Cow genome map
Conread name: | Ova1-OVRM10078G07 |
Conread position: | 3-357 |
Cow position: | chr20:10103007-10102656 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 109 |
Conread position: | 3-357 |
Cow position: | chr20:15064295-15064662 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 73 |
Conread position: | 4-374 |
Cow position: | chr20:21393109-21393479 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 18 |
Conread position: | 5-606 |
Cow position: | chr20:2791812-2791180 (view UCSC Genome Browser custom track) |
Alignm length: | 639 |
Alignm identity: | 402 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 9, 56 |
Conread position: | 6-361 |
Cow position: | chr20:11276735-11276399 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 70 |
Conread position: | 7-297 |
Cow position: | chr20:29947722-29948014 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 7-307 |
Cow position: | chr20:31123943-31124244 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 203 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 7-311 |
Cow position: | chr20:822295-822593 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 216 |
Alignm E-value: | 8.99634e-43 |
Alignm gaps (pig, cow): | 29, 192 |
Conread position: | 7-350 |
Cow position: | chr20:23798420-23798768 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 208 |
Conread position: | 7-665 |
Cow position: | chr20:19437502-19438177 (view UCSC Genome Browser custom track) |
Alignm length: | 689 |
Alignm identity: | 484 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 192 |
Conread position: | 8-323 |
Cow position: | chr20:8004974-8004659 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 110 |
Conread position: | 8-357 |
Cow position: | chr20:5534486-5534832 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 83 |
Conread position: | 8-357 |
Cow position: | chr20:13762448-13762795 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 84 |
Conread position: | 8-357 |
Cow position: | chr20:21913877-21914219 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 19 |
Conread position: | 8-357 |
Cow position: | chr20:23470122-23469766 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 8-357 |
Cow position: | chr20:27868736-27869090 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 151 |
Conread position: | 8-613 |
Cow position: | chr20:30683877-30684516 (view UCSC Genome Browser custom track) |
Alignm length: | 640 |
Alignm identity: | 441 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 8-665 |
Cow position: | chr20:15291586-15292240 (view UCSC Genome Browser custom track) |
Alignm length: | 666 |
Alignm identity: | 474 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 263 |
Conread position: | 8-665 |
Cow position: | chr20:25851447-25850761 (view UCSC Genome Browser custom track) |
Alignm length: | 695 |
Alignm identity: | 494 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 84 |
Conread position: | 9-255 |
Cow position: | chr20:35118791-35119033 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 183 |
Alignm E-value: | 8.99634e-43 |
Alignm gaps (pig, cow): | 27, 82 |
Conread position: | 11-648 |
Cow position: | chr20:37578996-37579655 (view UCSC Genome Browser custom track) |
Alignm length: | 669 |
Alignm identity: | 419 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 6, 12 |
Conread position: | 18-374 |
Cow position: | chr20:22206083-22206457 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 251 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 10, 68 |
Conread position: | 32-500 |
Cow position: | chr20:7116907-7116434 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 276, 337 |
Conread position: | 46-368 |
Cow position: | chr20:2676698-2677021 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 213 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 166, 43 |
Conread position: | 46-648 |
Cow position: | chr20:20905604-20904995 (view UCSC Genome Browser custom track) |
Alignm length: | 624 |
Alignm identity: | 401 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 262, 187 |
Conread position: | 48-373 |
Cow position: | chr20:29572609-29572279 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 220 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 30, 42 |
Conread position: | 51-361 |
Cow position: | chr20:5483779-5484089 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 256, 18 |
Conread position: | 52-654 |
Cow position: | chr20:31379285-31378663 (view UCSC Genome Browser custom track) |
Alignm length: | 630 |
Alignm identity: | 389 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 110, 57 |
Conread position: | 53-357 |
Cow position: | chr20:12439176-12438868 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 67 |
Conread position: | 54-358 |
Cow position: | chr20:22718092-22717801 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 205 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 63, 29 |
Conread position: | 57-613 |
Cow position: | chr20:18315993-18315414 (view UCSC Genome Browser custom track) |
Alignm length: | 587 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 29 |
Conread position: | 79-654 |
Cow position: | chr20:28475948-28476521 (view UCSC Genome Browser custom track) |
Alignm length: | 597 |
Alignm identity: | 380 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 34, 25 |
Conread position: | 81-367 |
Cow position: | chr20:3252527-3252230 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 211 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 149, 0 |
Conread position: | 91-361 |
Cow position: | chr20:4800021-4799754 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 94-665 |
Cow position: | chr20:10846450-10845892 (view UCSC Genome Browser custom track) |
Alignm length: | 584 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 210, 66 |
Conread position: | 94-665 |
Cow position: | chr20:28160406-28161000 (view UCSC Genome Browser custom track) |
Alignm length: | 604 |
Alignm identity: | 415 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 219, 499 |
