Cow genome map
| Conread name: | Ova1-OVRM10078G07 |
| Conread position: | 6-366 |
| Cow position: | chr12:15951764-15951413 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 70 |
| Conread position: | 7-277 |
| Cow position: | chr12:21883506-21883779 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 29, 226 |
| Conread position: | 7-357 |
| Cow position: | chr12:27933459-27933108 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 19 |
| Conread position: | 7-357 |
| Cow position: | chr12:43031892-43031545 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 130 |
| Conread position: | 7-361 |
| Cow position: | chr12:21207179-21207536 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 7-361 |
| Cow position: | chr12:21255167-21254814 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 146 |
| Conread position: | 7-361 |
| Cow position: | chr12:21426187-21426535 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 78 |
| Conread position: | 7-361 |
| Cow position: | chr12:37558041-37558396 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 331 |
| Conread position: | 7-388 |
| Cow position: | chr12:32653029-32653413 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 376 |
| Conread position: | 7-648 |
| Cow position: | chr12:3360395-3361064 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 449 |
| Conread position: | 8-357 |
| Cow position: | chr12:1401977-1402328 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 13 |
| Conread position: | 8-357 |
| Cow position: | chr12:6407159-6406808 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 117 |
| Conread position: | 8-357 |
| Cow position: | chr12:11097724-11098079 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 8-361 |
| Cow position: | chr12:22206257-22205905 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 83 |
| Conread position: | 8-361 |
| Cow position: | chr12:25101581-25101220 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 183 |
| Conread position: | 8-367 |
| Cow position: | chr12:2282031-2282394 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 247 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 28, 42 |
| Conread position: | 8-665 |
| Cow position: | chr12:42860332-42859653 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 662 |
| Conread position: | 9-364 |
| Cow position: | chr12:8678635-8678277 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 15-402 |
| Cow position: | chr12:26141303-26141697 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 191 |
| Conread position: | 32-320 |
| Cow position: | chr12:252549-252262 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 127 |
| Conread position: | 36-363 |
| Cow position: | chr12:1137109-1137429 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 155, 13 |
| Conread position: | 41-361 |
| Cow position: | chr12:21197349-21197668 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 0 |
| Conread position: | 43-361 |
| Cow position: | chr12:20998600-20998278 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 45 |
| Conread position: | 46-407 |
| Cow position: | chr12:3630716-3631064 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 261, 29 |
| Conread position: | 54-368 |
| Cow position: | chr12:2840055-2839745 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 57 |
| Conread position: | 81-323 |
| Cow position: | chr12:26947710-26947456 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 134, 207 |
| Conread position: | 81-361 |
| Cow position: | chr12:22332176-22332463 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 142, 85 |
| Conread position: | 83-654 |
| Cow position: | chr12:21941338-21941931 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 0 |
| Conread position: | 102-357 |
| Cow position: | chr12:8310762-8311023 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 102-665 |
| Cow position: | chr12:2376-2973 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 580 |
| Conread position: | 102-665 |
| Cow position: | chr12:21901531-21902111 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 145 |
| Conread position: | 111-665 |
| Cow position: | chr12:14663023-14662459 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 113 |
| Conread position: | 112-373 |
| Cow position: | chr12:22026346-22026604 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 200, 100 |
| Conread position: | 112-375 |
| Cow position: | chr12:48404638-48404900 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 200, 102 |
| Conread position: | 139-357 |
| Cow position: | chr12:28766401-28766179 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 89, 108 |
| Conread position: | 150-323 |
| Cow position: | chr12:42420784-42420612 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 207-361 |
| Cow position: | chr12:45261289-45261456 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 225-357 |
| Cow position: | chr12:601350-601213 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 313-665 |
| Cow position: | chr12:21254835-21254482 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 36 |
| Conread position: | 356-648 |
| Cow position: | chr12:32653407-32653704 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 78 |
| Conread position: | 358-644 |
| Cow position: | chr12:21207559-21207850 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 76 |
| Conread position: | 362-665 |
| Cow position: | chr12:11098110-11098417 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 73 |
| Conread position: | 362-665 |
| Cow position: | chr12:22205878-22205573 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 72 |
| Conread position: | 362-665 |
| Cow position: | chr12:25101193-25100887 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 72 |
| Conread position: | 362-665 |
| Cow position: | chr12:27933077-27932771 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 72 |
| Conread position: | 362-665 |
| Cow position: | chr12:28766152-28765845 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 72 |
| Conread position: | 363-648 |
| Cow position: | chr12:8678253-8677962 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 71 |
| Conread position: | 363-665 |
| Cow position: | chr12:2282416-2282720 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 71 |
| Conread position: | 363-665 |
| Cow position: | chr12:45261484-45261797 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 74 |
| Conread position: | 367-665 |
| Cow position: | chr12:252183-251883 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 67 |
| Conread position: | 382-660 |
| Cow position: | chr12:22332508-22332793 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 216 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 39, 52 |
| Conread position: | 382-664 |
| Cow position: | chr12:20998233-20997958 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 40, 52 |
| Conread position: | 382-665 |
| Cow position: | chr12:6406759-6406474 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 51 |
| Conread position: | 450-648 |
| Cow position: | chr12:48405233-48405432 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 484-665 |
| Cow position: | chr12:33986158-33986336 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 161, 0 |
Show alignments to all cow chromosomes.