Cow genome map
Conread name: | Ova1-OVRM10078G07 |
Conread position: | 1-357 |
Cow position: | chr21:358684-359029 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 256 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 20, 27 |
Conread position: | 3-240 |
Cow position: | chr21:41952843-41953073 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 178 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 33, 13 |
Conread position: | 3-665 |
Cow position: | chr21:4183200-4183867 (view UCSC Genome Browser custom track) |
Alignm length: | 689 |
Alignm identity: | 482 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 68 |
Conread position: | 4-357 |
Cow position: | chr21:2769794-2769449 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 252 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 32, 72 |
Conread position: | 5-368 |
Cow position: | chr21:23704698-23705054 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 232 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 57, 16 |
Conread position: | 7-232 |
Cow position: | chr21:2454375-2454600 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 152 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 29, 196 |
Conread position: | 7-244 |
Cow position: | chr21:19609772-19610010 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 170 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 7-350 |
Cow position: | chr21:5016370-5016023 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 242 |
Alignm E-value: | 8.00001e-41 |
Alignm gaps (pig, cow): | 29, 61 |
Conread position: | 7-361 |
Cow position: | chr21:2510313-2510668 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 140 |
Conread position: | 7-361 |
Cow position: | chr21:17572586-17572937 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 243 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 31, 140 |
Conread position: | 7-361 |
Cow position: | chr21:47947770-47948125 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 247 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 29, 108 |
Conread position: | 7-366 |
Cow position: | chr21:11505244-11505608 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 40 |
Conread position: | 7-381 |
Cow position: | chr21:4090305-4090687 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 7-409 |
Cow position: | chr21:12056334-12055935 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 312, 22 |
Conread position: | 7-409 |
Cow position: | chr21:26819357-26818956 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 219 |
Conread position: | 7-409 |
Cow position: | chr21:27708418-27708827 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 7-409 |
Cow position: | chr21:28529886-28529479 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 213 |
Conread position: | 7-665 |
Cow position: | chr21:2415901-2416574 (view UCSC Genome Browser custom track) |
Alignm length: | 690 |
Alignm identity: | 475 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 159 |
Conread position: | 7-665 |
Cow position: | chr21:2884079-2883399 (view UCSC Genome Browser custom track) |
Alignm length: | 685 |
Alignm identity: | 496 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 444 |
Conread position: | 7-665 |
Cow position: | chr21:26638800-26638116 (view UCSC Genome Browser custom track) |
Alignm length: | 693 |
Alignm identity: | 471 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 245 |
Conread position: | 7-665 |
Cow position: | chr21:37044578-37045259 (view UCSC Genome Browser custom track) |
Alignm length: | 691 |
Alignm identity: | 446 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 194 |
Conread position: | 7-665 |
Cow position: | chr21:46915248-46915937 (view UCSC Genome Browser custom track) |
Alignm length: | 697 |
Alignm identity: | 466 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 281 |
Conread position: | 8-349 |
Cow position: | chr21:33251052-33251396 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 45 |
Conread position: | 8-350 |
Cow position: | chr21:40272154-40271815 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 155 |
Conread position: | 8-357 |
Cow position: | chr21:1190699-1191054 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 8-357 |
Cow position: | chr21:3778431-3778778 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 83 |
Conread position: | 8-357 |
Cow position: | chr21:10566336-10566686 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 19 |
Conread position: | 8-357 |
Cow position: | chr21:10849737-10850092 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 8-648 |
Cow position: | chr21:31559990-31559321 (view UCSC Genome Browser custom track) |
Alignm length: | 679 |
Alignm identity: | 479 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 208 |
Conread position: | 8-665 |
Cow position: | chr21:48115764-48116450 (view UCSC Genome Browser custom track) |
Alignm length: | 693 |
Alignm identity: | 475 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 82 |
Conread position: | 10-409 |
Cow position: | chr21:11453994-11453591 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 13-665 |
Cow position: | chr21:39424731-39425412 (view UCSC Genome Browser custom track) |
Alignm length: | 689 |
Alignm identity: | 451 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 240 |
Conread position: | 14-266 |
Cow position: | chr21:39580385-39580638 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 165 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 14-648 |
Cow position: | chr21:2476844-2476192 (view UCSC Genome Browser custom track) |
Alignm length: | 658 |
Alignm identity: | 468 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 71 |
Conread position: | 15-357 |
Cow position: | chr21:145585-145931 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 11 |
Conread position: | 15-665 |
Cow position: | chr21:4590293-4589642 (view UCSC Genome Browser custom track) |
Alignm length: | 667 |
Alignm identity: | 472 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 104 |
Conread position: | 32-615 |
Cow position: | chr21:7267850-7267242 (view UCSC Genome Browser custom track) |
Alignm length: | 616 |
Alignm identity: | 431 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 177, 114 |
Conread position: | 36-369 |
Cow position: | chr21:21516898-21517226 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 223 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 272, 40 |
Conread position: | 37-665 |
Cow position: | chr21:2501624-2502235 (view UCSC Genome Browser custom track) |
Alignm length: | 634 |
Alignm identity: | 439 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 292 |
Conread position: | 39-362 |
Cow position: | chr21:21948110-21947784 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 221 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 5, 73 |
Conread position: | 42-367 |
Cow position: | chr21:47939170-47939503 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 50 |
Conread position: | 46-236 |
Cow position: | chr21:35089399-35089588 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 137 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 9, 39 |
