Cow genome map

Conread name: Ova1-OVRM10078G07

Conread position: 1-311
Cow position:
Alignm length: 319
Alignm identity: 221
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 59, 14

Conread position: 3-380
Cow position:
Alignm length: 383
Alignm identity: 242
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 67

Conread position: 3-380
Cow position:
Alignm length: 383
Alignm identity: 242
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 67

Conread position: 3-634
Cow position:
Alignm length: 671
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 144

Conread position: 3-665
Cow position:
Alignm length: 689
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 73

Conread position: 4-357
Cow position:
Alignm length: 361
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 6-307
Cow position:
Alignm length: 303
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 104

Conread position: 6-319
Cow position:
Alignm length: 315
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 70

Conread position: 6-531
Cow position:
Alignm length: 549
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 467

Conread position: 6-665
Cow position:
Alignm length: 686
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 88

Conread position: 7-243
Cow position:
Alignm length: 238
Alignm identity: 158
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 7-287
Cow position:
Alignm length: 282
Alignm identity: 190
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 29, 192

Conread position: 7-305
Cow position:
Alignm length: 300
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 68

Conread position: 7-339
Cow position:
Alignm length: 340
Alignm identity: 241
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 29, 105

Conread position: 7-361
Cow position:
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 84

Conread position: 7-388
Cow position:
Alignm length: 401
Alignm identity: 277
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 33, 29

Conread position: 7-409
Cow position:
Alignm length: 410
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 70

Conread position: 7-409
Cow position:
Alignm length: 411
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 190

Conread position: 7-664
Cow position:
Alignm length: 692
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 81

Conread position: 7-665
Cow position:
Alignm length: 686
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 338

Conread position: 8-244
Cow position:
Alignm length: 239
Alignm identity: 163
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 14, 0

Conread position: 8-357
Cow position:
Alignm length: 351
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 302

Conread position: 8-357
Cow position:
Alignm length: 356
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 8-357
Cow position:
Alignm length: 361
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 63

Conread position: 8-357
Cow position:
Alignm length: 357
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 19

Conread position: 8-357
Cow position:
Alignm length: 356
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 209

Conread position: 8-357
Cow position:
Alignm length: 356
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 8-357
Cow position:
Alignm length: 358
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 293

Conread position: 8-665
Cow position:
Alignm length: 696
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 84

Conread position: 9-665
Cow position:
Alignm length: 684
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 18

Conread position: 15-357
Cow position:
Alignm length: 352
Alignm identity: 244
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 13, 61

Conread position: 21-357
Cow position:
Alignm length: 339
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 0

Conread position: 32-357
Cow position:
Alignm length: 332
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 0

Conread position: 32-651
Cow position:
Alignm length: 632
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 139

Conread position: 32-654
Cow position:
Alignm length: 656
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 119

Conread position: 35-366
Cow position:
Alignm length: 337
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 20

Conread position: 36-357
Cow position:
Alignm length: 328
Alignm identity: 220
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 8, 32

Conread position: 38-360
Cow position:
Alignm length: 332
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 73

Conread position: 38-665
Cow position:
Alignm length: 646
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 127

Conread position: 39-356
Cow position:
Alignm length: 326
Alignm identity: 226
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 81, 66

Conread position: 42-648
Cow position:
Alignm length: 640
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 533

Conread position: 43-361
Cow position:
Alignm length: 325
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 43-652
Cow position:
Alignm length: 638
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 13

Conread position: 43-665
Cow position:
Alignm length: 654
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 185

Conread position: 44-366
Cow position:
Alignm length: 327
Alignm identity: 217
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 48

Conread position: 46-351
Cow position:
Alignm length: 311
Alignm identity: 214
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 185, 59

Conread position: 46-519
Cow position:
Alignm length: 492
Alignm identity: 321
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 298, 47

Conread position: 46-648
Cow position:
Alignm length: 634
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 352

Conread position: 52-318
Cow position:
Alignm length: 269
Alignm identity: 183
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 28, 183

Conread position: 53-320
Cow position:
Alignm length: 272
Alignm identity: 194
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 23, 264

Conread position: 60-290
Cow position:
Alignm length: 232
Alignm identity: 154
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 12, 175

Conread position: 61-596
Cow position:
Alignm length: 564
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 80

Conread position: 74-361
Cow position:
Alignm length: 293
Alignm identity: 198
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 233, 6

Conread position: 76-321
Cow position:
Alignm length: 251
Alignm identity: 170
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 105, 95

Conread position: 77-626
Cow position:
Alignm length: 575
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 153

