Cow genome map


           Conread name:
           Ova1-OVRM10078G07
        

               Conread position:
               2-247
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               12, 84
               

               Conread position:
               4-357
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 11
               

               Conread position:
               5-611
               

               Cow position:
               
               

               Alignm length:
               633
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 84
               

               Conread position:
               6-665
               

               Cow position:
               
               

               Alignm length:
               668
               

               Alignm identity:
               472
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 78
               

               Conread position:
               7-361
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               250
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               29, 78
               

               Conread position:
               7-361
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 77
               

               Conread position:
               7-409
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 194
               

               Conread position:
               7-409
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 67
               

               Conread position:
               7-409
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               282
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               7-561
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 29
               

               Conread position:
               7-665
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               484
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 193
               

               Conread position:
               7-665
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 64
               

               Conread position:
               7-665
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               490
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 453
               

               Conread position:
               7-665
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 192
               

               Conread position:
               8-304
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 190
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               249
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               14, 73
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 76
               

               Conread position:
               8-361
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 85
               

               Conread position:
               8-369
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               249
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               8-643
               

               Cow position:
               
               

               Alignm length:
               658
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 38
               

               Conread position:
               8-648
               

               Cow position:
               
               

               Alignm length:
               667
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 84
               

               Conread position:
               8-665
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 675
               

               Conread position:
               9-665
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               495
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 666
               

               Conread position:
               14-361
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               248
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               22, 60
               

               Conread position:
               32-367
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 172
               

               Conread position:
               32-665
               

               Cow position:
               
               

               Alignm length:
               671
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               280, 648
               

               Conread position:
               39-613
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 36
               

               Conread position:
               43-260
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               45-665
               

               Cow position:
               
               

               Alignm length:
               655
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 130
               

               Conread position:
               46-371
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               166, 65
               

               Conread position:
               55-561
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               339
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               67, 56
               

               Conread position:
               59-367
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               253, 60
               

               Conread position:
               76-330
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               236, 142
               

               Conread position:
               76-357
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               209
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               237, 0
               

               Conread position:
               77-319
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               80-643
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               242, 104
               

               Conread position:
               81-322
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               134, 99
               

               Conread position:
               81-363
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               209
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               236, 65
               

               Conread position:
               83-373
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               30, 26
               

               Conread position:
               86-588
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 47
               

               Conread position:
               87-364
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 191
               

               Conread position:
               90-363
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               212
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               217, 52
               

               Conread position:
               93-272
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               175, 9
               

               Conread position:
               94-366
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 0
               

               Conread position:
               102-361
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               202
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               114, 58
               

               Conread position:
               102-363
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               207
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               84, 74
               

               Conread position:
               102-518
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 150
               

               Conread position:
               102-665
               

               Cow position:
               
               

               Alignm length:
               598
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 499
               

               Conread position:
               111-554
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               294
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               11, 381
               

               Conread position:
               112-349
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 0
               

               Conread position:
               112-665
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 89
               

               Conread position:
               115-357
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 233
               

               Conread position:
               115-665
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 84
               

               Conread position:
               121-276
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               146-361
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               162, 18
               

               Conread position:
               180-665
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 59
               

               Conread position:
               311-665
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 12
               

               Conread position:
               356-664
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 78
               

               Conread position:
               356-665
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 78
               

               Conread position:
               358-660
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 76
               

               Conread position:
               361-535
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               60, 73
               

               Conread position:
               362-650
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 72
               

               Conread position:
               362-651
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 72
               

               Conread position:
               363-551
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               54, 69
               

               Conread position:
               363-626
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               197
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               54, 69
               

               Conread position:
               363-665
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 11
               

               Conread position:
               363-665
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 123
               

               Conread position:
               363-665
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 71
               

               Conread position:
               367-665
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               218
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               65, 53
               

               Conread position:
               383-648
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               397-665
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 9
               

               Conread position:
               431-642
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               446-643
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               152
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.