Cow genome map


           Conread name:
           Ova1-OVRM10078G07
        

               Conread position:
               1-587
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 35
               

               Conread position:
               2-357
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 82
               

               Conread position:
               4-374
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 71
               

               Conread position:
               6-661
               

               Cow position:
               
               

               Alignm length:
               682
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 70
               

               Conread position:
               7-349
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 19
               

               Conread position:
               7-350
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               305, 162
               

               Conread position:
               7-357
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 119
               

               Conread position:
               7-361
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               7-407
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 59
               

               Conread position:
               7-409
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 64
               

               Conread position:
               7-414
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 84
               

               Conread position:
               7-665
               

               Cow position:
               
               

               Alignm length:
               681
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 309
               

               Conread position:
               7-665
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               491
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 671
               

               Conread position:
               7-665
               

               Cow position:
               
               

               Alignm length:
               701
               

               Alignm identity:
               477
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 253
               

               Conread position:
               7-665
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 221
               

               Conread position:
               7-665
               

               Cow position:
               
               

               Alignm length:
               678
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 218
               

               Conread position:
               7-665
               

               Cow position:
               
               

               Alignm length:
               671
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 255
               

               Conread position:
               8-345
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 159
               

               Conread position:
               8-349
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               8-350
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 73
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 128
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 19
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 19
               

               Conread position:
               8-400
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 45
               

               Conread position:
               8-467
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 368
               

               Conread position:
               8-648
               

               Cow position:
               
               

               Alignm length:
               661
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 84
               

               Conread position:
               8-665
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               490
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 84
               

               Conread position:
               11-636
               

               Cow position:
               
               

               Alignm length:
               635
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 7
               

               Conread position:
               11-644
               

               Cow position:
               
               

               Alignm length:
               645
               

               Alignm identity:
               398
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               41, 97
               

               Conread position:
               13-358
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 112
               

               Conread position:
               14-554
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               22, 60
               

               Conread position:
               15-309
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               204
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               32-363
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               280, 185
               

               Conread position:
               32-665
               

               Cow position:
               
               

               Alignm length:
               672
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               281, 196
               

               Conread position:
               33-665
               

               Cow position:
               
               

               Alignm length:
               673
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 259
               

               Conread position:
               37-664
               

               Cow position:
               
               

               Alignm length:
               657
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 109
               

               Conread position:
               41-356
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 36
               

               Conread position:
               41-554
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               341
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               27, 11
               

               Conread position:
               42-338
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               22, 128
               

               Conread position:
               50-361
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               53-357
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               259, 161
               

               Conread position:
               53-358
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               159, 40
               

               Conread position:
               56-374
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               234
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               114, 145
               

               Conread position:
               57-664
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               255, 19
               

               Conread position:
               76-357
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 12
               

               Conread position:
               81-665
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 288
               

               Conread position:
               81-665
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 122
               

               Conread position:
               89-665
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 140
               

               Conread position:
               102-361
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               102-366
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 229
               

               Conread position:
               102-614
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 33
               

               Conread position:
               112-361
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               112-654
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               249, 23
               

               Conread position:
               119-361
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 0
               

               Conread position:
               121-402
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 0
               

               Conread position:
               122-366
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               192
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               186, 24
               

               Conread position:
               135-273
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               226-367
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               329-648
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 105
               

               Conread position:
               356-665
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 78
               

               Conread position:
               361-559
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               55, 71
               

               Conread position:
               362-647
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 72
               

               Conread position:
               362-648
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 71
               

               Conread position:
               362-648
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 72
               

               Conread position:
               362-665
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 19
               

               Conread position:
               362-665
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 72
               

               Conread position:
               363-665
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 15
               

               Conread position:
               363-665
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 18
               

               Conread position:
               363-665
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 69
               

               Conread position:
               363-665
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 69
               

               Conread position:
               367-665
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 69
               

               Conread position:
               367-665
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 69
               

               Conread position:
               376-665
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 58
               

               Conread position:
               382-664
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               78, 51
               

               Conread position:
               382-665
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 52
               

               Conread position:
               450-646
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               33, 15
               

               Conread position:
               450-648
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               41, 144
               

               Conread position:
               480-665
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               537-665
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               539-665
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               99, 0
               
Show alignments to all cow chromosomes.