Cow genome map


           Conread name:
           Ova1-OVRM10078G07
        

               Conread position:
               6-439
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               6-665
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               490
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 70
               

               Conread position:
               7-311
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 195
               

               Conread position:
               7-350
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               7-357
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               29, 96
               

               Conread position:
               7-361
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               253
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               29, 53
               

               Conread position:
               7-361
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 63
               

               Conread position:
               7-361
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               7-361
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 70
               

               Conread position:
               7-409
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 121
               

               Conread position:
               7-409
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 379
               

               Conread position:
               7-409
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 54
               

               Conread position:
               7-409
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               7-409
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               7-665
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 257
               

               Conread position:
               7-665
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 140
               

               Conread position:
               7-665
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 279
               

               Conread position:
               7-665
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 123
               

               Conread position:
               8-323
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 18
               

               Conread position:
               8-348
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               8-349
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 74
               

               Conread position:
               8-349
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               8-350
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               8-350
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 176
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 86
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 19
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 44
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               8-362
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 68
               

               Conread position:
               8-367
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 58
               

               Conread position:
               8-648
               

               Cow position:
               
               

               Alignm length:
               664
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 476
               

               Conread position:
               8-654
               

               Cow position:
               
               

               Alignm length:
               669
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 11
               

               Conread position:
               8-665
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 19
               

               Conread position:
               8-665
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 227
               

               Conread position:
               8-665
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               489
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 19
               

               Conread position:
               9-347
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 299
               

               Conread position:
               9-350
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               14-361
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               249
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               15-358
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 31
               

               Conread position:
               32-311
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 0
               

               Conread position:
               35-664
               

               Cow position:
               
               

               Alignm length:
               662
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 49
               

               Conread position:
               40-647
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               40-648
               

               Cow position:
               
               

               Alignm length:
               630
               

               Alignm identity:
               402
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               42, 29
               

               Conread position:
               41-232
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               27, 14
               

               Conread position:
               41-356
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               22, 156
               

               Conread position:
               49-368
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               97, 24
               

               Conread position:
               49-648
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 148
               

               Conread position:
               57-366
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               250, 19
               

               Conread position:
               57-665
               

               Cow position:
               
               

               Alignm length:
               632
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 27
               

               Conread position:
               60-358
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               219
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               63-304
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-665
               

               Cow position:
               
               

               Alignm length:
               633
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 612
               

               Conread position:
               74-643
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 10
               

               Conread position:
               77-358
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               244, 93
               

               Conread position:
               77-665
               

               Cow position:
               
               

               Alignm length:
               626
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               253, 236
               

               Conread position:
               81-374
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               229, 100
               

               Conread position:
               94-357
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               197
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               204, 125
               

               Conread position:
               102-323
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               126, 218
               

               Conread position:
               104-357
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               205, 31
               

               Conread position:
               132-361
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               94, 68
               

               Conread position:
               135-374
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               174, 67
               

               Conread position:
               169-361
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               200-591
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               265
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               38, 14
               

               Conread position:
               211-409
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               212-361
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               221-361
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               86, 13
               

               Conread position:
               262-665
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 193
               

               Conread position:
               329-665
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 105
               

               Conread position:
               356-664
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 76
               

               Conread position:
               356-665
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 78
               

               Conread position:
               358-665
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 76
               

               Conread position:
               358-665
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 293
               

               Conread position:
               358-665
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 76
               

               Conread position:
               358-665
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 76
               

               Conread position:
               358-665
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 76
               

               Conread position:
               358-665
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 76
               

               Conread position:
               361-665
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 73
               

               Conread position:
               362-648
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 72
               

               Conread position:
               362-648
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 72
               

               Conread position:
               362-648
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 137
               

               Conread position:
               362-665
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 72
               

               Conread position:
               362-665
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 287
               

               Conread position:
               362-665
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 73
               

               Conread position:
               362-665
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 289
               

               Conread position:
               362-665
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 73
               

               Conread position:
               363-665
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 154
               

               Conread position:
               363-665
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               222
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               69, 58
               

               Conread position:
               363-665
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 58
               

               Conread position:
               379-648
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 55
               

               Conread position:
               440-648
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               165
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               502-665
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               89, 150
               

               Conread position:
               510-665
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               135, 0
               
Show alignments to all cow chromosomes.