Cow genome map

Conread name: Ova1-OVRM10075A05

Conread position: 60-276
Cow position: chr5:32086760-32086976 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 42, 53

Conread position: 75-262
Cow position: chr5:34922717-34922900 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 135, 25

Conread position: 75-271
Cow position: chr5:10255237-10255049 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 121, 24

Conread position: 75-285
Cow position: chr5:49341782-49341986 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 35, 121

Conread position: 75-286
Cow position: chr5:41294355-41294142 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 148
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 13, 63

Conread position: 75-302
Cow position: chr5:26723723-26723495 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 24, 18

Conread position: 76-286
Cow position: chr5:52108005-52108206 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 30, 126

Conread position: 77-186
Cow position: chr5:36415877-36415768 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 34

Conread position: 77-286
Cow position: chr5:23678432-23678640 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 16, 33

Conread position: 80-190
Cow position: chr5:9859134-9859241 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 80-256
Cow position: chr5:73536849-73536680 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 80-273
Cow position: chr5:60595870-60596055 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 80-286
Cow position: chr5:24069650-24069452 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 133, 10

Conread position: 80-286
Cow position: chr5:24136974-24136777 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 13, 0

Conread position: 80-286
Cow position: chr5:29149141-29148950 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 80-286
Cow position: chr5:38647896-38647702 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 163
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 12, 0

Conread position: 80-300
Cow position: chr5:32976003-32975809 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 80-324
Cow position: chr5:31640692-31640448 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 133, 51

Conread position: 80-330
Cow position: chr5:46421841-46421607 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 184
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 25, 0

Conread position: 81-286
Cow position: chr5:56485331-56485136 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 108, 14

Conread position: 82-288
Cow position: chr5:38382535-38382739 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 110, 30

Conread position: 84-305
Cow position: chr5:28324600-28324380 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 13, 29

Conread position: 86-286
Cow position: chr5:59325582-59325780 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 139
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 126, 22

Conread position: 87-287
Cow position: chr5:57303009-57302826 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 88-206
Cow position: chr5:59872797-59872916 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 22, 12

Conread position: 88-240
Cow position: chr5:36207307-36207455 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 101, 20

Conread position: 88-302
Cow position: chr5:4956347-4956567 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 116, 24

Conread position: 88-324
Cow position: chr5:53855954-53855729 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 212, 25

Conread position: 88-331
Cow position: chr5:34116224-34115994 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 89-271
Cow position: chr5:56428057-56428239 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 94, 22

Conread position: 89-285
Cow position: chr5:53175009-53175195 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 14, 73

Conread position: 89-286
Cow position: chr5:34301180-34300974 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 165
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 114, 23

Conread position: 89-316
Cow position: chr5:29912671-29912455 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 209, 11

Conread position: 90-274
Cow position: chr5:33256221-33256400 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 25, 0

Conread position: 90-276
Cow position: chr5:44874455-44874265 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 98, 15

Conread position: 92-286
Cow position: chr5:54311587-54311398 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 16, 0

Conread position: 93-286
Cow position: chr5:58452626-58452442 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 95-265
Cow position: chr5:20551329-20551497 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 95-280
Cow position: chr5:50800003-50799815 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 75, 20

Conread position: 95-284
Cow position: chr5:3677956-3677784 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 95-287
Cow position: chr5:29860601-29860393 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 74, 10

Conread position: 98-286
Cow position: chr5:35647601-35647405 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 79, 13

Conread position: 99-195
Cow position: chr5:63991649-63991743 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 102-286
Cow position: chr5:58555379-58555199 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 17, 0

Conread position: 105-305
Cow position: chr5:57156079-57156268 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 108-267
Cow position: chr5:29831299-29831462 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 136
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 73, 0

Conread position: 111-205
Cow position: chr5:15001847-15001753 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 111-274
Cow position: chr5:38420823-38420672 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 111-284
Cow position: chr5:14354307-14354139 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 20, 0

Conread position: 111-286
Cow position: chr5:4166880-4166704 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 143
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 44, 140

Conread position: 111-286
Cow position: chr5:31975747-31975581 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 111-286
Cow position: chr5:49440637-49440809 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 68, 118

Conread position: 111-286
Cow position: chr5:50822017-50821845 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 52, 8

Conread position: 111-286
Cow position: chr5:54767668-54767847 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 97, 0

Conread position: 111-286
Cow position: chr5:55850115-55849944 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 141
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 60, 25

Conread position: 111-286
Cow position: chr5:56539474-56539311 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 111-286
Cow position: chr5:58447043-58446869 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 94, 0

Conread position: 111-286
Cow position: chr5:63987202-63987383 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 95, 173

Conread position: 111-286
Cow position: chr5:66238077-66237898 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 111-288
Cow position: chr5:61912077-61912246 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 111-289
Cow position: chr5:8973020-8973191 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 111-291
Cow position: chr5:52887043-52887224 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 125

Conread position: 111-302
Cow position: chr5:39447310-39447488 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 111-303
Cow position: chr5:25531443-25531258 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 90, 0

Conread position: 112-266
Cow position: chr5:51018921-51018759 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 139

Conread position: 112-285
Cow position: chr5:41545653-41545833 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 67, 44

Conread position: 112-285
Cow position: chr5:60598973-60599141 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 104, 59

Conread position: 112-286
Cow position: chr5:23168587-23168764 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 112-286
Cow position: chr5:43992564-43992386 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 142
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 96, 0

Conread position: 112-286
Cow position: chr5:45037477-45037312 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 112-302
Cow position: chr5:25020542-25020720 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 113-283
Cow position: chr5:50762455-50762297 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 113-302
Cow position: chr5:18091234-18091051 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 113-302
Cow position: chr5:46322572-46322756 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 72, 21

Conread position: 113-312
Cow position: chr5:61875767-61875573 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 191, 64

Conread position: 114-286
Cow position: chr5:51490005-51490186 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 68, 141

Conread position: 115-286
Cow position: chr5:31434514-31434349 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 93, 27

Conread position: 118-286
Cow position: chr5:44726103-44726272 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 85, 0

Conread position: 135-286
Cow position: chr5:64591880-64592033 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 137-313
Cow position: chr5:57737310-57737135 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 151, 0

Conread position: 145-310
Cow position: chr5:59115583-59115422 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 69, 45

Conread position: 154-308
Cow position: chr5:43929543-43929696 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 159-291
Cow position: chr5:55129532-55129401 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 129, 0

Conread position: 166-286
Cow position: chr5:1090640-1090760 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 166-286
Cow position: chr5:4709968-4710090 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 172-314
Cow position: chr5:41981544-41981402 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 179-286
Cow position: chr5:49207157-49207265 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 181-305
Cow position: chr5:32338799-32338925 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 106, 47

Conread position: 190-286
Cow position: chr5:21721312-21721408 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 190-286
Cow position: chr5:34288094-34288191 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 0

Show alignments to all cow chromosomes.