Cow genome map

Conread name: Ova1-OVRM10078G07

Conread position: 1-361
Cow position: chr15:4630774-4630410 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 253
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 5, 21

Conread position: 1-361
Cow position: chr15:32723042-32722686 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 249
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 35, 170

Conread position: 1-361
Cow position: chr15:36641770-36642125 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 77

Conread position: 2-357
Cow position: chr15:327549-327902 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 37

Conread position: 2-575
Cow position: chr15:317194-316609 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 25

Conread position: 3-307
Cow position: chr15:6456425-6456731 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 50

Conread position: 3-342
Cow position: chr15:1763228-1763571 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 239
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 31, 73

Conread position: 3-357
Cow position: chr15:2923654-2924011 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 73

Conread position: 3-367
Cow position: chr15:6554718-6554350 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 354

Conread position: 3-665
Cow position: chr15:51799887-51800555 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 35

Conread position: 4-357
Cow position: chr15:2011231-2011578 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 30

Conread position: 4-665
Cow position: chr15:32692687-32693373 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 185

Conread position: 6-350
Cow position: chr15:6387152-6386806 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 77

Conread position: 6-374
Cow position: chr15:32680414-32680036 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 267
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 30, 47

Conread position: 6-665
Cow position: chr15:35649057-35648405 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 30

Conread position: 6-665
Cow position: chr15:35734610-35735286 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 63

Conread position: 7-225
Cow position: chr15:2640837-2641056 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 143
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 7-254
Cow position: chr15:8673408-8673161 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 213

Conread position: 7-276
Cow position: chr15:4143618-4143352 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 182
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 29, 78

Conread position: 7-350
Cow position: chr15:7186898-7186550 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 243

Conread position: 7-356
Cow position: chr15:55347-55694 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 158

Conread position: 7-361
Cow position: chr15:2593659-2593311 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 216

Conread position: 7-361
Cow position: chr15:7544020-7544378 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 59

Conread position: 7-361
Cow position: chr15:13428187-13428537 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 192

Conread position: 7-361
Cow position: chr15:20748551-20748914 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 7-361
Cow position: chr15:32709686-32710043 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 248
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 29, 194

Conread position: 7-363
Cow position: chr15:1781401-1781753 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 250
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 29, 178

Conread position: 7-363
Cow position: chr15:7259766-7260128 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 130

Conread position: 7-367
Cow position: chr15:50144637-50145008 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 345

Conread position: 7-409
Cow position: chr15:11598973-11598567 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 269

Conread position: 7-409
Cow position: chr15:21878215-21877810 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 218

Conread position: 7-409
Cow position: chr15:22204975-22204566 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 7-409
Cow position: chr15:22920274-22920672 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 128

Conread position: 7-665
Cow position: chr15:689957-690620 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 144

Conread position: 7-665
Cow position: chr15:1520008-1519319 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 456

Conread position: 7-665
Cow position: chr15:2648515-2647825 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 78

Conread position: 7-665
Cow position: chr15:17081041-17080371 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 192

Conread position: 7-665
Cow position: chr15:18268836-18268156 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 152

Conread position: 8-349
Cow position: chr15:4681365-4681703 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 152

Conread position: 8-357
Cow position: chr15:12422024-12421672 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 8-357
Cow position: chr15:18575863-18576218 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 19

Conread position: 8-357
Cow position: chr15:24294238-24294585 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 58

Conread position: 8-357
Cow position: chr15:42490345-42490699 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 185

Conread position: 8-357
Cow position: chr15:42935857-42936208 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 128

Conread position: 8-357
Cow position: chr15:44068938-44069287 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 83

Conread position: 8-357
Cow position: chr15:51215732-51216088 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 8-371
Cow position: chr15:35754678-35754319 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 13

Conread position: 8-645
Cow position: chr15:50124795-50124125 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 112

Conread position: 8-665
Cow position: chr15:2075799-2076478 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 153

Conread position: 8-665
Cow position: chr15:4764354-4765036 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 223

Conread position: 8-665
Cow position: chr15:15347981-15347289 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 83

Conread position: 8-665
Cow position: chr15:18333683-18332998 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 84

Conread position: 9-357
Cow position: chr15:17040109-17039758 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 119

Conread position: 9-361
Cow position: chr15:7933121-7933473 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 10

Conread position: 9-647
Cow position: chr15:370529-369866 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 75

Conread position: 9-648
Cow position: chr15:4384415-4385084 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 360

Conread position: 10-350
Cow position: chr15:7836384-7836731 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 0

Conread position: 10-358
Cow position: chr15:2006683-2007035 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 231
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 31, 103

Conread position: 10-578
Cow position: chr15:49676188-49676760 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 28

Conread position: 13-356
Cow position: chr15:28490988-28490653 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 184

Conread position: 15-380
Cow position: chr15:6594676-6594308 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 66

Conread position: 17-409
Cow position: chr15:1771650-1772046 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 108

