Cow genome map
| Conread name: | Ova1-OVRM10075A05 |
| Conread position: | 46-288 |
| Cow position: | chr25:34241828-34242072 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 25, 110 |
| Conread position: | 48-276 |
| Cow position: | chr25:32667009-32667227 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 48, 18 |
| Conread position: | 54-206 |
| Cow position: | chr25:8223195-8223043 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 122, 33 |
| Conread position: | 55-205 |
| Cow position: | chr25:33840010-33839854 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 57-286 |
| Cow position: | chr25:30619306-30619097 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 40, 23 |
| Conread position: | 65-286 |
| Cow position: | chr25:30624836-30625049 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 34, 67 |
| Conread position: | 70-243 |
| Cow position: | chr25:14212087-14211921 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 76-265 |
| Cow position: | chr25:7329323-7329120 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 124, 34 |
| Conread position: | 79-284 |
| Cow position: | chr25:28597386-28597574 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 79-286 |
| Cow position: | chr25:15218373-15218166 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 171 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 126, 29 |
| Conread position: | 79-320 |
| Cow position: | chr25:12427621-12427876 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 35, 252 |
| Conread position: | 80-193 |
| Cow position: | chr25:22538560-22538449 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 80-206 |
| Cow position: | chr25:13654115-13653988 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 80-213 |
| Cow position: | chr25:14212613-14212742 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 80-228 |
| Cow position: | chr25:36023179-36023033 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 9, 33 |
| Conread position: | 80-286 |
| Cow position: | chr25:32908174-32907972 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 80-302 |
| Cow position: | chr25:11585740-11585537 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 81-214 |
| Cow position: | chr25:19808293-19808429 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 81-236 |
| Cow position: | chr25:16000658-16000815 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 21, 32 |
| Conread position: | 81-257 |
| Cow position: | chr25:22261070-22261252 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 20, 32 |
| Conread position: | 81-286 |
| Cow position: | chr25:36135901-36136106 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 89, 27 |
| Conread position: | 83-273 |
| Cow position: | chr25:34170180-34169993 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 86, 29 |
| Conread position: | 86-284 |
| Cow position: | chr25:15695486-15695299 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 88-303 |
| Cow position: | chr25:10497480-10497256 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 178 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 24, 107 |
| Conread position: | 88-321 |
| Cow position: | chr25:18906122-18905885 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 79, 24 |
| Conread position: | 89-286 |
| Cow position: | chr25:27520540-27520724 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 90-285 |
| Cow position: | chr25:24167486-24167661 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 91-199 |
| Cow position: | chr25:7012928-7012825 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 91-275 |
| Cow position: | chr25:36019438-36019624 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 82, 9 |
| Conread position: | 93-286 |
| Cow position: | chr25:23918066-23917875 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 5, 20 |
| Conread position: | 94-265 |
| Cow position: | chr25:22508102-22508268 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 44, 29 |
| Conread position: | 94-284 |
| Cow position: | chr25:30278997-30279172 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 123, 18 |
| Conread position: | 95-285 |
| Cow position: | chr25:12899965-12899762 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 73, 17 |
| Conread position: | 95-286 |
| Cow position: | chr25:13805226-13805047 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 95-286 |
| Cow position: | chr25:26052131-26051937 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 89, 15 |
| Conread position: | 100-295 |
| Cow position: | chr25:23745487-23745286 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 60, 184 |
| Conread position: | 101-284 |
| Cow position: | chr25:7008113-7007948 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 111-235 |
| Cow position: | chr25:11841485-11841356 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 111-265 |
| Cow position: | chr25:35826076-35826226 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 111-274 |
| Cow position: | chr25:12195034-12195183 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 111-284 |
| Cow position: | chr25:7061045-7061220 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 111-286 |
| Cow position: | chr25:13567170-13567002 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 111-286 |
| Cow position: | chr25:21285087-21284910 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 59, 134 |
| Conread position: | 111-286 |
| Cow position: | chr25:35758638-35758811 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 111-313 |
| Cow position: | chr25:3744548-3744737 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 38, 73 |
| Conread position: | 111-315 |
| Cow position: | chr25:17144639-17144435 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 140, 23 |
| Conread position: | 111-333 |
| Cow position: | chr25:22520546-22520327 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 65, 78 |
| Conread position: | 114-320 |
| Cow position: | chr25:26161187-26160970 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 43, 144 |
| Conread position: | 115-286 |
| Cow position: | chr25:19478872-19478709 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 134-333 |
| Cow position: | chr25:13550876-13551069 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 175, 18 |
| Conread position: | 154-284 |
| Cow position: | chr25:15463751-15463623 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 65, 51 |
| Conread position: | 159-286 |
| Cow position: | chr25:8223066-8222940 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 166-286 |
| Cow position: | chr25:40931427-40931307 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 168-286 |
| Cow position: | chr25:22531432-22531315 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 188-286 |
| Cow position: | chr25:26679358-26679260 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 84 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 189-286 |
| Cow position: | chr25:26238994-26238896 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 83 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 190-286 |
| Cow position: | chr25:4157116-4157212 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 80 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 190-286 |
| Cow position: | chr25:13223029-13222934 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 81 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 190-286 |
| Cow position: | chr25:26072432-26072527 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 83 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 190-287 |
| Cow position: | chr25:30852896-30852800 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 83 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 199-287 |
| Cow position: | chr25:14210104-14210016 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 77 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.