Cow genome map

Conread name: Ova1-OVRM10075A05

Conread position: 41-271
Cow position: chr22:40591044-40590825 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 54-291
Cow position: chr22:20847114-20846885 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 40, 22

Conread position: 55-299
Cow position: chr22:13841410-13841160 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 180
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 107, 37

Conread position: 57-286
Cow position: chr22:28665540-28665316 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 66, 0

Conread position: 68-295
Cow position: chr22:13878428-13878201 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 118, 40

Conread position: 69-284
Cow position: chr22:36569085-36569291 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 25, 11

Conread position: 73-286
Cow position: chr22:36609247-36609456 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 77, 22

Conread position: 77-359
Cow position: chr22:16621408-16621137 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 195
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 261, 31

Conread position: 79-253
Cow position: chr22:30689783-30689617 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 64

Conread position: 79-286
Cow position: chr22:2623292-2623489 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 159, 23

Conread position: 80-192
Cow position: chr22:35533014-35533125 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 80-274
Cow position: chr22:24063323-24063137 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 30, 41

Conread position: 80-283
Cow position: chr22:23440064-23440260 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 20, 0

Conread position: 80-284
Cow position: chr22:31309131-31308919 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 162
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 96, 0

Conread position: 80-285
Cow position: chr22:32651731-32651527 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 15

Conread position: 80-286
Cow position: chr22:3250765-3250961 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 165
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 14, 34

Conread position: 80-286
Cow position: chr22:3486552-3486745 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 20, 0

Conread position: 80-286
Cow position: chr22:6494386-6494194 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 80-286
Cow position: chr22:14647315-14647116 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 80-286
Cow position: chr22:22266537-22266341 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 11, 40

Conread position: 80-286
Cow position: chr22:23036399-23036197 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 160
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 137, 14

Conread position: 80-286
Cow position: chr22:27643970-27643770 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 159
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 32, 100

Conread position: 81-236
Cow position: chr22:26150904-26151062 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 98, 34

Conread position: 82-286
Cow position: chr22:12973939-12974135 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 89, 19

Conread position: 83-281
Cow position: chr22:12914843-12914652 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 11, 28

Conread position: 86-286
Cow position: chr22:27431474-27431670 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 23, 7

Conread position: 87-259
Cow position: chr22:27588295-27588124 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 119
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 153, 0

Conread position: 87-287
Cow position: chr22:14690753-14690939 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 88-286
Cow position: chr22:976889-977077 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 88-286
Cow position: chr22:8710140-8710340 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 80, 39

Conread position: 88-286
Cow position: chr22:23397739-23397941 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 88, 12

Conread position: 88-286
Cow position: chr22:30253422-30253233 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 17, 0

Conread position: 89-182
Cow position: chr22:9745386-9745480 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 89-275
Cow position: chr22:24336748-24336571 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 89-284
Cow position: chr22:26706567-26706774 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 98, 19

Conread position: 95-276
Cow position: chr22:16058193-16058019 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 75, 13

Conread position: 95-286
Cow position: chr22:10338908-10339086 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 148
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 17, 0

Conread position: 95-286
Cow position: chr22:17152886-17152710 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 95-286
Cow position: chr22:26316670-26316489 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 138, 17

Conread position: 100-286
Cow position: chr22:13327115-13326927 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 89, 8

Conread position: 101-286
Cow position: chr22:34104452-34104639 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 89, 54

Conread position: 108-284
Cow position: chr22:43743134-43743310 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 108-286
Cow position: chr22:8504541-8504372 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 143
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 58, 0

Conread position: 111-256
Cow position: chr22:10030893-10031028 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 111-276
Cow position: chr22:10286174-10286014 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 83, 0

Conread position: 111-280
Cow position: chr22:23695181-23695351 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 108, 88

Conread position: 111-284
Cow position: chr22:16823302-16823134 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 141, 88

Conread position: 111-286
Cow position: chr22:1563055-1563220 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 56, 0

Conread position: 111-286
Cow position: chr22:19173910-19173729 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 37, 49

Conread position: 111-286
Cow position: chr22:21235211-21235398 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 59, 151

Conread position: 111-286
Cow position: chr22:23077292-23077459 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 127, 0

Conread position: 111-286
Cow position: chr22:31510178-31510347 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 146
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 158, 23

Conread position: 111-286
Cow position: chr22:34930564-34930742 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 63, 140

Conread position: 111-287
Cow position: chr22:10324093-10323912 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 145
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 84, 0

Conread position: 111-302
Cow position: chr22:11468586-11468393 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 59, 96

Conread position: 111-320
Cow position: chr22:27274504-27274696 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 161
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 123, 55

Conread position: 112-283
Cow position: chr22:27047212-27047377 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 112-287
Cow position: chr22:10533811-10533625 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 97, 0

Conread position: 112-321
Cow position: chr22:11986696-11986908 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 20

Conread position: 113-283
Cow position: chr22:1026086-1025926 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 113-286
Cow position: chr22:1977963-1977782 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 148
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 50, 0

Conread position: 113-286
Cow position: chr22:10315279-10315109 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 102, 55

Conread position: 115-313
Cow position: chr22:44180794-44180601 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 119-321
Cow position: chr22:16044222-16044417 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 82, 0

Conread position: 120-284
Cow position: chr22:10752344-10752507 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 121-320
Cow position: chr22:21530155-21530356 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 55, 173

Conread position: 122-286
Cow position: chr22:749217-749380 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 123-285
Cow position: chr22:21215905-21215747 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 116
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 137-264
Cow position: chr22:22553079-22553204 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 137-286
Cow position: chr22:4974191-4974341 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 108
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 137-286
Cow position: chr22:26123076-26122930 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 137-286
Cow position: chr22:29325474-29325619 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 137-314
Cow position: chr22:13222295-13222122 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 69, 0

Conread position: 138-294
Cow position: chr22:6122702-6122860 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 145-259
Cow position: chr22:40750179-40750293 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 150-286
Cow position: chr22:17764544-17764412 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 58, 11

Conread position: 159-296
Cow position: chr22:21145436-21145579 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 160-271
Cow position: chr22:16633015-16632902 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 25, 78

Conread position: 166-284
Cow position: chr22:43119576-43119694 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 166-286
Cow position: chr22:3965339-3965219 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 166-320
Cow position: chr22:3950405-3950256 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 111, 0

Conread position: 167-286
Cow position: chr22:41682275-41682395 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 6, 0

Conread position: 167-287
Cow position: chr22:3317274-3317153 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 89

Conread position: 170-286
Cow position: chr22:22606373-22606258 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 176-286
Cow position: chr22:3997896-3997786 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 180-287
Cow position: chr22:4017612-4017505 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 186-286
Cow position: chr22:24071519-24071617 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 190-286
Cow position: chr22:9735398-9735302 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 190-286
Cow position: chr22:33565965-33566061 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 53

Conread position: 190-286
Cow position: chr22:44717850-44717754 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 80
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 190-303
Cow position: chr22:30684857-30684741 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 203-295
Cow position: chr22:15950270-15950361 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 79
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 85, 0

Show alignments to all cow chromosomes.