Conread position: 32-260
Cow position: chr15:21666854-21666627 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 32-298
Cow position: chr15:17683026-17682765 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 174
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 32-320
Cow position: chr15:525686-525402 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 32-648
Cow position: chr15:4677669-4678293 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 194

Conread position: 32-648
Cow position: chr15:32495218-32494569 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 33

Conread position: 32-665
Cow position: chr15:4649012-4649657 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 52

Conread position: 32-665
Cow position: chr15:37391672-37392327 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 426

Conread position: 36-665
Cow position: chr15:17291623-17292269 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 5

Conread position: 37-320
Cow position: chr15:2902975-2902698 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 202
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 261, 54

Conread position: 37-360
Cow position: chr15:6156789-6156472 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 84

Conread position: 37-665
Cow position: chr15:31358073-31358716 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 224

Conread position: 39-357
Cow position: chr15:21448249-21448555 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 233
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 36, 64

Conread position: 39-364
Cow position: chr15:10479516-10479200 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 233
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 81, 38

Conread position: 39-374
Cow position: chr15:21816569-21816236 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 160

Conread position: 39-665
Cow position: chr15:17272208-17271566 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 275

Conread position: 40-233
Cow position: chr15:52635339-52635524 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 128, 0

Conread position: 41-348
Cow position: chr15:38957853-38957536 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 220
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 175, 98

Conread position: 43-362
Cow position: chr15:44827990-44828314 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 0

Conread position: 43-367
Cow position: chr15:10887786-10888114 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 161

Conread position: 45-385
Cow position: chr15:8098663-8099009 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 174

Conread position: 46-357
Cow position: chr15:490975-490665 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 215
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 73, 12

Conread position: 46-358
Cow position: chr15:7927808-7928120 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 207
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 14, 66

Conread position: 46-361
Cow position: chr15:324105-324445 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 228
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 85, 0

Conread position: 46-388
Cow position: chr15:40104635-40104993 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 242
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 153, 10

Conread position: 46-577
Cow position: chr15:45885995-45886535 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 18

Conread position: 46-648
Cow position: chr15:1662577-1663186 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 33

Conread position: 46-654
Cow position: chr15:17787965-17787343 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 38

Conread position: 47-357
Cow position: chr15:19738868-19738559 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 44

Conread position: 49-227
Cow position: chr15:7541159-7541336 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 122
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 21, 0

Conread position: 49-665
Cow position: chr15:7233501-7234132 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 31

Conread position: 51-381
Cow position: chr15:38979103-38979437 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 227
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 261, 32

Conread position: 51-665
Cow position: chr15:14583415-14582787 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 148

Conread position: 57-361
Cow position: chr15:24793245-24793552 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 277

Conread position: 63-665
Cow position: chr15:443810-444440 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 223

Conread position: 65-640
Cow position: chr15:4960859-4961440 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 46

Conread position: 70-357
Cow position: chr15:3262201-3261913 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 120

Conread position: 70-374
Cow position: chr15:685367-685682 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 218
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 43, 55

Conread position: 77-250
Cow position: chr15:6184322-6184485 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 77-346
Cow position: chr15:1236613-1236889 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 196
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 43, 34

Conread position: 81-361
Cow position: chr15:6371625-6371342 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 110

Conread position: 81-361
Cow position: chr15:8001034-8000746 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 0

Conread position: 81-665
Cow position: chr15:10787876-10787298 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 147

Conread position: 83-370
Cow position: chr15:18023560-18023274 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 183
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 8

Conread position: 85-409
Cow position: chr15:4195687-4196010 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 225
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 55, 40

Conread position: 86-665
Cow position: chr15:6278038-6277429 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 141

Conread position: 88-665
Cow position: chr15:42321195-42320590 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 588

Conread position: 91-361
Cow position: chr15:41365406-41365678 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 11

Conread position: 94-665
Cow position: chr15:35747520-35748124 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 271

Conread position: 95-361
Cow position: chr15:21960740-21961011 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 0

Conread position: 97-330
Cow position: chr15:16540548-16540773 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 87, 0

Conread position: 99-361
Cow position: chr15:6472664-6472412 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 200
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 214, 36

Conread position: 101-415
Cow position: chr15:17219628-17219319 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 203
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 194, 84

Conread position: 102-351
Cow position: chr15:6650812-6650570 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 114, 132

Conread position: 102-366
Cow position: chr15:4794916-4795183 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 131

Conread position: 102-385
Cow position: chr15:6077972-6078255 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 202
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 128, 30

Conread position: 102-409
Cow position: chr15:36970158-36970471 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 219
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 210, 0

Conread position: 112-294
Cow position: chr15:25135225-25135041 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 123, 15

Conread position: 112-311
Cow position: chr15:25789946-25789747 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 159
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 112-357
Cow position: chr15:3843573-3843329 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 169
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 123, 45

Conread position: 112-357
Cow position: chr15:23157585-23157333 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 190
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 104, 42

Conread position: 112-362
Cow position: chr15:36648158-36648411 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 0

