Cow genome map


           Conread name:
           Ova1-OVRM10078G07
        

               Conread position:
               1-357
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               256
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               3-240
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               33, 13
               

               Conread position:
               3-665
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               482
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 68
               

               Conread position:
               4-357
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               252
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               32, 72
               

               Conread position:
               5-368
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               57, 16
               

               Conread position:
               7-232
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               29, 196
               

               Conread position:
               7-244
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               7-350
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               242
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               29, 61
               

               Conread position:
               7-361
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 140
               

               Conread position:
               7-361
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               243
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               31, 140
               

               Conread position:
               7-361
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               247
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               29, 108
               

               Conread position:
               7-366
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 40
               

               Conread position:
               7-381
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               7-409
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               312, 22
               

               Conread position:
               7-409
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 219
               

               Conread position:
               7-409
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               7-409
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 213
               

               Conread position:
               7-665
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 159
               

               Conread position:
               7-665
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 444
               

               Conread position:
               7-665
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 245
               

               Conread position:
               7-665
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 194
               

               Conread position:
               7-665
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               466
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 281
               

               Conread position:
               8-349
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 45
               

               Conread position:
               8-350
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 155
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 83
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 19
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               8-648
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               479
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 208
               

               Conread position:
               8-665
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 82
               

               Conread position:
               10-409
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               13-665
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 240
               

               Conread position:
               14-266
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               14-648
               

               Cow position:
               
               

               Alignm length:
               658
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 71
               

               Conread position:
               15-357
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               15-665
               

               Cow position:
               
               

               Alignm length:
               667
               

               Alignm identity:
               472
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 104
               

               Conread position:
               32-615
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 114
               

               Conread position:
               36-369
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               223
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               272, 40
               

               Conread position:
               37-665
               

               Cow position:
               
               

               Alignm length:
               634
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 292
               

               Conread position:
               39-362
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               5, 73
               

               Conread position:
               42-367
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 50
               

               Conread position:
               46-236
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               9, 39
               

               Conread position:
               46-366
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 113
               

               Conread position:
               49-361
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               222
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               13, 183
               

               Conread position:
               51-362
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               9, 116
               

               Conread position:
               64-350
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               249, 53
               

               Conread position:
               81-357
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               203
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               157, 65
               

               Conread position:
               81-361
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 154
               

               Conread position:
               81-361
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               84-570
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 132
               

               Conread position:
               91-496
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 11
               

               Conread position:
               94-361
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               215, 140
               

               Conread position:
               94-664
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 41
               

               Conread position:
               100-358
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               138, 100
               

               Conread position:
               102-361
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 56
               

               Conread position:
               102-392
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 74
               

               Conread position:
               112-321
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               164
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               112-361
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               112-366
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 0
               

               Conread position:
               112-367
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               195, 174
               

               Conread position:
               112-589
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               262, 194
               

               Conread position:
               114-650
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 254
               

               Conread position:
               123-366
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               184, 111
               

               Conread position:
               138-374
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               170, 46
               

               Conread position:
               214-357
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               218-361
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               311-643
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               233
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               110, 12
               

               Conread position:
               311-665
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 12
               

               Conread position:
               356-661
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 78
               

               Conread position:
               356-665
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 78
               

               Conread position:
               356-665
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 295
               

               Conread position:
               356-665
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 294
               

               Conread position:
               358-665
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 35
               

               Conread position:
               361-608
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 72
               

               Conread position:
               362-643
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 70
               

               Conread position:
               362-648
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               212
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               59, 72
               

               Conread position:
               363-664
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 71
               

               Conread position:
               363-665
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 71
               

               Conread position:
               363-665
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               222
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               97, 38
               

               Conread position:
               367-665
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 71
               

               Conread position:
               368-643
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 64
               

               Conread position:
               368-665
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 67
               

               Conread position:
               382-665
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 52
               

               Conread position:
               421-663
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               435-654
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               74, 30
               

               Conread position:
               490-665
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               527-665
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               551-665
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               87, 0
               
Show alignments to all cow chromosomes.