Cow genome map


           Conread name:
           Ova1-OVRM10078G07
        

               Conread position:
               1-361
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 94
               

               Conread position:
               1-583
               

               Cow position:
               
               

               Alignm length:
               599
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 39
               

               Conread position:
               3-356
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 56
               

               Conread position:
               3-374
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               260
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               49, 34
               

               Conread position:
               3-665
               

               Cow position:
               
               

               Alignm length:
               675
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 58
               

               Conread position:
               4-363
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 18
               

               Conread position:
               5-194
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               13, 88
               

               Conread position:
               6-363
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 70
               

               Conread position:
               7-320
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 307
               

               Conread position:
               7-342
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 155
               

               Conread position:
               7-361
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 143
               

               Conread position:
               7-403
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               7-409
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               7-625
               

               Cow position:
               
               

               Alignm length:
               651
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 61
               

               Conread position:
               7-665
               

               Cow position:
               
               

               Alignm length:
               682
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 99
               

               Conread position:
               7-665
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 61
               

               Conread position:
               7-665
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 199
               

               Conread position:
               7-665
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               482
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 53
               

               Conread position:
               7-665
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 126
               

               Conread position:
               8-177
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               28, 83
               

               Conread position:
               8-350
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 333
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 18
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 70
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 64
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 18
               

               Conread position:
               8-367
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 45
               

               Conread position:
               8-367
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 53
               

               Conread position:
               8-648
               

               Cow position:
               
               

               Alignm length:
               663
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 24
               

               Conread position:
               8-648
               

               Cow position:
               
               

               Alignm length:
               649
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 280
               

               Conread position:
               8-665
               

               Cow position:
               
               

               Alignm length:
               666
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 83
               

               Conread position:
               8-665
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 291
               

               Conread position:
               8-665
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               486
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               304, 33
               

               Conread position:
               9-357
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 178
               

               Conread position:
               10-341
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 288
               

               Conread position:
               10-665
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 74
               

               Conread position:
               15-226
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               13, 60
               

               Conread position:
               18-514
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               336
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               10, 31
               

               Conread position:
               32-350
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               280, 156
               

               Conread position:
               32-357
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 50
               

               Conread position:
               32-665
               

               Cow position:
               
               

               Alignm length:
               670
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               280, 649
               

               Conread position:
               32-665
               

               Cow position:
               
               

               Alignm length:
               669
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 59
               

               Conread position:
               37-665
               

               Cow position:
               
               

               Alignm length:
               659
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               282, 638
               

               Conread position:
               37-665
               

               Cow position:
               
               

               Alignm length:
               660
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 366
               

               Conread position:
               38-665
               

               Cow position:
               
               

               Alignm length:
               641
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 45
               

               Conread position:
               39-648
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               281, 16
               

               Conread position:
               41-361
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 35
               

               Conread position:
               41-665
               

               Cow position:
               
               

               Alignm length:
               652
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 33
               

               Conread position:
               43-357
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               269, 182
               

               Conread position:
               44-375
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               268, 0
               

               Conread position:
               45-361
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               222
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               268, 20
               

               Conread position:
               46-357
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               73, 155
               

               Conread position:
               47-361
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               70, 26
               

               Conread position:
               47-648
               

               Cow position:
               
               

               Alignm length:
               633
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 177
               

               Conread position:
               51-375
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               65, 58
               

               Conread position:
               52-361
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               7, 21
               

               Conread position:
               52-665
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               483
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 12
               

               Conread position:
               54-357
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               219
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               10, 113
               

               Conread position:
               56-665
               

               Cow position:
               
               

               Alignm length:
               648
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 58
               

               Conread position:
               57-581
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               360
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               252, 11
               

               Conread position:
               60-374
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               148, 20
               

               Conread position:
               63-319
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               49, 123
               

               Conread position:
               77-357
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               242, 7
               

               Conread position:
               83-366
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               14, 183
               

               Conread position:
               84-367
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 161
               

               Conread position:
               94-357
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 23
               

               Conread position:
               94-665
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 197
               

               Conread position:
               94-665
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 353
               

               Conread position:
               94-665
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 282
               

               Conread position:
               102-361
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 157
               

               Conread position:
               102-361
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               19, 7
               

               Conread position:
               105-647
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               364
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               117, 52
               

               Conread position:
               112-374
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               201
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               52, 46
               

               Conread position:
               116-280
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               116-357
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 0
               

               Conread position:
               117-273
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               119-542
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               293
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               246, 66
               

               Conread position:
               201-366
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               212-665
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 26
               

               Conread position:
               244-665
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 111
               

               Conread position:
               356-665
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 78
               

               Conread position:
               358-665
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 39
               

               Conread position:
               358-665
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 63
               

               Conread position:
               362-648
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 72
               

               Conread position:
               362-648
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 72
               

               Conread position:
               362-665
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 72
               

               Conread position:
               362-665
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 72
               

               Conread position:
               362-665
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 72
               

               Conread position:
               362-665
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 72
               

               Conread position:
               362-665
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 70
               

               Conread position:
               363-555
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               95, 53
               

               Conread position:
               363-664
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 18
               

               Conread position:
               363-665
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 18
               

               Conread position:
               363-665
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 71
               

               Conread position:
               363-665
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 71
               

               Conread position:
               366-665
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 68
               

               Conread position:
               367-648
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 66
               

               Conread position:
               374-665
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               218
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               43, 58
               

               Conread position:
               393-571
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               65, 28
               
Show alignments to all cow chromosomes.