Conread position: 119-361
Cow position: chr15:4670675-4670917 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 96

Conread position: 121-647
Cow position: chr15:7894946-7894414 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 231

Conread position: 122-625
Cow position: chr15:32286533-32287030 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 332
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 199, 65

Conread position: 123-350
Cow position: chr15:4921403-4921631 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 196, 101

Conread position: 126-340
Cow position: chr15:3038267-3038040 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 100, 0

Conread position: 153-357
Cow position: chr15:4733149-4733356 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 164
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 72, 115

Conread position: 161-349
Cow position: chr15:8749725-8749919 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 23, 0

Conread position: 211-361
Cow position: chr15:4170347-4170195 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 125
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 98, 6

Conread position: 220-665
Cow position: chr15:53338391-53338854 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 38

Conread position: 307-665
Cow position: chr15:51671831-51672178 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 16

Conread position: 311-648
Cow position: chr15:36648389-36648724 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 12

Conread position: 329-651
Cow position: chr15:12421674-12421346 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 105

Conread position: 354-654
Cow position: chr15:32733267-32732966 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 209
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 106, 154

Conread position: 356-664
Cow position: chr15:20748935-20749245 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 78

Conread position: 356-664
Cow position: chr15:29009362-29009669 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 78

Conread position: 356-665
Cow position: chr15:1772018-1772329 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 78

Conread position: 356-665
Cow position: chr15:1781773-1782085 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 78

Conread position: 358-665
Cow position: chr15:1834939-1834630 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 76

Conread position: 358-665
Cow position: chr15:4811845-4812151 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 216
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 63, 51

Conread position: 358-665
Cow position: chr15:6472389-6472086 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 76

Conread position: 362-621
Cow position: chr15:4921669-4921932 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 194
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 55, 70

Conread position: 362-643
Cow position: chr15:8749954-8750238 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 206
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 59, 19

Conread position: 362-647
Cow position: chr15:8099013-8099302 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 72

Conread position: 362-648
Cow position: chr15:7928150-7928436 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 199
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 97, 58

Conread position: 362-648
Cow position: chr15:42936239-42936530 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 70

Conread position: 362-665
Cow position: chr15:6554329-6554024 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 72

Conread position: 362-665
Cow position: chr15:19738528-19738223 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 181

Conread position: 362-665
Cow position: chr15:24294616-24294922 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 72

Conread position: 362-665
Cow position: chr15:38979444-38979750 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 72

Conread position: 362-665
Cow position: chr15:42490731-42491034 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 12

Conread position: 362-665
Cow position: chr15:44828340-44828645 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 72

Conread position: 363-643
Cow position: chr15:23157303-23157019 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 70

Conread position: 363-648
Cow position: chr15:3037984-3037697 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 24

Conread position: 363-648
Cow position: chr15:17039726-17039437 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 71

Conread position: 363-663
Cow position: chr15:25789441-25789140 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 11

Conread position: 363-665
Cow position: chr15:1763618-1763921 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 66

Conread position: 363-665
Cow position: chr15:4170167-4169868 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 18

Conread position: 363-665
Cow position: chr15:28490615-28490310 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 71

Conread position: 363-665
Cow position: chr15:41365706-41366010 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 69

Conread position: 364-564
Cow position: chr15:55728-55934 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 59, 70

Conread position: 367-665
Cow position: chr15:4733391-4733689 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 62

Conread position: 367-665
Cow position: chr15:7260158-7260456 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 37

Conread position: 367-665
Cow position: chr15:7522958-7522662 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 67

Conread position: 369-643
Cow position: chr15:3261875-3261603 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 202
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 52, 64

Conread position: 375-665
Cow position: chr15:21666208-21665916 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 59

Conread position: 379-665
Cow position: chr15:6156412-6156123 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 55

Conread position: 382-665
Cow position: chr15:4143278-4142987 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 215
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 39, 53

Conread position: 382-665
Cow position: chr15:18576265-18576544 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 212
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 39, 52

Conread position: 382-665
Cow position: chr15:36970469-36970755 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 52

Conread position: 384-646
Cow position: chr15:36627103-36626856 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 201
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 39, 22

Conread position: 395-665
Cow position: chr15:7922083-7921811 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 39

Conread position: 418-646
Cow position: chr15:24715810-24716039 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 174
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 14, 88

Conread position: 420-665
Cow position: chr15:51216173-51216419 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 13

Conread position: 435-648
Cow position: chr15:35754000-35753781 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 169
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 25, 0

Conread position: 450-665
Cow position: chr15:50146697-50146909 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 0

Conread position: 452-665
Cow position: chr15:21448922-21449141 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 146, 90

Conread position: 465-665
Cow position: chr15:6593309-6593114 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 474-665
Cow position: chr15:2924533-2924716 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 154
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 24, 0

Conread position: 550-665
Cow position: chr15:56206-56318 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 90, 0

Show alignments to all cow chromosomes.