Cow genome map
| Conread name: | Ova1-OVRM10078G07 |
| Conread position: | 3-326 |
| Cow position: | chr5:41963611-41963299 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 312, 26 |
| Conread position: | 3-357 |
| Cow position: | chr5:49594144-49593791 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 73 |
| Conread position: | 3-665 |
| Cow position: | chr5:61273850-61273184 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 86 |
| Conread position: | 5-665 |
| Cow position: | chr5:41530252-41529590 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 78 |
| Conread position: | 6-358 |
| Cow position: | chr5:23716631-23716283 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 70 |
| Conread position: | 6-385 |
| Cow position: | chr5:12682181-12681824 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 40 |
| Conread position: | 7-342 |
| Cow position: | chr5:10443891-10443555 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 242 |
| Conread position: | 7-349 |
| Cow position: | chr5:23960797-23960451 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 7-361 |
| Cow position: | chr5:3963790-3964141 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 67 |
| Conread position: | 7-361 |
| Cow position: | chr5:10844562-10844204 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 67 |
| Conread position: | 7-361 |
| Cow position: | chr5:27909957-27909600 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 7-363 |
| Cow position: | chr5:59059929-59060293 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 7-367 |
| Cow position: | chr5:46663316-46663675 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 203 |
| Conread position: | 7-400 |
| Cow position: | chr5:18663558-18663957 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 7-409 |
| Cow position: | chr5:2530587-2530990 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 112 |
| Conread position: | 7-409 |
| Cow position: | chr5:14379479-14379882 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 193 |
| Conread position: | 7-409 |
| Cow position: | chr5:26079907-26079499 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 105 |
| Conread position: | 7-409 |
| Cow position: | chr5:53714567-53714973 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 84 |
| Conread position: | 7-409 |
| Cow position: | chr5:58195313-58195721 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 179 |
| Conread position: | 7-409 |
| Cow position: | chr5:59144090-59144501 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 384 |
| Conread position: | 7-409 |
| Cow position: | chr5:59481562-59481974 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 277 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 29, 250 |
| Conread position: | 7-560 |
| Cow position: | chr5:34695897-34696484 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 59 |
| Conread position: | 7-610 |
| Cow position: | chr5:7273178-7273804 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 19 |
| Conread position: | 7-664 |
| Cow position: | chr5:4019887-4019196 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 105 |
| Conread position: | 7-665 |
| Cow position: | chr5:10776933-10776261 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 49 |
| Conread position: | 7-665 |
| Cow position: | chr5:31705888-31706577 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 227 |
| Conread position: | 7-665 |
| Cow position: | chr5:32771793-32772485 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 105 |
| Conread position: | 7-665 |
| Cow position: | chr5:45182781-45182100 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 71 |
| Conread position: | 7-665 |
| Cow position: | chr5:46644025-46644690 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 382, 29 |
| Conread position: | 7-665 |
| Cow position: | chr5:46775403-46776083 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 190 |
| Conread position: | 7-665 |
| Cow position: | chr5:47831782-47831108 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 140 |
| Conread position: | 8-349 |
| Cow position: | chr5:2913763-2914109 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 49 |
| Conread position: | 8-357 |
| Cow position: | chr5:1342484-1342127 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 8-357 |
| Cow position: | chr5:2430820-2430466 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 19 |
| Conread position: | 8-357 |
| Cow position: | chr5:3504930-3504580 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 19 |
| Conread position: | 8-357 |
| Cow position: | chr5:24097962-24098315 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 27 |
| Conread position: | 8-357 |
| Cow position: | chr5:37731657-37732012 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 8-357 |
| Cow position: | chr5:54793306-54792951 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 8-357 |
| Cow position: | chr5:59282074-59282429 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 8-361 |
| Cow position: | chr5:4068302-4068661 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 8-361 |
| Cow position: | chr5:30088395-30088050 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 33, 134 |
| Conread position: | 8-363 |
| Cow position: | chr5:416408-416050 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 209 |
| Conread position: | 8-363 |
| Cow position: | chr5:30578637-30578995 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 151 |
| Conread position: | 8-367 |
| Cow position: | chr5:49119964-49119605 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 38 |
| Conread position: | 8-372 |
| Cow position: | chr5:10918116-10918479 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 60 |
| Conread position: | 8-648 |
| Cow position: | chr5:3785123-3785779 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 507 |
| Conread position: | 8-665 |
| Cow position: | chr5:55627317-55627989 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 18 |
| Conread position: | 9-665 |
| Cow position: | chr5:32945193-32945877 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 12 |
| Conread position: | 10-393 |
| Cow position: | chr5:56858387-56857991 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 28, 9 |
| Conread position: | 11-652 |
| Cow position: | chr5:49100959-49101626 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 430 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 38, 8 |