Conread position: | 46-366 |
Cow position: | chr21:1292478-1292156 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 113 |
Conread position: | 49-361 |
Cow position: | chr21:23860481-23860799 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 222 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 13, 183 |
Conread position: | 51-362 |
Cow position: | chr21:34055213-34054898 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 216 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 9, 116 |
Conread position: | 64-350 |
Cow position: | chr21:30600199-30599915 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 249, 53 |
Conread position: | 81-357 |
Cow position: | chr21:3426217-3426496 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 203 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 157, 65 |
Conread position: | 81-361 |
Cow position: | chr21:2530395-2530110 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 144, 154 |
Conread position: | 81-361 |
Cow position: | chr21:4076578-4076861 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 0 |
Conread position: | 84-570 |
Cow position: | chr21:2716935-2716425 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 224, 132 |
Conread position: | 91-496 |
Cow position: | chr21:3615037-3615440 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 11 |
Conread position: | 94-361 |
Cow position: | chr21:35596125-35596384 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 198 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 215, 140 |
Conread position: | 94-664 |
Cow position: | chr21:23811657-23812223 (view UCSC Genome Browser custom track) |
Alignm length: | 580 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 220, 41 |
Conread position: | 100-358 |
Cow position: | chr21:25992868-25992614 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 174 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 138, 100 |
Conread position: | 102-361 |
Cow position: | chr21:13124244-13123983 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 128, 56 |
Conread position: | 102-392 |
Cow position: | chr21:4222943-4222639 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 120, 74 |
Conread position: | 112-321 |
Cow position: | chr21:2674875-2674666 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 164 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 112-361 |
Cow position: | chr21:9891375-9891619 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 0 |
Conread position: | 112-366 |
Cow position: | chr21:34292781-34293039 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 192 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 195, 0 |
Conread position: | 112-367 |
Cow position: | chr21:21031502-21031758 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 171 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 195, 174 |
Conread position: | 112-589 |
Cow position: | chr21:34259450-34258954 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 262, 194 |
Conread position: | 114-650 |
Cow position: | chr21:30561566-30562139 (view UCSC Genome Browser custom track) |
Alignm length: | 575 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 198, 254 |
Conread position: | 123-366 |
Cow position: | chr21:2789208-2788970 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 183 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 184, 111 |
Conread position: | 138-374 |
Cow position: | chr21:36714428-36714661 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 164 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 170, 46 |
Conread position: | 214-357 |
Cow position: | chr21:2541552-2541403 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 115 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 218-361 |
Cow position: | chr21:27625-27765 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 109 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 311-643 |
Cow position: | chr21:2541420-2541082 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 233 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 110, 12 |
Conread position: | 311-665 |
Cow position: | chr21:4222692-4222344 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 12 |
Conread position: | 356-661 |
Cow position: | chr21:8678323-8678015 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 78 |
Conread position: | 356-665 |
Cow position: | chr21:6339603-6339915 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 78 |
Conread position: | 356-665 |
Cow position: | chr21:11453619-11453307 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 295 |
Conread position: | 356-665 |
Cow position: | chr21:12055963-12055652 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 294 |
Conread position: | 358-665 |
Cow position: | chr21:2510691-2511000 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 35 |
Conread position: | 361-608 |
Cow position: | chr21:2769419-2769166 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 72 |
Conread position: | 362-643 |
Cow position: | chr21:10850123-10850410 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 70 |
Conread position: | 362-648 |
Cow position: | chr21:30599877-30599591 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 212 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 59, 72 |
Conread position: | 363-664 |
Cow position: | chr21:3426529-3426834 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 71 |
Conread position: | 363-665 |
Cow position: | chr21:2788947-2788644 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 71 |
Conread position: | 363-665 |
Cow position: | chr21:4076889-4077186 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 222 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 97, 38 |
Conread position: | 367-665 |
Cow position: | chr21:145967-146271 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 71 |
Conread position: | 368-643 |
Cow position: | chr21:35596417-35596698 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 64 |
Conread position: | 368-665 |
Cow position: | chr21:40271628-40271328 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 67 |
Conread position: | 382-665 |
Cow position: | chr21:4090712-4090998 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 52 |
Conread position: | 421-663 |
Cow position: | chr21:18820313-18820081 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 175 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 435-654 |
Cow position: | chr21:4086924-4087144 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 156 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 74, 30 |
Conread position: | 490-665 |
Cow position: | chr21:26650218-26650390 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 136 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 155, 0 |
Conread position: | 527-665 |
Cow position: | chr21:3615536-3615660 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 111 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 551-665 |
Cow position: | chr21:30226257-30226368 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 94 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 87, 0 |
Show alignments to all cow chromosomes.