Cow genome map


           Conread name:
           Ova1-OVRM10078G07
        

               Conread position:
               6-222
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               30, 55
               

               Conread position:
               6-236
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               30, 215
               

               Conread position:
               6-640
               

               Cow position:
               
               

               Alignm length:
               650
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 62
               

               Conread position:
               7-258
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               7-357
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 19
               

               Conread position:
               7-357
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               252
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               19, 210
               

               Conread position:
               7-357
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               7-358
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               7-361
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 192
               

               Conread position:
               7-361
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 76
               

               Conread position:
               7-402
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               279
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               29, 172
               

               Conread position:
               7-409
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               265
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               305, 165
               

               Conread position:
               7-409
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 18
               

               Conread position:
               7-636
               

               Cow position:
               
               

               Alignm length:
               671
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 253
               

               Conread position:
               7-665
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 160
               

               Conread position:
               8-348
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               249
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               28, 238
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               299, 27
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 19
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 84
               

               Conread position:
               8-363
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 212
               

               Conread position:
               8-367
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               8-648
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               481
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 433
               

               Conread position:
               8-648
               

               Cow position:
               
               

               Alignm length:
               643
               

               Alignm identity:
               476
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 306
               

               Conread position:
               8-664
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               488
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 361
               

               Conread position:
               8-665
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               483
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 75
               

               Conread position:
               8-665
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               481
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 668
               

               Conread position:
               8-665
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 151
               

               Conread position:
               8-665
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 63
               

               Conread position:
               8-665
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               489
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 178
               

               Conread position:
               9-665
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               482
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 19
               

               Conread position:
               14-592
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 245
               

               Conread position:
               25-665
               

               Cow position:
               
               

               Alignm length:
               672
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 31
               

               Conread position:
               29-648
               

               Cow position:
               
               

               Alignm length:
               650
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               283, 8
               

               Conread position:
               32-319
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               93, 79
               

               Conread position:
               37-348
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               277, 0
               

               Conread position:
               43-202
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               43-202
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               43-361
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               269, 36
               

               Conread position:
               46-366
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               261, 43
               

               Conread position:
               46-367
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 103
               

               Conread position:
               46-609
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               361
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               264, 47
               

               Conread position:
               53-368
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               159, 0
               

               Conread position:
               53-654
               

               Cow position:
               
               

               Alignm length:
               633
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 159
               

               Conread position:
               56-665
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               588, 0
               

               Conread position:
               62-640
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               257, 323
               

               Conread position:
               76-316
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               81-374
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               219
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               144, 78
               

               Conread position:
               81-665
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 532
               

               Conread position:
               94-357
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 76
               

               Conread position:
               99-305
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               101-664
               

               Cow position:
               
               

               Alignm length:
               598
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 145
               

               Conread position:
               101-664
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 147
               

               Conread position:
               102-357
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               194
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               197, 41
               

               Conread position:
               102-366
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               102-374
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 127
               

               Conread position:
               102-665
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 353
               

               Conread position:
               107-665
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 93
               

               Conread position:
               112-654
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               324
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               222, 15
               

               Conread position:
               114-361
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               94, 112
               

               Conread position:
               161-361
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               65, 118
               

               Conread position:
               175-654
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 9
               

               Conread position:
               211-361
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               101, 61
               

               Conread position:
               217-361
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               219-361
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               245-665
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 111
               

               Conread position:
               245-665
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 111
               

               Conread position:
               334-665
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 100
               

               Conread position:
               356-665
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 295
               

               Conread position:
               356-665
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 78
               

               Conread position:
               358-665
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 35
               

               Conread position:
               358-665
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 76
               

               Conread position:
               362-647
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 59
               

               Conread position:
               362-647
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 46
               

               Conread position:
               362-648
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 72
               

               Conread position:
               362-665
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 188
               

               Conread position:
               362-665
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 72
               

               Conread position:
               362-665
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 70
               

               Conread position:
               362-665
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 73
               

               Conread position:
               362-665
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 70
               

               Conread position:
               363-576
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               53, 69
               

               Conread position:
               363-665
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 219
               

               Conread position:
               363-665
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 71
               

               Conread position:
               363-665
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 57
               

               Conread position:
               363-665
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 71
               

               Conread position:
               363-665
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 71
               

               Conread position:
               367-648
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 67
               

               Conread position:
               376-648
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 58
               

               Conread position:
               420-648
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 13
               

               Conread position:
               507-665
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               39, 143
               

               Conread position:
               568-665
               

               Cow position:
               
               

               Alignm length:
               98
               

               Alignm identity:
               83
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               77, 0
               
Show alignments to all cow chromosomes.