| Conread position: | 14-309 |
| Cow position: | chr5:42504082-42504369 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 22, 55 |
| Conread position: | 14-409 |
| Cow position: | chr5:24576232-24576633 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 63 |
| Conread position: | 14-665 |
| Cow position: | chr5:48468954-48468276 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 70 |
| Conread position: | 15-252 |
| Cow position: | chr5:73490006-73489769 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 19, 11 |
| Conread position: | 15-361 |
| Cow position: | chr5:37755820-37755468 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 15-665 |
| Cow position: | chr5:32674405-32673737 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 61 |
| Conread position: | 22-357 |
| Cow position: | chr5:48809386-48809049 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 55 |
| Conread position: | 36-374 |
| Cow position: | chr5:6158852-6158513 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 116 |
| Conread position: | 36-468 |
| Cow position: | chr5:27000554-27000983 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 300 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 271, 24 |
| Conread position: | 37-665 |
| Cow position: | chr5:64782671-64782015 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 54 |
| Conread position: | 39-299 |
| Cow position: | chr5:23688127-23687866 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 0 |
| Conread position: | 39-357 |
| Cow position: | chr5:46739238-46738918 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 122 |
| Conread position: | 39-360 |
| Cow position: | chr5:46659057-46659393 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 180, 53 |
| Conread position: | 39-361 |
| Cow position: | chr5:58747241-58747555 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 233 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 264, 31 |
| Conread position: | 42-374 |
| Cow position: | chr5:34167428-34167743 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 22, 45 |
| Conread position: | 43-361 |
| Cow position: | chr5:4384583-4384897 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 48 |
| Conread position: | 46-236 |
| Cow position: | chr5:46006080-46005889 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 173, 0 |
| Conread position: | 46-317 |
| Cow position: | chr5:25001565-25001301 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 177, 19 |
| Conread position: | 46-361 |
| Cow position: | chr5:6519255-6519557 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 46-654 |
| Cow position: | chr5:49128608-49129216 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 49 |
| Conread position: | 49-409 |
| Cow position: | chr5:35299417-35299783 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 263, 339 |
| Conread position: | 50-361 |
| Cow position: | chr5:26090476-26090155 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 221 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 41, 110 |
| Conread position: | 53-357 |
| Cow position: | chr5:57483192-57482880 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 53-372 |
| Cow position: | chr5:27488388-27488701 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 64, 56 |
| Conread position: | 53-664 |
| Cow position: | chr5:34202309-34202937 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 57 |
| Conread position: | 59-665 |
| Cow position: | chr5:46631048-46630438 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 121 |
| Conread position: | 60-341 |
| Cow position: | chr5:76124189-76123905 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 188 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 11, 122 |
| Conread position: | 77-646 |
| Cow position: | chr5:23227642-23228218 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 172 |
| Conread position: | 79-364 |
| Cow position: | chr5:28570073-28570371 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 142 |
| Conread position: | 81-665 |
| Cow position: | chr5:49181672-49182271 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 149 |
| Conread position: | 84-351 |
| Cow position: | chr5:52804723-52804997 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 0 |
| Conread position: | 85-455 |
| Cow position: | chr5:68472172-68471801 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 221, 134 |
| Conread position: | 88-409 |
| Cow position: | chr5:18665354-18665681 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 0 |
| Conread position: | 89-361 |
| Cow position: | chr5:26769207-26769481 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 208 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 126, 155 |
| Conread position: | 91-361 |
| Cow position: | chr5:39165401-39165127 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 11 |
| Conread position: | 93-665 |
| Cow position: | chr5:32733844-32733249 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 18 |
| Conread position: | 94-232 |
| Cow position: | chr5:55149895-55149759 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 94-661 |
| Cow position: | chr5:28030892-28031476 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 360 |
| Conread position: | 94-665 |
| Cow position: | chr5:9687008-9686425 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 106 |
| Conread position: | 94-665 |
| Cow position: | chr5:24329693-24330276 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 387 |
| Conread position: | 94-665 |
| Cow position: | chr5:45699680-45700269 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 41 |
| Conread position: | 109-374 |
| Cow position: | chr5:41551509-41551242 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 107 |
| Conread position: | 113-349 |
| Cow position: | chr5:12644457-12644215 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 116-361 |
| Cow position: | chr5:29008782-29009030 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 187 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 193, 110 |
| Conread position: | 128-350 |
| Cow position: | chr5:12185093-12185320 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 0 |
| Conread position: | 133-373 |
| Cow position: | chr5:31102155-31101915 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 180, 85 |
| Conread position: | 142-358 |
