Cow genome map


           Conread name:
           Ova1-OVRM10078G07
        

               Conread position:
               1-577
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               387
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               5, 21
               

               Conread position:
               3-357
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               309, 35
               

               Conread position:
               3-357
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               3-620
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 81
               

               Conread position:
               6-271
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 88
               

               Conread position:
               6-340
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 198
               

               Conread position:
               6-350
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 70
               

               Conread position:
               6-367
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 83
               

               Conread position:
               6-374
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 70
               

               Conread position:
               7-286
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               29, 173
               

               Conread position:
               7-347
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               310, 222
               

               Conread position:
               7-350
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               7-357
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               29, 77
               

               Conread position:
               7-358
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               7-361
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               7-361
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               7-361
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               249
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               29, 103
               

               Conread position:
               7-409
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 211
               

               Conread position:
               7-409
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 84
               

               Conread position:
               7-664
               

               Cow position:
               
               

               Alignm length:
               678
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 19
               

               Conread position:
               8-164
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               29, 84
               

               Conread position:
               8-343
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 331
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 19
               

               Conread position:
               9-647
               

               Cow position:
               
               

               Alignm length:
               674
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 148
               

               Conread position:
               10-651
               

               Cow position:
               
               

               Alignm length:
               675
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 240
               

               Conread position:
               12-655
               

               Cow position:
               
               

               Alignm length:
               664
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 40
               

               Conread position:
               13-361
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               241
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               23, 249
               

               Conread position:
               15-409
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 76
               

               Conread position:
               15-651
               

               Cow position:
               
               

               Alignm length:
               657
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 94
               

               Conread position:
               17-374
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               32-344
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 58
               

               Conread position:
               32-647
               

               Cow position:
               
               

               Alignm length:
               651
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 278
               

               Conread position:
               32-648
               

               Cow position:
               
               

               Alignm length:
               652
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               280, 27
               

               Conread position:
               37-358
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               233
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               38-361
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               274, 0
               

               Conread position:
               39-361
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 43
               

               Conread position:
               40-573
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               267, 20
               

               Conread position:
               44-361
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               262, 285
               

               Conread position:
               46-350
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 22
               

               Conread position:
               46-647
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 0
               

               Conread position:
               47-331
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               67, 171
               

               Conread position:
               48-369
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               150, 59
               

               Conread position:
               48-665
               

               Cow position:
               
               

               Alignm length:
               652
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 108
               

               Conread position:
               52-366
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               8, 37
               

               Conread position:
               53-651
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 113
               

               Conread position:
               56-357
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               253, 35
               

               Conread position:
               75-374
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               218
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               140, 8
               

               Conread position:
               77-351
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               206, 103
               

               Conread position:
               83-357
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               9, 19
               

               Conread position:
               88-409
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 0
               

               Conread position:
               90-647
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 21
               

               Conread position:
               94-227
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               13, 5
               

               Conread position:
               98-361
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               193
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               221, 100
               

               Conread position:
               104-665
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 188
               

               Conread position:
               111-361
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               198, 104
               

               Conread position:
               112-277
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               112-373
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               137, 122
               

               Conread position:
               115-351
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 100
               

               Conread position:
               120-409
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               122-347
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               129-665
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               359
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               171, 26
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 97
               

               Conread position:
               175-409
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               313-665
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 16
               

               Conread position:
               314-665
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 35
               

               Conread position:
               356-664
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 78
               

               Conread position:
               356-665
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 140
               

               Conread position:
               358-612
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               63, 76
               

               Conread position:
               358-665
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 76
               

               Conread position:
               358-665
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 209
               

               Conread position:
               358-665
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               232
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               65, 76
               

               Conread position:
               363-643
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 71
               

               Conread position:
               363-665
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 71
               

               Conread position:
               366-648
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 50
               

               Conread position:
               367-665
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 67
               

               Conread position:
               368-505
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               53, 66
               

               Conread position:
               379-665
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 102
               

               Conread position:
               388-664
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               202
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               28, 41
               

               Conread position:
               430-645
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               162
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               441-648
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               159
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               525-665
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               18, 64
               
Show alignments to all cow chromosomes.