Cow genome map
Conread name: | Ova1-OVRM10078G07 |
Conread position: | 4-660 |
Cow position: | chr25:18276308-18275615 (view UCSC Genome Browser custom track) |
Alignm length: | 700 |
Alignm identity: | 463 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 145 |
Conread position: | 5-366 |
Cow position: | chr25:22147021-22147385 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 21 |
Conread position: | 6-361 |
Cow position: | chr25:17561067-17560726 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 75 |
Conread position: | 7-366 |
Cow position: | chr25:20777372-20777006 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 7-375 |
Cow position: | chr25:32579511-32579867 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 256 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 25, 69 |
Conread position: | 7-409 |
Cow position: | chr25:19916615-19917018 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 272 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 31, 192 |
Conread position: | 7-665 |
Cow position: | chr25:35362893-35362211 (view UCSC Genome Browser custom track) |
Alignm length: | 686 |
Alignm identity: | 466 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 665 |
Conread position: | 8-357 |
Cow position: | chr25:18890486-18890133 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 18 |
Conread position: | 8-358 |
Cow position: | chr25:24171564-24171910 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 238 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 61, 43 |
Conread position: | 8-363 |
Cow position: | chr25:8674457-8674803 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 304, 62 |
Conread position: | 8-363 |
Cow position: | chr25:13780565-13780919 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 76 |
Conread position: | 8-382 |
Cow position: | chr25:34014817-34014444 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 19 |
Conread position: | 8-665 |
Cow position: | chr25:25506177-25506867 (view UCSC Genome Browser custom track) |
Alignm length: | 697 |
Alignm identity: | 500 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 363 |
Conread position: | 8-665 |
Cow position: | chr25:26278804-26279475 (view UCSC Genome Browser custom track) |
Alignm length: | 687 |
Alignm identity: | 473 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 19 |
Conread position: | 9-665 |
Cow position: | chr25:34347462-34346799 (view UCSC Genome Browser custom track) |
Alignm length: | 672 |
Alignm identity: | 468 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 44 |
Conread position: | 13-366 |
Cow position: | chr25:17590011-17589657 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 217 |
Conread position: | 15-361 |
Cow position: | chr25:17563367-17563035 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 66 |
Conread position: | 19-364 |
Cow position: | chr25:20493903-20494243 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 231 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 9, 62 |
Conread position: | 37-317 |
Cow position: | chr25:18302331-18302615 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 193, 148 |
Conread position: | 39-357 |
Cow position: | chr25:18255795-18255481 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 213 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 95, 66 |
Conread position: | 39-380 |
Cow position: | chr25:11933962-11933621 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 240 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 69, 167 |
Conread position: | 40-499 |
Cow position: | chr25:26866783-26867268 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 0 |
Conread position: | 41-648 |
Cow position: | chr25:17469131-17468494 (view UCSC Genome Browser custom track) |
Alignm length: | 642 |
Alignm identity: | 446 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 36 |
Conread position: | 46-357 |
Cow position: | chr25:18092589-18092901 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 261, 106 |
Conread position: | 48-254 |
Cow position: | chr25:32979191-32978984 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 139 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 49-361 |
Cow position: | chr25:19288777-19288465 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 209 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 32, 20 |
Conread position: | 49-665 |
Cow position: | chr25:33243447-33244038 (view UCSC Genome Browser custom track) |
Alignm length: | 628 |
Alignm identity: | 406 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 193, 26 |
Conread position: | 67-361 |
Cow position: | chr25:18411694-18411401 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 240, 158 |
Conread position: | 76-361 |
Cow position: | chr25:21901676-21901957 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 192 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 28, 194 |
Conread position: | 94-358 |
Cow position: | chr25:18060979-18060703 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 206 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 124, 71 |
Conread position: | 98-357 |
Cow position: | chr25:20629195-20629459 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 214, 0 |
Conread position: | 102-349 |
Cow position: | chr25:18028006-18027755 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 188 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 206, 123 |
Conread position: | 102-374 |
Cow position: | chr25:11375724-11375450 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 205, 264 |
Conread position: | 112-648 |
Cow position: | chr25:14015809-14016369 (view UCSC Genome Browser custom track) |
Alignm length: | 566 |
Alignm identity: | 417 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 196, 189 |
Conread position: | 119-380 |
Cow position: | chr25:12759959-12759692 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 176 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 78, 184 |
Conread position: | 121-332 |
Cow position: | chr25:12943796-12943583 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 162 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 198, 0 |
Conread position: | 124-361 |
Cow position: | chr25:34656801-34656559 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 184 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 183, 0 |
Conread position: | 171-409 |
Cow position: | chr25:33991363-33991123 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 170 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 141, 14 |
Conread position: | 217-357 |
Cow position: | chr25:36240283-36240428 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 111 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 358-665 |
Cow position: | chr25:17589640-17589336 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 76 |
Conread position: | 362-648 |
Cow position: | chr25:12759683-12759393 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 204 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 59, 86 |
Conread position: | 362-648 |
Cow position: | chr25:12942788-12942496 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 69 |
Conread position: | 362-648 |
Cow position: | chr25:20629490-20629775 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 72 |
Conread position: | 362-650 |
Cow position: | chr25:18890102-18889810 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 70 |
Conread position: | 363-649 |
Cow position: | chr25:11933612-11933325 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 205 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 58, 154 |
Conread position: | 363-665 |
Cow position: | chr25:11375434-11375130 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 71 |
Conread position: | 363-665 |
Cow position: | chr25:32579879-32580183 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 71 |
Conread position: | 363-665 |
Cow position: | chr25:34656531-34656228 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 24 |
Conread position: | 363-665 |
Cow position: | chr25:36240460-36240774 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 77 |
Conread position: | 367-665 |
Cow position: | chr25:18027708-18027407 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 67 |
Conread position: | 373-665 |
Cow position: | chr25:27022642-27022348 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 9 |
Conread position: | 375-648 |
Cow position: | chr25:8674841-8675120 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 59 |
Conread position: | 382-665 |
Cow position: | chr25:18092951-18093228 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 213 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 39, 53 |
Conread position: | 382-665 |
Cow position: | chr25:26922161-26922435 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 211 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 39, 52 |
Conread position: | 474-664 |
Cow position: | chr25:18303431-18303618 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 149 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 171, 0 |
Show alignments to all cow chromosomes.