Cow genome map

Conread name: Ova1-OVRM10078G07

Conread position: 1-374
Cow position:
Alignm length: 378
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 14

Conread position: 2-361
Cow position:
Alignm length: 367
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 74

Conread position: 3-349
Cow position:
Alignm length: 353
Alignm identity: 254
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 33, 73

Conread position: 3-357
Cow position:
Alignm length: 363
Alignm identity: 252
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 11, 33

Conread position: 4-361
Cow position:
Alignm length: 364
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 19

Conread position: 6-358
Cow position:
Alignm length: 355
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 165

Conread position: 6-361
Cow position:
Alignm length: 358
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 183

Conread position: 6-372
Cow position:
Alignm length: 375
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 78

Conread position: 6-646
Cow position:
Alignm length: 670
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 57

Conread position: 6-665
Cow position:
Alignm length: 681
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 256

Conread position: 7-202
Cow position:
Alignm length: 197
Alignm identity: 144
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 15, 0

Conread position: 7-286
Cow position:
Alignm length: 282
Alignm identity: 209
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 29, 40

Conread position: 7-347
Cow position:
Alignm length: 343
Alignm identity: 240
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 29, 78

Conread position: 7-357
Cow position:
Alignm length: 354
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 43

Conread position: 7-357
Cow position:
Alignm length: 357
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 274

Conread position: 7-357
Cow position:
Alignm length: 357
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 7-358
Cow position:
Alignm length: 358
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 7-361
Cow position:
Alignm length: 358
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 203

Conread position: 7-361
Cow position:
Alignm length: 364
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 7-361
Cow position:
Alignm length: 363
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 72

Conread position: 7-363
Cow position:
Alignm length: 363
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 7-409
Cow position:
Alignm length: 410
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 7-409
Cow position:
Alignm length: 405
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 303

Conread position: 7-450
Cow position:
Alignm length: 452
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 69

Conread position: 7-610
Cow position:
Alignm length: 627
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 98

Conread position: 7-648
Cow position:
Alignm length: 674
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 199

Conread position: 8-178
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 8-357
Cow position:
Alignm length: 356
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 261

Conread position: 8-357
Cow position:
Alignm length: 352
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 8-357
Cow position:
Alignm length: 354
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 111

Conread position: 8-664
Cow position:
Alignm length: 695
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 30

Conread position: 8-665
Cow position:
Alignm length: 708
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 19

Conread position: 8-665
Cow position:
Alignm length: 687
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 75

Conread position: 9-437
Cow position:
Alignm length: 436
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 18

Conread position: 14-665
Cow position:
Alignm length: 689
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 275

Conread position: 14-665
Cow position:
Alignm length: 686
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 274

Conread position: 15-380
Cow position:
Alignm length: 369
Alignm identity: 255
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 21, 43

Conread position: 15-665
Cow position:
Alignm length: 677
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 435

Conread position: 15-665
Cow position:
Alignm length: 655
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 68

Conread position: 17-361
Cow position:
Alignm length: 352
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 265

Conread position: 26-388
Cow position:
Alignm length: 370
Alignm identity: 239
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 185, 14

Conread position: 32-311
Cow position:
Alignm length: 281
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 203

Conread position: 32-357
Cow position:
Alignm length: 330
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 51

Conread position: 32-357
Cow position:
Alignm length: 331
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 0

Conread position: 32-648
Cow position:
Alignm length: 648
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 97

Conread position: 37-357
Cow position:
Alignm length: 326
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 98

Conread position: 38-320
Cow position:
Alignm length: 285
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 277

Conread position: 41-371
Cow position:
Alignm length: 333
Alignm identity: 213
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 244, 42

Conread position: 47-640
Cow position:
Alignm length: 629
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 62

Conread position: 48-366
Cow position:
Alignm length: 322
Alignm identity: 203
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 51, 40

Conread position: 48-379
Cow position:
Alignm length: 336
Alignm identity: 208
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 258, 110

Conread position: 49-257
Cow position:
Alignm length: 209
Alignm identity: 157
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 147, 0

Conread position: 49-665
Cow position:
Alignm length: 630
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 54

Conread position: 51-572
Cow position:
Alignm length: 532
Alignm identity: 346
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 165, 18

Conread position: 54-372
Cow position:
Alignm length: 324
Alignm identity: 219
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 193, 121

Conread position: 62-363
Cow position:
Alignm length: 307
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 111

Conread position: 70-661
Cow position:
Alignm length: 620
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 298

Conread position: 77-665
Cow position:
Alignm length: 617
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 460

Conread position: 81-361
Cow position:
Alignm length: 284
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 15

Conread position: 81-361
Cow position:
Alignm length: 289
Alignm identity: 199
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 159, 218