| Cow position: | chr5:29123346-29123130 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 170, 7 |
| Conread position: | 146-347 |
| Cow position: | chr5:27652530-27652338 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 166, 15 |
| Conread position: | 160-357 |
| Cow position: | chr5:54932753-54932551 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 207-665 |
| Cow position: | chr5:27569668-27570115 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 27 |
| Conread position: | 210-409 |
| Cow position: | chr5:29042026-29042231 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 214-409 |
| Cow position: | chr5:44459001-44459202 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 229-648 |
| Cow position: | chr5:29436383-29435975 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 87 |
| Conread position: | 356-643 |
| Cow position: | chr5:4088496-4088789 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 78 |
| Conread position: | 356-648 |
| Cow position: | chr5:5318065-5317768 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 78 |
| Conread position: | 356-665 |
| Cow position: | chr5:29042203-29042514 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 78 |
| Conread position: | 358-651 |
| Cow position: | chr5:27909577-27909280 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 76 |
| Conread position: | 358-665 |
| Cow position: | chr5:3964164-3964467 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 222 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 63, 76 |
| Conread position: | 358-665 |
| Cow position: | chr5:46663692-46664006 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 76 |
| Conread position: | 362-648 |
| Cow position: | chr5:2430435-2430143 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 72 |
| Conread position: | 362-648 |
| Cow position: | chr5:57482849-57482557 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 72 |
| Conread position: | 362-649 |
| Cow position: | chr5:26069016-26068732 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 59 |
| Conread position: | 362-654 |
| Cow position: | chr5:1342096-1341800 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 72 |
| Conread position: | 362-665 |
| Cow position: | chr5:2914148-2914454 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 70 |
| Conread position: | 362-665 |
| Cow position: | chr5:6158497-6158194 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 72 |
| Conread position: | 362-665 |
| Cow position: | chr5:27652284-27651979 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 66 |
| Conread position: | 362-665 |
| Cow position: | chr5:30579020-30579325 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 288 |
| Conread position: | 362-665 |
| Cow position: | chr5:34696282-34696605 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 232 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 59, 72 |
| Conread position: | 362-665 |
| Cow position: | chr5:37732043-37732349 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 74 |
| Conread position: | 362-665 |
| Cow position: | chr5:46738887-46738582 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 72 |
| Conread position: | 363-575 |
| Cow position: | chr5:46005685-46005460 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 58, 70 |
| Conread position: | 363-648 |
| Cow position: | chr5:48809017-48808726 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 71 |
| Conread position: | 363-650 |
| Cow position: | chr5:49593757-49593464 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 41 |
| Conread position: | 363-665 |
| Cow position: | chr5:2530969-2531274 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 71 |
| Conread position: | 363-665 |
| Cow position: | chr5:14379861-14380166 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 71 |
| Conread position: | 363-665 |
| Cow position: | chr5:26079520-26079215 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 71 |
| Conread position: | 363-665 |
| Cow position: | chr5:29009058-29009358 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 69 |
| Conread position: | 363-665 |
| Cow position: | chr5:39165099-39164797 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 71 |
| Conread position: | 363-665 |
| Cow position: | chr5:46659430-46659718 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 58, 75 |
| Conread position: | 367-665 |
| Cow position: | chr5:416020-415719 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 67 |
| Conread position: | 379-648 |
| Cow position: | chr5:10918512-10918787 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 55 |
| Conread position: | 382-665 |
| Cow position: | chr5:41962521-41962235 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 39 |
| Conread position: | 382-665 |
| Cow position: | chr5:59060338-59060621 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 52 |
| Conread position: | 382-665 |
| Cow position: | chr5:59481972-59482256 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 52 |
| Conread position: | 395-665 |
| Cow position: | chr5:49518390-49518661 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 41 |
| Conread position: | 420-648 |
| Cow position: | chr5:32249809-32250034 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 420-648 |
| Cow position: | chr5:53627003-53626771 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 113, 22 |
| Conread position: | 425-648 |
| Cow position: | chr5:25000879-25000654 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 430-647 |
| Cow position: | chr5:31202851-31202637 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 38, 14 |
| Conread position: | 435-620 |
| Cow position: | chr5:39247606-39247423 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 153 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 451-665 |
| Cow position: | chr5:73489769-73489558 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 194, 0 |
| Conread position: | 456-665 |
| Cow position: | chr5:18653838-18654048 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 41, 193 |
| Conread position: | 474-665 |
| Cow position: | chr5:27489063-27489250 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 151 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 506-647 |
| Cow position: | chr5:12644091-12643951 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 84, 0 |
Show alignments to all cow chromosomes.