Cow genome map
| Conread name: | Ova1-OVRM10078G07 |
| Conread position: | 1-648 |
| Cow position: | chr23:4509586-4510234 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 39 |
| Conread position: | 4-260 |
| Cow position: | chr23:2756979-2757239 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 4-645 |
| Cow position: | chr23:1025562-1024901 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 11 |
| Conread position: | 7-310 |
| Cow position: | chr23:14975278-14974981 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 193 |
| Conread position: | 7-347 |
| Cow position: | chr23:20301695-20302041 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 84 |
| Conread position: | 7-357 |
| Cow position: | chr23:2715834-2716191 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 7-357 |
| Cow position: | chr23:4815563-4815912 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 19 |
| Conread position: | 7-357 |
| Cow position: | chr23:19489025-19489377 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 19 |
| Conread position: | 7-357 |
| Cow position: | chr23:19951101-19950744 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 7-409 |
| Cow position: | chr23:4359321-4359722 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 105 |
| Conread position: | 8-350 |
| Cow position: | chr23:15220408-15220065 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 208 |
| Conread position: | 8-357 |
| Cow position: | chr23:2027640-2027279 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 86 |
| Conread position: | 8-357 |
| Cow position: | chr23:3882209-3881859 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 304, 0 |
| Conread position: | 8-357 |
| Cow position: | chr23:4641135-4640785 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 69 |
| Conread position: | 8-357 |
| Cow position: | chr23:27398991-27399343 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 84 |
| Conread position: | 8-357 |
| Cow position: | chr23:36031885-36031532 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 8-361 |
| Cow position: | chr23:28216776-28217134 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 197 |
| Conread position: | 8-625 |
| Cow position: | chr23:11777971-11778608 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 217 |
| Conread position: | 8-647 |
| Cow position: | chr23:28912898-28913557 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 83 |
| Conread position: | 8-665 |
| Cow position: | chr23:15176542-15177250 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 83 |
| Conread position: | 8-665 |
| Cow position: | chr23:15525108-15525786 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 310, 23 |
| Conread position: | 10-357 |
| Cow position: | chr23:1141054-1141396 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 189 |
| Conread position: | 11-320 |
| Cow position: | chr23:34174676-34174982 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 39, 55 |
| Conread position: | 20-311 |
| Cow position: | chr23:14966477-14966184 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 54 |
| Conread position: | 32-661 |
| Cow position: | chr23:2796049-2795393 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 20 |
| Conread position: | 37-349 |
| Cow position: | chr23:4433991-4434296 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 228 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 275, 22 |
| Conread position: | 37-361 |
| Cow position: | chr23:19332881-19332555 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 194, 29 |
| Conread position: | 38-478 |
| Cow position: | chr23:31652320-31651887 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 289 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 230, 14 |
| Conread position: | 40-400 |
| Cow position: | chr23:19449540-19449905 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 30, 49 |
| Conread position: | 41-357 |
| Cow position: | chr23:989117-988801 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 266, 38 |
| Conread position: | 41-361 |
| Cow position: | chr23:4276478-4276798 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 35 |
| Conread position: | 44-361 |
| Cow position: | chr23:22147737-22147414 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 268, 0 |
| Conread position: | 46-643 |
| Cow position: | chr23:2339930-2340553 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 151 |
| Conread position: | 46-648 |
| Cow position: | chr23:22876104-22875513 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 95 |
| Conread position: | 49-361 |
| Cow position: | chr23:16617307-16617005 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 221 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 13, 27 |
| Conread position: | 80-363 |
| Cow position: | chr23:967790-967502 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 278 |
| Conread position: | 81-361 |
| Cow position: | chr23:5779527-5779241 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 81-361 |
| Cow position: | chr23:5875213-5874931 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 0 |
| Conread position: | 83-361 |
| Cow position: | chr23:19017270-19017544 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 115, 122 |
| Conread position: | 85-647 |
| Cow position: | chr23:3380682-3380117 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 167 |
| Conread position: | 86-374 |
| Cow position: | chr23:31595620-31595322 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 155 |
| Conread position: | 94-330 |
| Cow position: | chr23:3013203-3013436 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 124, 139 |
| Conread position: | 96-357 |
| Cow position: | chr23:1330712-1330450 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 110 |
| Conread position: | 102-363 |
| Cow position: | chr23:2765788-2765533 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 133 |
| Conread position: | 103-240 |
| Cow position: | chr23:2045609-2045748 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 111-591 |
| Cow position: | chr23:16481762-16481268 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 131 |
| Conread position: | 112-664 |
| Cow position: | chr23:2574155-2574711 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 118 |
| Conread position: | 114-665 |
| Cow position: | chr23:7273253-7273807 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 81 |
| Conread position: | 118-357 |
| Cow position: | chr23:30636706-30636462 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 0 |
| Conread position: | 129-402 |
| Cow position: | chr23:31446421-31446700 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 183, 0 |
| Conread position: | 145-302 |
| Cow position: | chr23:6469652-6469495 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 155-361 |
| Cow position: | chr23:8980856-8980649 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 162 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 165-368 |
| Cow position: | chr23:2725505-2725707 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 134, 53 |
| Conread position: | 190-361 |
| Cow position: | chr23:2313570-2313394 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 214-374 |
| Cow position: | chr23:16616173-16616013 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 94, 138 |
| Conread position: | 325-665 |
| Cow position: | chr23:2027286-2026943 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 110 |
| Conread position: | 358-661 |
| Cow position: | chr23:16616982-16616674 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 35 |
| Conread position: | 358-665 |
| Cow position: | chr23:4434331-4434636 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 23 |
| Conread position: | 362-648 |
| Cow position: | chr23:3881828-3881543 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 67 |
| Conread position: | 362-665 |
| Cow position: | chr23:967475-967174 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 221 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 59, 72 |
| Conread position: | 362-665 |
| Cow position: | chr23:4640754-4640448 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 72 |
| Conread position: | 362-665 |
| Cow position: | chr23:4815943-4816251 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 291 |
| Conread position: | 362-665 |
| Cow position: | chr23:4888551-4888849 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 72 |
| Conread position: | 362-665 |
| Cow position: | chr23:36031501-36031197 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 20 |
| Conread position: | 363-664 |
| Cow position: | chr23:5779213-5778912 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 18 |
| Conread position: | 363-665 |
| Cow position: | chr23:2524324-2524021 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 18 |
| Conread position: | 363-665 |
| Cow position: | chr23:3013517-3013822 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 69 |
| Conread position: | 363-665 |
| Cow position: | chr23:14974690-14974387 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 71 |
| Conread position: | 363-665 |
| Cow position: | chr23:25684188-25683887 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 67 |
| Conread position: | 363-665 |
| Cow position: | chr23:31591937-31591626 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 53 |
| Conread position: | 367-665 |
| Cow position: | chr23:5874899-5874603 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 64 |
| Conread position: | 367-665 |
| Cow position: | chr23:19950708-19950407 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 67 |
| Conread position: | 382-648 |
| Cow position: | chr23:20302105-20302375 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 52 |
| Conread position: | 387-665 |
| Cow position: | chr23:2757489-2757770 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 47 |
| Conread position: | 401-665 |
| Cow position: | chr23:15219979-15219715 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 35 |
| Conread position: | 451-665 |
| Cow position: | chr23:20156252-20156039 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 0 |
| Conread position: | 536-665 |
| Cow position: | chr23:2765403-2765277 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 109, 0 |
Show alignments to all cow chromosomes.