Cow genome map

Conread name: Ova1-OVRM10078G07

Conread position: 4-660
Cow position: chr25:18276308-18275615 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 145

Conread position: 5-366
Cow position: chr25:22147021-22147385 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 21

Conread position: 6-361
Cow position: chr25:17561067-17560726 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 75

Conread position: 7-366
Cow position: chr25:20777372-20777006 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 7-375
Cow position: chr25:32579511-32579867 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 256
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 25, 69

Conread position: 7-409
Cow position: chr25:19916615-19917018 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 272
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 31, 192

Conread position: 7-665
Cow position: chr25:35362893-35362211 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 665

Conread position: 8-357
Cow position: chr25:18890486-18890133 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 18

Conread position: 8-358
Cow position: chr25:24171564-24171910 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 238
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 61, 43

Conread position: 8-363
Cow position: chr25:8674457-8674803 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 62

Conread position: 8-363
Cow position: chr25:13780565-13780919 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 76

Conread position: 8-382
Cow position: chr25:34014817-34014444 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 19

Conread position: 8-665
Cow position: chr25:25506177-25506867 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 363

Conread position: 8-665
Cow position: chr25:26278804-26279475 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 19

Conread position: 9-665
Cow position: chr25:34347462-34346799 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 44

Conread position: 13-366
Cow position: chr25:17590011-17589657 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 217

Conread position: 15-361
Cow position: chr25:17563367-17563035 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 66

Conread position: 19-364
Cow position: chr25:20493903-20494243 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 231
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 9, 62

Conread position: 37-317
Cow position: chr25:18302331-18302615 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 148

Conread position: 39-357
Cow position: chr25:18255795-18255481 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 213
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 95, 66

Conread position: 39-380
Cow position: chr25:11933962-11933621 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 240
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 69, 167

Conread position: 40-499
Cow position: chr25:26866783-26867268 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 0

Conread position: 41-648
Cow position: chr25:17469131-17468494 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 36

Conread position: 46-357
Cow position: chr25:18092589-18092901 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 106

Conread position: 48-254
Cow position: chr25:32979191-32978984 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 139
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 49-361
Cow position: chr25:19288777-19288465 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 209
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 32, 20

Conread position: 49-665
Cow position: chr25:33243447-33244038 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 406
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 193, 26

Conread position: 67-361
Cow position: chr25:18411694-18411401 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 158

Conread position: 76-361
Cow position: chr25:21901676-21901957 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 192
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 28, 194

Conread position: 94-358
Cow position: chr25:18060979-18060703 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 206
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 124, 71

Conread position: 98-357
Cow position: chr25:20629195-20629459 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 0

Conread position: 102-349
Cow position: chr25:18028006-18027755 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 188
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 206, 123

Conread position: 102-374
Cow position: chr25:11375724-11375450 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 264

Conread position: 112-648
Cow position: chr25:14015809-14016369 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 189

Conread position: 119-380
Cow position: chr25:12759959-12759692 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 176
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 78, 184

Conread position: 121-332
Cow position: chr25:12943796-12943583 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 198, 0

Conread position: 124-361
Cow position: chr25:34656801-34656559 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 0

Conread position: 171-409
Cow position: chr25:33991363-33991123 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 141, 14

Conread position: 217-357
Cow position: chr25:36240283-36240428 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 358-665
Cow position: chr25:17589640-17589336 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 76

Conread position: 362-648
Cow position: chr25:12759683-12759393 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 204
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 59, 86

Conread position: 362-648
Cow position: chr25:12942788-12942496 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 69

Conread position: 362-648
Cow position: chr25:20629490-20629775 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 72

Conread position: 362-650
Cow position: chr25:18890102-18889810 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 70

Conread position: 363-649
Cow position: chr25:11933612-11933325 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 58, 154

Conread position: 363-665
Cow position: chr25:11375434-11375130 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 71

Conread position: 363-665
Cow position: chr25:32579879-32580183 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 71

Conread position: 363-665
Cow position: chr25:34656531-34656228 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 24

Conread position: 363-665
Cow position: chr25:36240460-36240774 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 77

Conread position: 367-665
Cow position: chr25:18027708-18027407 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 67

Conread position: 373-665
Cow position: chr25:27022642-27022348 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 9

Conread position: 375-648
Cow position: chr25:8674841-8675120 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 59

Conread position: 382-665
Cow position: chr25:18092951-18093228 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 213
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 39, 53

Conread position: 382-665
Cow position: chr25:26922161-26922435 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 211
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 39, 52

Conread position: 474-664
Cow position: chr25:18303431-18303618 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 149
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 171, 0

Show alignments to all cow chromosomes.