Cow genome map

Conread name: Ova1-OVRM10075A05

Conread position: 54-265
Cow position: chr29:28733869-28734078 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 21, 9

Conread position: 60-201
Cow position: chr29:14821860-14821723 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 8, 41

Conread position: 60-202
Cow position: chr29:29176132-29176268 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 115, 33

Conread position: 60-277
Cow position: chr29:35630176-35630386 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 79, 45

Conread position: 70-347
Cow position: chr29:19742697-19742432 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 188
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 111, 32

Conread position: 77-205
Cow position: chr29:35832981-35832856 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 11, 32

Conread position: 80-258
Cow position: chr29:2623263-2623444 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 148
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 14, 34

Conread position: 80-271
Cow position: chr29:36210363-36210189 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 54, 21

Conread position: 80-286
Cow position: chr29:25333227-25333428 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 202, 35

Conread position: 80-291
Cow position: chr29:17022397-17022180 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 81, 35

Conread position: 80-302
Cow position: chr29:28840393-28840173 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 173
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 17, 107

Conread position: 80-321
Cow position: chr29:39329365-39329603 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 85, 0

Conread position: 81-207
Cow position: chr29:2720842-2720966 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 107
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 85, 21

Conread position: 82-286
Cow position: chr29:11527557-11527758 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 33, 0

Conread position: 82-286
Cow position: chr29:18579606-18579805 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 30, 0

Conread position: 83-249
Cow position: chr29:19586968-19587124 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 136
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 132, 19

Conread position: 83-273
Cow position: chr29:8768111-8767926 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 172, 18

Conread position: 83-286
Cow position: chr29:19061552-19061740 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 85-287
Cow position: chr29:42760685-42760488 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 135, 22

Conread position: 86-286
Cow position: chr29:26672691-26672877 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 87-205
Cow position: chr29:42364826-42364942 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 107, 26

Conread position: 88-287
Cow position: chr29:13373528-13373334 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 145, 24

Conread position: 88-339
Cow position: chr29:36058948-36059186 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 173
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 204, 23

Conread position: 89-286
Cow position: chr29:43080397-43080584 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 23, 106

Conread position: 93-321
Cow position: chr29:38581194-38580980 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 95-286
Cow position: chr29:11042647-11042466 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 37

Conread position: 95-286
Cow position: chr29:40298796-40298986 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 90, 11

Conread position: 95-302
Cow position: chr29:29940868-29940659 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 72, 20

Conread position: 96-317
Cow position: chr29:42771852-42771641 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 216, 12

Conread position: 109-286
Cow position: chr29:10156077-10156271 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 154
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 53, 168

Conread position: 111-282
Cow position: chr29:28949172-28949011 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 86, 0

Conread position: 111-286
Cow position: chr29:2262794-2262961 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 111-286
Cow position: chr29:6844423-6844598 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 122, 134

Conread position: 111-286
Cow position: chr29:19125517-19125356 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 52, 0

Conread position: 111-286
Cow position: chr29:23155422-23155260 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 111-286
Cow position: chr29:35070886-35071050 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 111-286
Cow position: chr29:40874215-40874045 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 111-288
Cow position: chr29:20579216-20579043 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 98, 0

Conread position: 111-295
Cow position: chr29:34760214-34760391 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 120, 83

Conread position: 111-326
Cow position: chr29:16365665-16365888 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 50, 188

Conread position: 112-206
Cow position: chr29:6440164-6440070 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 112-286
Cow position: chr29:29324234-29324389 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 141
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 82, 0

Conread position: 112-287
Cow position: chr29:11647300-11647127 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 121, 56

Conread position: 112-321
Cow position: chr29:13866993-13867210 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 66, 187

Conread position: 113-275
Cow position: chr29:6033928-6034096 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 134
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 87, 0

Conread position: 113-276
Cow position: chr29:40097166-40097006 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 67, 88

Conread position: 114-285
Cow position: chr29:683274-683453 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 102, 87

Conread position: 115-286
Cow position: chr29:37990804-37990965 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 82, 0

Conread position: 119-284
Cow position: chr29:11562805-11562649 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 120-286
Cow position: chr29:8926268-8926427 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 7, 80

Conread position: 129-286
Cow position: chr29:34688024-34687869 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 113
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 136-285
Cow position: chr29:2533464-2533318 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 75, 0

Conread position: 137-302
Cow position: chr29:22175860-22175700 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 96, 44

Conread position: 162-285
Cow position: chr29:23243718-23243843 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 172-287
Cow position: chr29:32210924-32211038 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 184-287
Cow position: chr29:629674-629571 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 190-286
Cow position: chr29:19949437-19949341 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 80
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 191-277
Cow position: chr29:11135482-11135568 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 75
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.