Conread position: 81-665
Cow position:
Alignm length: 619
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 98

Conread position: 85-367
Cow position:
Alignm length: 286
Alignm identity: 189
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 46, 17

Conread position: 88-265
Cow position:
Alignm length: 178
Alignm identity: 125
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 91-344
Cow position:
Alignm length: 255
Alignm identity: 185
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 5, 28

Conread position: 91-640
Cow position:
Alignm length: 585
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 197

Conread position: 93-236
Cow position:
Alignm length: 144
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 94-349
Cow position:
Alignm length: 262
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 0

Conread position: 94-357
Cow position:
Alignm length: 266
Alignm identity: 192
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 130, 66

Conread position: 94-374
Cow position:
Alignm length: 288
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 265

Conread position: 94-385
Cow position:
Alignm length: 297
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 188

Conread position: 112-357
Cow position:
Alignm length: 252
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 149

Conread position: 112-357
Cow position:
Alignm length: 251
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 0

Conread position: 125-366
Cow position:
Alignm length: 259
Alignm identity: 195
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 104, 0

Conread position: 131-648
Cow position:
Alignm length: 537
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 68

Conread position: 151-499
Cow position:
Alignm length: 355
Alignm identity: 208
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 161, 280

Conread position: 154-361
Cow position:
Alignm length: 213
Alignm identity: 156
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 158, 71

Conread position: 178-356
Cow position:
Alignm length: 180
Alignm identity: 124
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 100, 133

Conread position: 218-665
Cow position:
Alignm length: 481
Alignm identity: 331
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 77, 49

Conread position: 235-648
Cow position:
Alignm length: 426
Alignm identity: 286
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 78, 97

Conread position: 310-665
Cow position:
Alignm length: 363
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 13

Conread position: 313-665
Cow position:
Alignm length: 365
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 126

Conread position: 314-665
Cow position:
Alignm length: 359
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 35

Conread position: 339-665
Cow position:
Alignm length: 334
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 93

Conread position: 358-664
Cow position:
Alignm length: 309
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 75

Conread position: 358-665
Cow position:
Alignm length: 315
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 76

Conread position: 358-665
Cow position:
Alignm length: 315
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 76

Conread position: 358-665
Cow position:
Alignm length: 315
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 76

Conread position: 361-648
Cow position:
Alignm length: 295
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 73

Conread position: 361-665
Cow position:
Alignm length: 312
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 73

Conread position: 362-625
Cow position:
Alignm length: 271
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 72

Conread position: 362-648
Cow position:
Alignm length: 294
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 72

Conread position: 362-664
Cow position:
Alignm length: 308
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 23

Conread position: 362-665
Cow position:
Alignm length: 312
Alignm identity: 225
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 59, 19

Conread position: 362-665
Cow position:
Alignm length: 311
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 72

Conread position: 362-665
Cow position:
Alignm length: 307
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 70

Conread position: 362-665
Cow position:
Alignm length: 311
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 72

Conread position: 362-665
Cow position:
Alignm length: 311
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 72

Conread position: 363-562
Cow position:
Alignm length: 206
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 115

Conread position: 363-660
Cow position:
Alignm length: 306
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 69

Conread position: 363-664
Cow position:
Alignm length: 302
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 363-665
Cow position:
Alignm length: 310
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 57

Conread position: 363-665
Cow position:
Alignm length: 305
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 69

Conread position: 363-665
Cow position:
Alignm length: 311
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 71

Conread position: 363-665
Cow position:
Alignm length: 311
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 71

Conread position: 363-665
Cow position:
Alignm length: 310
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 71

Conread position: 363-665
Cow position:
Alignm length: 307
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 18

Conread position: 363-665
Cow position:
Alignm length: 310
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 69

Conread position: 367-587
Cow position:
Alignm length: 228
Alignm identity: 170
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 54, 67

Conread position: 367-665
Cow position:
Alignm length: 306
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 285

Conread position: 367-665
Cow position:
Alignm length: 306
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 67

Conread position: 369-665
Cow position:
Alignm length: 303
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 65

Conread position: 370-665
Cow position:
Alignm length: 303
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 64

Conread position: 396-664
Cow position:
Alignm length: 282
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 38

Conread position: 440-665
Cow position:
Alignm length: 226
Alignm identity: 172
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 157, 0

Conread position: 450-665
Cow position:
Alignm length: 216
Alignm identity: 162
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 199, 0

Conread position: 517-665
Cow position:
Alignm length: 149
Alignm identity: 121
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 62, 0

Conread position: 526-665
Cow position:
Alignm length: 140
Alignm identity: 112
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 119, 0

Conread position: 543-648
Cow position:
Alignm length: 106
Alignm identity: 91
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.