Cow genome map


           Conread name:
           Ova1-OVRM10078G07
        

               Conread position:
               3-357
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 109
               

               Conread position:
               3-357
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 73
               

               Conread position:
               4-374
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 18
               

               Conread position:
               5-606
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               402
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               9, 56
               

               Conread position:
               6-361
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 70
               

               Conread position:
               7-297
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               7-307
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               7-311
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               216
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               29, 192
               

               Conread position:
               7-350
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 208
               

               Conread position:
               7-665
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               484
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 192
               

               Conread position:
               8-323
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 110
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 83
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 84
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 19
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 151
               

               Conread position:
               8-613
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               8-665
               

               Cow position:
               
               

               Alignm length:
               666
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 263
               

               Conread position:
               8-665
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               494
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 84
               

               Conread position:
               9-255
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               183
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               27, 82
               

               Conread position:
               11-648
               

               Cow position:
               
               

               Alignm length:
               669
               

               Alignm identity:
               419
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               6, 12
               

               Conread position:
               18-374
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               251
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               10, 68
               

               Conread position:
               32-500
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               276, 337
               

               Conread position:
               46-368
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               166, 43
               

               Conread position:
               46-648
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               262, 187
               

               Conread position:
               48-373
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               30, 42
               

               Conread position:
               51-361
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               256, 18
               

               Conread position:
               52-654
               

               Cow position:
               
               

               Alignm length:
               630
               

               Alignm identity:
               389
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               110, 57
               

               Conread position:
               53-357
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 67
               

               Conread position:
               54-358
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               63, 29
               

               Conread position:
               57-613
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 29
               

               Conread position:
               79-654
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               380
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               34, 25
               

               Conread position:
               81-367
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               211
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               91-361
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               94-665
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 66
               

               Conread position:
               94-665
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 499
               

               Conread position:
               96-665
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 119
               

               Conread position:
               98-664
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 160
               

               Conread position:
               100-374
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               13, 9
               

               Conread position:
               102-665
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 332
               

               Conread position:
               103-665
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 32
               

               Conread position:
               112-320
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               161
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               199, 0
               

               Conread position:
               112-361
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               196, 43
               

               Conread position:
               113-361
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 127
               

               Conread position:
               115-239
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               115-361
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 22
               

               Conread position:
               123-648
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 96
               

               Conread position:
               142-648
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               328
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               11, 21
               

               Conread position:
               202-357
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               214-409
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               217-654
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               279
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               166, 92
               

               Conread position:
               234-409
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               289-665
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 157
               

               Conread position:
               355-530
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               5, 78
               

               Conread position:
               356-665
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 78
               

               Conread position:
               362-648
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 72
               

               Conread position:
               362-648
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 45
               

               Conread position:
               362-665
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 71
               

               Conread position:
               362-665
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 73
               

               Conread position:
               362-665
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 72
               

               Conread position:
               362-665
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 72
               

               Conread position:
               362-665
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 70
               

               Conread position:
               362-665
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 72
               

               Conread position:
               362-665
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               219
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               59, 72
               

               Conread position:
               363-529
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               54, 69
               

               Conread position:
               363-648
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 71
               

               Conread position:
               363-665
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 71
               

               Conread position:
               363-665
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 18
               

               Conread position:
               363-665
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               234
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               58, 71
               

               Conread position:
               379-665
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 275
               

               Conread position:
               382-665
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 21
               

               Conread position:
               420-648
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               55, 148
               

               Conread position:
               502-648
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               92, 0
               
Show alignments to all cow chromosomes.