Cow genome map
| Conread name: | Ova1-OVRM10075A05 |
| Conread position: | 39-286 |
| Cow position: | chr23:41099475-41099737 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 37, 99 |
| Conread position: | 57-286 |
| Cow position: | chr23:13673767-13673993 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 57, 9 |
| Conread position: | 63-286 |
| Cow position: | chr23:21336229-21336445 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 17, 103 |
| Conread position: | 66-320 |
| Cow position: | chr23:1397778-1398029 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 113, 36 |
| Conread position: | 70-286 |
| Cow position: | chr23:22238586-22238783 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 40, 66 |
| Conread position: | 75-319 |
| Cow position: | chr23:24479694-24479951 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 13, 229 |
| Conread position: | 76-286 |
| Cow position: | chr23:20002505-20002293 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 107, 36 |
| Conread position: | 76-320 |
| Cow position: | chr23:38502856-38503096 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 9, 33 |
| Conread position: | 79-284 |
| Cow position: | chr23:5608835-5609039 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 104, 14 |
| Conread position: | 79-286 |
| Cow position: | chr23:21502389-21502592 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 102, 14 |
| Conread position: | 80-267 |
| Cow position: | chr23:1641027-1640847 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 21, 33 |
| Conread position: | 80-273 |
| Cow position: | chr23:22105800-22105612 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 80-276 |
| Cow position: | chr23:41219974-41220168 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 92, 20 |
| Conread position: | 80-284 |
| Cow position: | chr23:14524213-14524027 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 80-286 |
| Cow position: | chr23:11314798-11314996 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 158, 15 |
| Conread position: | 80-320 |
| Cow position: | chr23:18106725-18106961 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 128, 15 |
| Conread position: | 81-286 |
| Cow position: | chr23:343958-344148 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 81-286 |
| Cow position: | chr23:8698639-8698459 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 81-286 |
| Cow position: | chr23:18354894-18354688 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 166 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 12, 32 |
| Conread position: | 82-218 |
| Cow position: | chr23:31299460-31299327 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 82-276 |
| Cow position: | chr23:2487754-2487943 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 116, 17 |
| Conread position: | 82-319 |
| Cow position: | chr23:13511968-13511733 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 100, 13 |
| Conread position: | 85-274 |
| Cow position: | chr23:18679366-18679182 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 25, 117 |
| Conread position: | 86-285 |
| Cow position: | chr23:1768064-1767868 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 138, 26 |
| Conread position: | 87-193 |
| Cow position: | chr23:19274309-19274206 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 87-286 |
| Cow position: | chr23:35199573-35199379 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 151, 59 |
| Conread position: | 87-312 |
| Cow position: | chr23:29972611-29972400 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 203, 26 |
| Conread position: | 88-274 |
| Cow position: | chr23:21413094-21413270 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 88-286 |
| Cow position: | chr23:20744366-20744554 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 24, 81 |
| Conread position: | 88-286 |
| Cow position: | chr23:24927037-24926853 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 88-286 |
| Cow position: | chr23:27144906-27145107 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 59, 7 |
| Conread position: | 89-286 |
| Cow position: | chr23:22297820-22298000 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 89-287 |
| Cow position: | chr23:28798300-28798113 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 90-286 |
| Cow position: | chr23:18402054-18402251 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 98, 22 |
| Conread position: | 90-328 |
| Cow position: | chr23:20604478-20604715 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 97, 18 |
| Conread position: | 91-286 |
| Cow position: | chr23:5449929-5449743 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 94-286 |
| Cow position: | chr23:12334427-12334249 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 95-257 |
| Cow position: | chr23:4578830-4578986 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 153, 17 |
| Conread position: | 97-288 |
| Cow position: | chr23:26693961-26694145 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 99, 10 |
| Conread position: | 106-286 |
| Cow position: | chr23:30110062-30109884 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 73, 28 |
| Conread position: | 106-302 |
| Cow position: | chr23:26591699-26591887 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 110-286 |
| Cow position: | chr23:35247575-35247406 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 111-284 |
| Cow position: | chr23:3408695-3408870 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 144, 70 |
| Conread position: | 111-285 |
| Cow position: | chr23:3431279-3431109 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 111-286 |
| Cow position: | chr23:38454972-38455140 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 115, 57 |
| Conread position: | 111-302 |
| Cow position: | chr23:3835390-3835571 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 111-302 |
| Cow position: | chr23:23114271-23114082 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 112-284 |
| Cow position: | chr23:12602245-12602434 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 112-286 |
| Cow position: | chr23:27030496-27030330 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 113-284 |
| Cow position: | chr23:3281921-3282081 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 113-313 |
| Cow position: | chr23:204479-204293 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 8, 83 |
| Conread position: | 114-284 |
| Cow position: | chr23:3814073-3814240 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 119-286 |
| Cow position: | chr23:1760650-1760807 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 129-286 |
| Cow position: | chr23:5203735-5203893 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 41, 121 |
| Conread position: | 129-354 |
| Cow position: | chr23:30951153-30950930 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 41, 162 |
| Conread position: | 130-271 |
| Cow position: | chr23:10876591-10876453 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 103, 79 |
| Conread position: | 138-286 |
| Cow position: | chr23:11473315-11473469 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 72, 100 |
| Conread position: | 142-286 |
| Cow position: | chr23:25990253-25990398 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 136 |
| Conread position: | 166-282 |
| Cow position: | chr23:33717384-33717499 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 166-286 |
| Cow position: | chr23:38467938-38468058 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 166-286 |
| Cow position: | chr23:38499477-38499353 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 172-283 |
| Cow position: | chr23:23451457-23451348 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 175-282 |
| Cow position: | chr23:18605259-18605365 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 176-276 |
| Cow position: | chr23:23724662-23724762 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 82 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 182-286 |
| Cow position: | chr23:2160497-2160601 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 85 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 190-286 |
| Cow position: | chr23:534362-534266 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 81 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.