Cow genome map
| Conread name: | Ova1-OVRM10075A05 |
| Conread position: | 70-243 |
| Cow position: | chr20:16253725-16253556 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 13, 33 |
| Conread position: | 73-284 |
| Cow position: | chr20:5827230-5827021 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 7, 40 |
| Conread position: | 79-289 |
| Cow position: | chr20:26790332-26790535 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 35, 92 |
| Conread position: | 79-302 |
| Cow position: | chr20:12995729-12995941 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 33, 85 |
| Conread position: | 80-269 |
| Cow position: | chr20:36880739-36880931 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 17, 61 |
| Conread position: | 80-272 |
| Cow position: | chr20:9537426-9537225 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 64, 13 |
| Conread position: | 80-285 |
| Cow position: | chr20:21715053-21714841 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 12, 16 |
| Conread position: | 80-286 |
| Cow position: | chr20:38515051-38514858 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 32, 15 |
| Conread position: | 80-291 |
| Cow position: | chr20:23870534-23870744 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 27, 13 |
| Conread position: | 81-278 |
| Cow position: | chr20:20242364-20242171 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 73, 12 |
| Conread position: | 81-287 |
| Cow position: | chr20:36634091-36633891 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 82-286 |
| Cow position: | chr20:7709494-7709702 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 98, 26 |
| Conread position: | 83-302 |
| Cow position: | chr20:15847043-15846819 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 27, 48 |
| Conread position: | 84-286 |
| Cow position: | chr20:15547474-15547269 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 94, 25 |
| Conread position: | 88-191 |
| Cow position: | chr20:24310690-24310790 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 87 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 89-286 |
| Cow position: | chr20:21721475-21721289 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 21, 51 |
| Conread position: | 94-286 |
| Cow position: | chr20:11043210-11043395 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 16, 61 |
| Conread position: | 95-286 |
| Cow position: | chr20:37228823-37229005 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 95-310 |
| Cow position: | chr20:3588904-3588693 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 168 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 176, 17 |
| Conread position: | 95-321 |
| Cow position: | chr20:580653-580875 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 111-271 |
| Cow position: | chr20:10772462-10772299 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 111-286 |
| Cow position: | chr20:20056224-20056406 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 62, 170 |
| Conread position: | 111-286 |
| Cow position: | chr20:24902043-24902214 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 111-286 |
| Cow position: | chr20:30027605-30027427 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 38, 135 |
| Conread position: | 111-287 |
| Cow position: | chr20:3780946-3781127 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 86, 44 |
| Conread position: | 111-290 |
| Cow position: | chr20:9923822-9923642 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 62, 71 |
| Conread position: | 111-299 |
| Cow position: | chr20:33438725-33438913 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 59, 180 |
| Conread position: | 112-283 |
| Cow position: | chr20:39266706-39266876 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 112-286 |
| Cow position: | chr20:34835457-34835635 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 113-266 |
| Cow position: | chr20:4315413-4315263 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 113-286 |
| Cow position: | chr20:10052972-10052813 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 113-291 |
| Cow position: | chr20:20739045-20739212 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 113-320 |
| Cow position: | chr20:15589294-15589091 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 118-286 |
| Cow position: | chr20:12085206-12085358 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 127-286 |
| Cow position: | chr20:2169476-2169644 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 132-283 |
| Cow position: | chr20:23064604-23064753 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 101, 73 |
| Conread position: | 137-286 |
| Cow position: | chr20:40158134-40157979 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 34, 115 |
| Conread position: | 145-286 |
| Cow position: | chr20:38578550-38578685 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 147-284 |
| Cow position: | chr20:35211042-35211180 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 159-286 |
| Cow position: | chr20:36023194-36023321 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 180-286 |
| Cow position: | chr20:9412672-9412567 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 182-328 |
| Cow position: | chr20:15515257-15515402 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 184-286 |
| Cow position: | chr20:21815742-21815640 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 190-285 |
| Cow position: | chr20:26040921-26041018 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 82 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 190-286 |
| Cow position: | chr20:12581780-12581875 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 82 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 190-286 |
| Cow position: | chr20:19060664-19060760 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 81 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.