Cow genome map


           Conread name:
           Ova1-OVRM10078G07
        

               Conread position:
               3-361
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 73
               

               Conread position:
               7-244
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               7-260
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               7-357
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               305, 19
               

               Conread position:
               7-361
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 104
               

               Conread position:
               7-361
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               7-361
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 252
               

               Conread position:
               7-361
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 70
               

               Conread position:
               7-361
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 45
               

               Conread position:
               7-392
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 105
               

               Conread position:
               7-409
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 71
               

               Conread position:
               7-665
               

               Cow position:
               
               

               Alignm length:
               701
               

               Alignm identity:
               466
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 252
               

               Conread position:
               8-320
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 150
               

               Conread position:
               8-320
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 306
               

               Conread position:
               8-345
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 19
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               8-665
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 333
               

               Conread position:
               8-665
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               494
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 83
               

               Conread position:
               10-347
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               301, 26
               

               Conread position:
               10-367
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 100
               

               Conread position:
               13-661
               

               Cow position:
               
               

               Alignm length:
               683
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 187
               

               Conread position:
               15-357
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 229
               

               Conread position:
               15-409
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 343
               

               Conread position:
               36-286
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               210, 8
               

               Conread position:
               37-395
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               220
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               282, 131
               

               Conread position:
               39-366
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               56, 41
               

               Conread position:
               46-665
               

               Cow position:
               
               

               Alignm length:
               656
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 17
               

               Conread position:
               46-665
               

               Cow position:
               
               

               Alignm length:
               654
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 19
               

               Conread position:
               57-665
               

               Cow position:
               
               

               Alignm length:
               633
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 92
               

               Conread position:
               81-360
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 276
               

               Conread position:
               81-366
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               88-342
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               219, 14
               

               Conread position:
               90-665
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 318
               

               Conread position:
               94-356
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               94-361
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 52
               

               Conread position:
               101-402
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 104
               

               Conread position:
               101-636
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               341
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               160, 67
               

               Conread position:
               112-357
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               187
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               200, 74
               

               Conread position:
               112-358
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 183
               

               Conread position:
               112-361
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 99
               

               Conread position:
               112-361
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 34
               

               Conread position:
               112-615
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 114
               

               Conread position:
               112-665
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 48
               

               Conread position:
               113-361
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 125
               

               Conread position:
               115-665
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 342
               

               Conread position:
               115-665
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 342
               

               Conread position:
               116-357
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 198
               

               Conread position:
               123-357
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 0
               

               Conread position:
               138-358
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               170, 51
               

               Conread position:
               148-361
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               176, 26
               

               Conread position:
               148-418
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               163, 26
               

               Conread position:
               211-357
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               98, 21
               

               Conread position:
               218-361
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               240-665
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 9
               

               Conread position:
               356-648
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 78
               

               Conread position:
               356-665
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 29
               

               Conread position:
               356-665
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 78
               

               Conread position:
               358-665
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 29
               

               Conread position:
               358-665
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 76
               

               Conread position:
               362-665
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 73
               

               Conread position:
               362-665
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 19
               

               Conread position:
               362-665
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 72
               

               Conread position:
               362-665
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 72
               

               Conread position:
               362-665
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 72
               

               Conread position:
               362-665
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 72
               

               Conread position:
               362-665
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 72
               

               Conread position:
               362-665
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 73
               

               Conread position:
               363-621
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               53, 69
               

               Conread position:
               363-665
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 71
               

               Conread position:
               363-665
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 69
               

               Conread position:
               363-665
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 71
               

               Conread position:
               363-665
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 18
               

               Conread position:
               367-648
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 67
               

               Conread position:
               367-665
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 67
               

               Conread position:
               368-617
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               53, 13
               

               Conread position:
               383-648
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 51
               

               Conread position:
               408-665
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 23
               

               Conread position:
               411-648
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               49, 22
               

               Conread position:
               411-665
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 23
               

               Conread position:
               421-665
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               184
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               39, 12
               

               Conread position:
               428-665
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               182
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               6, 221
               

               Conread position:
               440-665
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               461-665
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               163
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               518-665
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               127, 0
               
Show alignments to all cow chromosomes.