Conread position: | 96-665 |
Cow position: | chr20:15098241-15097647 (view UCSC Genome Browser custom track) |
Alignm length: | 602 |
Alignm identity: | 429 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 119 |
Conread position: | 98-664 |
Cow position: | chr20:5561086-5560486 (view UCSC Genome Browser custom track) |
Alignm length: | 608 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 160 |
Conread position: | 100-374 |
Cow position: | chr20:24516502-24516776 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 185 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 13, 9 |
Conread position: | 102-665 |
Cow position: | chr20:24614183-24614765 (view UCSC Genome Browser custom track) |
Alignm length: | 587 |
Alignm identity: | 429 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 210, 332 |
Conread position: | 103-665 |
Cow position: | chr20:8313796-8313210 (view UCSC Genome Browser custom track) |
Alignm length: | 595 |
Alignm identity: | 422 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 32 |
Conread position: | 112-320 |
Cow position: | chr20:28565957-28565750 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 161 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 199, 0 |
Conread position: | 112-361 |
Cow position: | chr20:28593394-28593645 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 185 |
Alignm E-value: | 7e-30 |
Alignm gaps (pig, cow): | 196, 43 |
Conread position: | 113-361 |
Cow position: | chr20:3270367-3270608 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 208, 127 |
Conread position: | 115-239 |
Cow position: | chr20:19005980-19005859 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 99 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 115-361 |
Cow position: | chr20:3032584-3032826 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 22 |
Conread position: | 123-648 |
Cow position: | chr20:9954301-9953770 (view UCSC Genome Browser custom track) |
Alignm length: | 554 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 96 |
Conread position: | 142-648 |
Cow position: | chr20:13435232-13434735 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 328 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 11, 21 |
Conread position: | 202-357 |
Cow position: | chr20:35119058-35119218 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 122 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 110, 0 |
Conread position: | 214-409 |
Cow position: | chr20:19192383-19192182 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 145 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 90, 0 |
Conread position: | 217-654 |
Cow position: | chr20:13782470-13782916 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 279 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 166, 92 |
Conread position: | 234-409 |
Cow position: | chr20:11679345-11679164 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 129 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 289-665 |
Cow position: | chr20:29948338-29948729 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 157 |
Conread position: | 355-530 |
Cow position: | chr20:10102633-10102461 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 130 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 5, 78 |
Conread position: | 356-665 |
Cow position: | chr20:25961021-25961333 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 78 |
Conread position: | 362-648 |
Cow position: | chr20:23469735-23469450 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 72 |
Conread position: | 362-648 |
Cow position: | chr20:23798806-23799102 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 45 |
Conread position: | 362-665 |
Cow position: | chr20:5534863-5535167 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 71 |
Conread position: | 362-665 |
Cow position: | chr20:8004301-8003996 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 73 |
Conread position: | 362-665 |
Cow position: | chr20:12438837-12438531 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 72 |
Conread position: | 362-665 |
Cow position: | chr20:13762826-13763134 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 72 |
Conread position: | 362-665 |
Cow position: | chr20:21914250-21914558 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 70 |
Conread position: | 362-665 |
Cow position: | chr20:27869121-27869427 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 72 |
Conread position: | 362-665 |
Cow position: | chr20:35119497-35119800 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 219 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 59, 72 |
Conread position: | 363-529 |
Cow position: | chr20:4799726-4799554 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 126 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 54, 69 |
Conread position: | 363-648 |
Cow position: | chr20:28565671-28565380 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 71 |
Conread position: | 363-665 |
Cow position: | chr20:822692-822997 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 71 |
Conread position: | 363-665 |
Cow position: | chr20:5484117-5484419 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 18 |
Conread position: | 363-665 |
Cow position: | chr20:15947468-15947150 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 234 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 58, 71 |
Conread position: | 379-665 |
Cow position: | chr20:7116528-7116239 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 275 |
Conread position: | 382-665 |
Cow position: | chr20:3033006-3033291 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 21 |
Conread position: | 420-648 |
Cow position: | chr20:28463462-28463690 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 156 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 55, 148 |
Conread position: | 502-648 |
Cow position: | chr20:35104562-35104414 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 113 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 92, 0 |
Show alignments to all cow chromosomes.