Cow genome map
| Conread name: | Ova1-OVRM10075A05 |
| Conread position: | 66-312 |
| Cow position: | chr19:18921001-18921244 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 25, 47 |
| Conread position: | 73-286 |
| Cow position: | chr19:17069093-17068879 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 7, 28 |
| Conread position: | 73-316 |
| Cow position: | chr19:46094415-46094640 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 74-302 |
| Cow position: | chr19:54915461-54915682 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 17, 39 |
| Conread position: | 76-256 |
| Cow position: | chr19:42069486-42069314 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 77-276 |
| Cow position: | chr19:13765934-13766125 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 33, 122 |
| Conread position: | 77-283 |
| Cow position: | chr19:4587522-4587710 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 77-284 |
| Cow position: | chr19:38664102-38664297 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 14, 89 |
| Conread position: | 78-255 |
| Cow position: | chr19:14169235-14169396 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 80-286 |
| Cow position: | chr19:10081295-10081100 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 17, 34 |
| Conread position: | 80-286 |
| Cow position: | chr19:36060156-36059963 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 80-286 |
| Cow position: | chr19:51396964-51397171 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 121, 32 |
| Conread position: | 80-287 |
| Cow position: | chr19:17796114-17795920 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 80-298 |
| Cow position: | chr19:14167829-14167616 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 33, 12 |
| Conread position: | 81-287 |
| Cow position: | chr19:35742390-35742186 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 82, 19 |
| Conread position: | 81-312 |
| Cow position: | chr19:16693814-16694031 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 82-270 |
| Cow position: | chr19:4511171-4511354 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 10, 36 |
| Conread position: | 85-286 |
| Cow position: | chr19:2130985-2131178 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 8, 24 |
| Conread position: | 86-308 |
| Cow position: | chr19:19562029-19561798 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 26, 64 |
| Conread position: | 87-310 |
| Cow position: | chr19:21605337-21605123 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 88-182 |
| Cow position: | chr19:49959069-49958976 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 80 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 88-270 |
| Cow position: | chr19:10661386-10661579 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 22, 144 |
| Conread position: | 88-284 |
| Cow position: | chr19:52735328-52735135 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 120, 24 |
| Conread position: | 88-285 |
| Cow position: | chr19:13316212-13316394 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 10, 25 |
| Conread position: | 88-286 |
| Cow position: | chr19:43642560-43642769 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 28, 48 |
| Conread position: | 88-288 |
| Cow position: | chr19:42236242-42236051 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 145, 43 |
| Conread position: | 90-262 |
| Cow position: | chr19:22218335-22218512 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 88, 18 |
| Conread position: | 92-302 |
| Cow position: | chr19:6344277-6344084 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 95-255 |
| Cow position: | chr19:52711146-52711306 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 61, 17 |
| Conread position: | 95-276 |
| Cow position: | chr19:29471801-29471626 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 123, 13 |
| Conread position: | 95-286 |
| Cow position: | chr19:11424092-11424290 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 76, 17 |
| Conread position: | 95-286 |
| Cow position: | chr19:25035690-25035504 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 95-286 |
| Cow position: | chr19:38948089-38948266 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 143, 17 |
| Conread position: | 95-306 |
| Cow position: | chr19:39376209-39376407 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 131, 13 |
| Conread position: | 102-303 |
| Cow position: | chr19:14348212-14348022 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 109-312 |
| Cow position: | chr19:25853770-25853575 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 111-231 |
| Cow position: | chr19:54919612-54919730 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 111-256 |
| Cow position: | chr19:32505508-32505648 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 111-257 |
| Cow position: | chr19:38392985-38392833 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 111-282 |
| Cow position: | chr19:10114429-10114606 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 111-284 |
| Cow position: | chr19:20984570-20984746 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 79, 20 |
| Conread position: | 111-286 |
| Cow position: | chr19:6079173-6079336 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 111-286 |
| Cow position: | chr19:19489642-19489807 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 111-286 |
| Cow position: | chr19:25696029-25696205 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 66, 118 |
| Conread position: | 111-286 |
| Cow position: | chr19:34757815-34757977 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 111-286 |
| Cow position: | chr19:50682250-50682420 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 111-287 |
| Cow position: | chr19:8034162-8034326 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 111-287 |
| Cow position: | chr19:34619822-34620004 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 47, 157 |
| Conread position: | 111-321 |
| Cow position: | chr19:7404179-7404385 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 111-321 |
| Cow position: | chr19:12036290-12036517 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 55, 197 |
| Conread position: | 112-286 |
| Cow position: | chr19:21199326-21199164 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 112-286 |
| Cow position: | chr19:35018055-35018220 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 113-326 |
| Cow position: | chr19:10287648-10287432 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 155, 177 |
| Conread position: | 118-286 |
| Cow position: | chr19:20331650-20331811 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 118-301 |
| Cow position: | chr19:48475334-48475138 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 118-324 |
| Cow position: | chr19:30886604-30886382 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 52, 185 |
| Conread position: | 133-270 |
| Cow position: | chr19:23349992-23349856 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 161-275 |
| Cow position: | chr19:33702204-33702318 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 166-275 |
| Cow position: | chr19:25606293-25606400 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 177-288 |
| Cow position: | chr19:51637174-51637063 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 181-286 |
| Cow position: | chr19:21378339-21378444 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 186-286 |
| Cow position: | chr19:27968571-27968671 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 188-280 |
| Cow position: | chr19:18051040-18051132 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 78 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 190-286 |
| Cow position: | chr19:10545584-10545679 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 82 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 190-286 |
| Cow position: | chr19:14823377-14823281 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 192-284 |
| Cow position: | chr19:18054137-18054229 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 78 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 192-311 |
| Cow position: | chr19:43413901-43413785 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
Show alignments to all cow chromosomes.