Cow genome map

Conread name: Ova1-OVRM10075A05

Conread position: 41-282
Cow position: chr16:6900751-6900994 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 29, 19

Conread position: 58-302
Cow position: chr16:31880508-31880743 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 52, 109

Conread position: 67-304
Cow position: chr16:24403174-24403409 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 175
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 24, 7

Conread position: 72-288
Cow position: chr16:47633100-47632894 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 148
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 73-287
Cow position: chr16:12097889-12097677 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 76-302
Cow position: chr16:6319450-6319225 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 37

Conread position: 77-286
Cow position: chr16:3304254-3304060 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 72, 23

Conread position: 77-286
Cow position: chr16:24826312-24826110 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 16, 39

Conread position: 78-203
Cow position: chr16:48340176-48340296 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 79-265
Cow position: chr16:1829407-1829222 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 35

Conread position: 80-231
Cow position: chr16:54084301-54084156 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 80-275
Cow position: chr16:30140794-30140977 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 80-286
Cow position: chr16:11422527-11422337 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 12, 0

Conread position: 80-287
Cow position: chr16:9973268-9973463 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 162
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 13, 0

Conread position: 80-287
Cow position: chr16:29145038-29145246 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 120, 33

Conread position: 80-292
Cow position: chr16:14046297-14046498 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 13, 0

Conread position: 80-312
Cow position: chr16:33869533-33869753 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 81-205
Cow position: chr16:45439487-45439368 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 81-286
Cow position: chr16:11922788-11922991 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 159
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 16, 32

Conread position: 82-284
Cow position: chr16:19003294-19003494 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 30, 125

Conread position: 84-286
Cow position: chr16:17627164-17626966 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 103, 23

Conread position: 84-286
Cow position: chr16:39416599-39416798 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 124, 24

Conread position: 86-286
Cow position: chr16:17291773-17291985 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 79, 14

Conread position: 87-286
Cow position: chr16:47820785-47820604 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 10, 31

Conread position: 87-287
Cow position: chr16:7550221-7550004 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 168
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 116, 25

Conread position: 88-285
Cow position: chr16:3122996-3122797 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 76, 24

Conread position: 88-286
Cow position: chr16:12454564-12454752 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 88-286
Cow position: chr16:13611227-13611417 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 12, 0

Conread position: 88-286
Cow position: chr16:48448950-48448760 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 88-286
Cow position: chr16:52705837-52706039 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 102, 24

Conread position: 88-288
Cow position: chr16:8273606-8273803 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 27, 0

Conread position: 88-288
Cow position: chr16:14005887-14006084 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 49

Conread position: 88-307
Cow position: chr16:33871874-33871661 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 150
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 202, 25

Conread position: 88-321
Cow position: chr16:22841839-22842054 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 89-206
Cow position: chr16:29162944-29163063 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 89-285
Cow position: chr16:12091445-12091625 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 152
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 144, 13

Conread position: 89-286
Cow position: chr16:29608730-29608546 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 19, 0

Conread position: 89-287
Cow position: chr16:8953466-8953647 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 156
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 18, 0

Conread position: 90-284
Cow position: chr16:52224105-52224303 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 17, 171

Conread position: 94-263
Cow position: chr16:20749414-20749252 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 95-286
Cow position: chr16:1415078-1415266 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 84, 16

Conread position: 95-286
Cow position: chr16:17135935-17135761 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 102-321
Cow position: chr16:8065424-8065647 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 10, 0

Conread position: 105-286
Cow position: chr16:53792611-53792782 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 108-302
Cow position: chr16:7612074-7611885 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 111-267
Cow position: chr16:51239023-51239173 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 95, 0

Conread position: 111-275
Cow position: chr16:7155445-7155613 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 119
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 111-275
Cow position: chr16:11185579-11185417 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 118
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 31, 91

Conread position: 111-275
Cow position: chr16:11621363-11621521 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 111-275
Cow position: chr16:13726060-13725896 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 111-275
Cow position: chr16:37669526-37669689 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 135
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 23, 84

Conread position: 111-282
Cow position: chr16:53089144-53089310 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 96, 124

Conread position: 111-283
Cow position: chr16:30717225-30717041 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 65, 0

Conread position: 111-285
Cow position: chr16:49174485-49174322 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 122, 77

Conread position: 111-286
Cow position: chr16:3114757-3114576 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 143
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 22, 42

Conread position: 111-286
Cow position: chr16:11390085-11390248 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 111-286
Cow position: chr16:17460366-17460205 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 111-286
Cow position: chr16:21761759-21761933 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 73, 0

Conread position: 111-286
Cow position: chr16:39171930-39172110 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 23

Conread position: 111-288
Cow position: chr16:6823905-6823726 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 94, 18

Conread position: 111-302
Cow position: chr16:28834061-28833865 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 185

Conread position: 111-302
Cow position: chr16:53614314-53614118 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 59, 184

Conread position: 111-319
Cow position: chr16:42977663-42977474 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 112-286
Cow position: chr16:56875458-56875627 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 121, 61

Conread position: 112-304
Cow position: chr16:13972953-13973138 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 46, 73

Conread position: 113-286
Cow position: chr16:17945728-17945558 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 55, 0

Conread position: 113-286
Cow position: chr16:43323047-43322886 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 113-286
Cow position: chr16:52363895-52363720 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 97, 0

Conread position: 113-288
Cow position: chr16:9986869-9987033 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 120-307
Cow position: chr16:51915771-51915590 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 154
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 48, 0

Conread position: 121-284
Cow position: chr16:7447797-7447956 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 121, 41

Conread position: 130-321
Cow position: chr16:9500714-9500525 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 117, 33

Conread position: 137-288
Cow position: chr16:33054311-33054446 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 138-333
Cow position: chr16:8438464-8438654 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 34, 153

Conread position: 139-286
Cow position: chr16:8933250-8933391 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 94, 29

Conread position: 151-291
Cow position: chr16:18353791-18353925 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 153-286
Cow position: chr16:7980959-7980826 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 7

Conread position: 166-286
Cow position: chr16:20025597-20025478 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 168-286
Cow position: chr16:496221-496339 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 172-286
Cow position: chr16:20265412-20265526 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 175-286
Cow position: chr16:41696944-41697055 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 184-286
Cow position: chr16:21370053-21370153 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 188-286
Cow position: chr16:5396682-5396780 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 190-286
Cow position: chr16:19478631-19478728 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 190-286
Cow position: chr16:31561888-31561792 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 190-315
Cow position: chr16:11615109-11615236 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 101

Conread position: 195-286
Cow position: chr16:33235034-33235127 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 22, 0

Show alignments to all cow chromosomes.