28788269 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 166
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 9, 30

Conread position: 80-271
Cow position: chr15:24305706-24305523 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 11, 0

Conread position: 80-288
Cow position: chr15:12264741-12264534 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 30, 20

Conread position: 80-302
Cow position: chr15:40415794-40415571 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 41

Conread position: 81-189
Cow position: chr15:25208884-25208780 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 81-288
Cow position: chr15:5535510-5535305 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 122, 24

Conread position: 82-286
Cow position: chr15:14281411-14281602 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 82-286
Cow position: chr15:18776899-18776698 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 13, 28

Conread position: 84-271
Cow position: chr15:8623990-8624165 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 7, 29

Conread position: 86-283
Cow position: chr15:17870413-17870234 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 87-286
Cow position: chr15:47042763-47042576 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 50, 25

Conread position: 88-275
Cow position: chr15:4406868-4407061 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 68, 27

Conread position: 88-282
Cow position: chr15:1984131-1984345 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 80, 12

Conread position: 88-284
Cow position: chr15:35441231-35441027 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 75, 17

Conread position: 88-286
Cow position: chr15:26896822-26896641 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 22, 12

Conread position: 89-286
Cow position: chr15:10431662-10431866 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 17, 0

Conread position: 89-302
Cow position: chr15:29604841-29604632 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 23

Conread position: 90-206
Cow position: chr15:16911917-16911800 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 98, 22

Conread position: 90-295
Cow position: chr15:17353778-17353585 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 93-286
Cow position: chr15:10457142-10456962 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 95-286
Cow position: chr15:31175651-31175846 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 158
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 68, 13

Conread position: 95-286
Cow position: chr15:50660485-50660677 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 110

Conread position: 95-291
Cow position: chr15:33976834-33976638 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 44, 194

Conread position: 101-286
Cow position: chr15:21389300-21389111 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 61, 11

Conread position: 108-286
Cow position: chr15:16476853-16476686 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 55, 0

Conread position: 111-193
Cow position: chr15:31396003-31396085 (view UCSC Genome Browser custom track)
Alignm length: 83
Alignm identity: 73
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 111-193
Cow position: chr15:31408141-31408223 (view UCSC Genome Browser custom track)
Alignm length: 83
Alignm identity: 73
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 111-276
Cow position: chr15:38877629-38877470 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 111-276
Cow position: chr15:52611188-52611346 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 111-283
Cow position: chr15:10335634-10335805 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 143
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 95, 162

Conread position: 111-286
Cow position: chr15:6273012-6272837 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 41, 119

Conread position: 111-286
Cow position: chr15:10442610-10442447 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 111-286
Cow position: chr15:13613454-13613635 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 79, 8

Conread position: 111-286
Cow position: chr15:23719602-23719430 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 57, 0

Conread position: 111-286
Cow position: chr15:27016371-27016194 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 65, 0

Conread position: 111-287
Cow position: chr15:47592787-47592616 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 142
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 97, 149

Conread position: 112-286
Cow position: chr15:5657719-5657887 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 77, 0

Conread position: 112-286
Cow position: chr15:36714129-36713960 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 92, 0

Conread position: 112-286
Cow position: chr15:41000198-41000017 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 113-296
Cow position: chr15:23598436-23598252 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 154, 118

Conread position: 113-370
Cow position: chr15:51701421-51701168 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 183
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 100, 44

Conread position: 114-286
Cow position: chr15:19758950-19759114 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 67, 0

Conread position: 120-286
Cow position: chr15:15232809-15232636 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 144
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 8, 0

Conread position: 120-286
Cow position: chr15:34145366-34145202 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 9, 17

Conread position: 137-286
Cow position: chr15:31024903-31025046 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 138-285
Cow position: chr15:11912644-11912504 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 142-286
Cow position: chr15:40594602-40594452 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 147-285
Cow position: chr15:44280017-44280154 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 86, 23

Conread position: 154-287
Cow position: chr15:49257790-49257918 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 159-284
Cow position: chr15:14261331-14261206 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 166-265
Cow position: chr15:19847272-19847174 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 169-313
Cow position: chr15:29330941-29331085 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 7, 118

Conread position: 180-286
Cow position: chr15:25650463-25650357 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 92
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 190-286
Cow position: chr15:244737-244834 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 190-296
Cow position: chr15:840191-840085 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.