Cow genome map
| Conread name: | Ova1-OVRM10078G07 |
| Conread position: | 3-263 |
| Cow position: | chr26:34012570-34012824 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 223, 31 |
| Conread position: | 6-311 |
| Cow position: | chr26:9846582-9846282 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 54 |
| Conread position: | 7-296 |
| Cow position: | chr26:8918534-8918817 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 29, 78 |
| Conread position: | 7-320 |
| Cow position: | chr26:19998034-19998347 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 307 |
| Conread position: | 7-340 |
| Cow position: | chr26:24201169-24201505 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 7-357 |
| Cow position: | chr26:2352801-2352455 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 129 |
| Conread position: | 7-361 |
| Cow position: | chr26:9112013-9112373 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 7-361 |
| Cow position: | chr26:12589013-12588658 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 70 |
| Conread position: | 7-414 |
| Cow position: | chr26:11254514-11254096 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 70 |
| Conread position: | 7-665 |
| Cow position: | chr26:2198193-2198865 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 129 |
| Conread position: | 7-665 |
| Cow position: | chr26:30782316-30782982 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 199 |
| Conread position: | 8-260 |
| Cow position: | chr26:30590692-30590439 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 185 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 8-306 |
| Cow position: | chr26:20262419-20262694 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 32, 11 |
| Conread position: | 8-654 |
| Cow position: | chr26:17397388-17396700 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 367 |
| Conread position: | 8-665 |
| Cow position: | chr26:19351965-19351275 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 673 |
| Conread position: | 9-357 |
| Cow position: | chr26:9563809-9563455 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 14-665 |
| Cow position: | chr26:3031255-3030590 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 265 |
| Conread position: | 38-408 |
| Cow position: | chr26:8869458-8869832 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 39 |
| Conread position: | 39-272 |
| Cow position: | chr26:19142302-19142535 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 37, 9 |
| Conread position: | 39-311 |
| Cow position: | chr26:12655540-12655798 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 23 |
| Conread position: | 62-665 |
| Cow position: | chr26:5674773-5675398 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 73 |
| Conread position: | 77-611 |
| Cow position: | chr26:20254696-20255242 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 14 |
| Conread position: | 81-665 |
| Cow position: | chr26:12574774-12574170 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 471 |
| Conread position: | 85-654 |
| Cow position: | chr26:8283415-8282830 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 170 |
| Conread position: | 86-609 |
| Cow position: | chr26:3074161-3074686 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 337 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 244, 94 |
| Conread position: | 94-361 |
| Cow position: | chr26:3691438-3691713 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 17 |
| Conread position: | 94-366 |
| Cow position: | chr26:23605274-23604986 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 210 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 141, 82 |
| Conread position: | 97-357 |
| Cow position: | chr26:6850536-6850271 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 0 |
| Conread position: | 98-409 |
| Cow position: | chr26:18854734-18855044 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 214, 100 |
| Conread position: | 100-665 |
| Cow position: | chr26:15145116-15144521 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 50 |
| Conread position: | 101-367 |
| Cow position: | chr26:15553608-15553350 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 202, 63 |
| Conread position: | 102-385 |
| Cow position: | chr26:4605537-4605252 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 203, 128 |
| Conread position: | 112-364 |
| Cow position: | chr26:16904440-16904687 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 133, 52 |
| Conread position: | 119-253 |
| Cow position: | chr26:35150212-35150078 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 111, 96 |
| Conread position: | 169-377 |
| Cow position: | chr26:11537122-11536911 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 106, 9 |
| Conread position: | 329-648 |
| Cow position: | chr26:9563457-9563133 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 105 |
| Conread position: | 329-665 |
| Cow position: | chr26:8918750-8919089 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 106 |
| Conread position: | 356-661 |
| Cow position: | chr26:12656218-12656510 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 81 |
| Conread position: | 356-665 |
| Cow position: | chr26:11254129-11253817 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 295 |
| Conread position: | 358-665 |
| Cow position: | chr26:8869807-8870121 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 226 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 63, 46 |
| Conread position: | 358-665 |
| Cow position: | chr26:12588635-12588324 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 76 |
| Conread position: | 362-665 |
| Cow position: | chr26:30589440-30589131 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 19 |
| Conread position: | 363-540 |
| Cow position: | chr26:11536897-11536719 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 91, 51 |
| Conread position: | 363-665 |
| Cow position: | chr26:4605247-4604948 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 18 |
| Conread position: | 368-665 |
| Cow position: | chr26:3691746-3692036 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 66 |
| Conread position: | 430-648 |
| Cow position: | chr26:9845570-9845353 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 8, 43 |
| Conread position: | 441-665 |
| Cow position: | chr26:23603748-23603528 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 444-655 |
| Cow position: | chr26:12666130-12666339 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 203, 29 |
| Conread position: | 459-665 |
| Cow position: | chr26:4334181-4334384 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 161 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 184, 0 |
| Conread position: | 465-654 |
| Cow position: | chr26:6849394-6849205 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 152 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 185, 56 |
Show alignments to all cow chromosomes.