Conread position: 79-409
Cow position:
Alignm length: 339
Alignm identity: 231
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 139, 0

Conread position: 88-361
Cow position:
Alignm length: 279
Alignm identity: 201
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 224, 0

Conread position: 91-665
Cow position:
Alignm length: 605
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 11

Conread position: 93-361
Cow position:
Alignm length: 279
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 18

Conread position: 94-348
Cow position:
Alignm length: 256
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 189

Conread position: 94-361
Cow position:
Alignm length: 276
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 5

Conread position: 94-385
Cow position:
Alignm length: 294
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 273

Conread position: 94-665
Cow position:
Alignm length: 607
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 87

Conread position: 99-346
Cow position:
Alignm length: 254
Alignm identity: 185
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 125, 0

Conread position: 102-307
Cow position:
Alignm length: 208
Alignm identity: 164
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 44, 49

Conread position: 102-630
Cow position:
Alignm length: 557
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 67

Conread position: 103-661
Cow position:
Alignm length: 591
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 96

Conread position: 112-361
Cow position:
Alignm length: 256
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 220

Conread position: 112-374
Cow position:
Alignm length: 267
Alignm identity: 175
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 189, 121

Conread position: 120-655
Cow position:
Alignm length: 553
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 312

Conread position: 123-665
Cow position:
Alignm length: 580
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 46

Conread position: 124-357
Cow position:
Alignm length: 239
Alignm identity: 171
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 188, 0

Conread position: 129-361
Cow position:
Alignm length: 240
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 67

Conread position: 163-665
Cow position:
Alignm length: 536
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 133

Conread position: 178-650
Cow position:
Alignm length: 493
Alignm identity: 330
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 118, 36

Conread position: 185-358
Cow position:
Alignm length: 179
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 122, 0

Conread position: 218-361
Cow position:
Alignm length: 149
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 95, 0

Conread position: 353-665
Cow position:
Alignm length: 321
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 81

Conread position: 356-648
Cow position:
Alignm length: 300
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 78

Conread position: 356-665
Cow position:
Alignm length: 316
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 288

Conread position: 356-665
Cow position:
Alignm length: 317
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 78

Conread position: 358-665
Cow position:
Alignm length: 315
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 76

Conread position: 358-665
Cow position:
Alignm length: 317
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 74

Conread position: 362-643
Cow position:
Alignm length: 289
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 72

Conread position: 362-647
Cow position:
Alignm length: 293
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 72

Conread position: 362-661
Cow position:
Alignm length: 307
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 72

Conread position: 362-665
Cow position:
Alignm length: 311
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 72

Conread position: 362-665
Cow position:
Alignm length: 309
Alignm identity: 222
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 52, 22

Conread position: 362-665
Cow position:
Alignm length: 311
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 19

Conread position: 362-665
Cow position:
Alignm length: 311
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 72

Conread position: 362-665
Cow position:
Alignm length: 308
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 72

Conread position: 362-665
Cow position:
Alignm length: 311
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 72

Conread position: 362-665
Cow position:
Alignm length: 310
Alignm identity: 214
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 59, 134

Conread position: 362-665
Cow position:
Alignm length: 306
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 72

Conread position: 363-651
Cow position:
Alignm length: 296
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 18

Conread position: 363-665
Cow position:
Alignm length: 308
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 71

Conread position: 363-665
Cow position:
Alignm length: 311
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 71

Conread position: 363-665
Cow position:
Alignm length: 310
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 18

Conread position: 363-665
Cow position:
Alignm length: 310
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 65

Conread position: 366-665
Cow position:
Alignm length: 307
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 66

Conread position: 367-665
Cow position:
Alignm length: 305
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 67

Conread position: 367-665
Cow position:
Alignm length: 308
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 56

Conread position: 382-660
Cow position:
Alignm length: 283
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 52

Conread position: 387-665
Cow position:
Alignm length: 287
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 51

Conread position: 395-665
Cow position:
Alignm length: 277
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 38

Conread position: 396-665
Cow position:
Alignm length: 271
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 38

Conread position: 421-665
Cow position:
Alignm length: 247
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 14

Conread position: 450-665
Cow position:
Alignm length: 217
Alignm identity: 167
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 27, 22

Conread position: 456-665
Cow position:
Alignm length: 210
Alignm identity: 160
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 108, 0

Conread position: 465-648
Cow position:
Alignm length: 187
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 135

Conread position: 502-643
Cow position:
Alignm length: 142
Alignm identity: 119
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 22, 0

Show alignments to all cow chromosomes.