Cow genome map

Conread name: Ova1-OVRM10078G07

Conread position: 3-326
Cow position:
Alignm length: 326
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 26

Conread position: 3-357
Cow position:
Alignm length: 363
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 73

Conread position: 3-665
Cow position:
Alignm length: 695
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 86

Conread position: 5-665
Cow position:
Alignm length: 682
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 78

Conread position: 6-358
Cow position:
Alignm length: 356
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 70

Conread position: 6-385
Cow position:
Alignm length: 381
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 40

Conread position: 7-342
Cow position:
Alignm length: 340
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 242

Conread position: 7-349
Cow position:
Alignm length: 347
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 7-361
Cow position:
Alignm length: 361
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 67

Conread position: 7-361
Cow position:
Alignm length: 361
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 67

Conread position: 7-361
Cow position:
Alignm length: 358
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 7-363
Cow position:
Alignm length: 365
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 7-367
Cow position:
Alignm length: 367
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 203

Conread position: 7-400
Cow position:
Alignm length: 400
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 7-409
Cow position:
Alignm length: 411
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 112

Conread position: 7-409
Cow position:
Alignm length: 412
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 193

Conread position: 7-409
Cow position:
Alignm length: 410
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 105

Conread position: 7-409
Cow position:
Alignm length: 409
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 84

Conread position: 7-409
Cow position:
Alignm length: 412
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 179

Conread position: 7-409
Cow position:
Alignm length: 413
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 384

Conread position: 7-409
Cow position:
Alignm length: 415
Alignm identity: 277
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 29, 250

Conread position: 7-560
Cow position:
Alignm length: 591
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 59

Conread position: 7-610
Cow position:
Alignm length: 630
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 19

Conread position: 7-664
Cow position:
Alignm length: 701
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 105

Conread position: 7-665
Cow position:
Alignm length: 685
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 49

Conread position: 7-665
Cow position:
Alignm length: 699
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 227

Conread position: 7-665
Cow position:
Alignm length: 702
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 105

Conread position: 7-665
Cow position:
Alignm length: 696
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 71

Conread position: 7-665
Cow position:
Alignm length: 678
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 382, 29

Conread position: 7-665
Cow position:
Alignm length: 694
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 190

Conread position: 7-665
Cow position:
Alignm length: 691
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 140

Conread position: 8-349
Cow position:
Alignm length: 348
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 49

Conread position: 8-357
Cow position:
Alignm length: 358
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 8-357
Cow position:
Alignm length: 357
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 19

Conread position: 8-357
Cow position:
Alignm length: 357
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 19

Conread position: 8-357
Cow position:
Alignm length: 357
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 27

Conread position: 8-357
Cow position:
Alignm length: 356
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 8-357
Cow position:
Alignm length: 356
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 8-357
Cow position:
Alignm length: 356
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 8-361
Cow position:
Alignm length: 360
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 8-361
Cow position:
Alignm length: 359
Alignm identity: 238
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 33, 134

Conread position: 8-363
Cow position:
Alignm length: 360
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 209

Conread position: 8-363
Cow position:
Alignm length: 362
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 151

Conread position: 8-367
Cow position:
Alignm length: 362
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 38

Conread position: 8-372
Cow position:
Alignm length: 371
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 60

Conread position: 8-648
Cow position:
Alignm length: 660
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 507

Conread position: 8-665
Cow position:
Alignm length: 679
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 18

Conread position: 9-665
Cow position:
Alignm length: 690
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 12

Conread position: 10-393
Cow position:
Alignm length: 399
Alignm identity: 253
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 28, 9

Conread position: 11-652
Cow position:
Alignm length: 684
Alignm identity: 430
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 8

Conread position: 14-309
Cow position:
Alignm length: 297
Alignm identity: 202
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 22, 55

Conread position: 14-409
Cow position:
Alignm length: 405
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 63

Conread position: 14-665
Cow position:
Alignm length: 687
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 70

Conread position: 15-252
Cow position:
Alignm length: 239
Alignm identity: 174
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 19, 11

Conread position: 15-361
Cow position:
Alignm length: 353
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 15-665
Cow position:
Alignm length: 685
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 61

Conread position: 22-357
Cow position:
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 55

Conread position: 36-374
Cow position:
Alignm length: 344
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 116

Conread position: 36-468
Cow position:
Alignm length: 450
Alignm identity: 300
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 271, 24

Conread position: 37-665
Cow position:
Alignm length: 664
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 54

Conread position: 39-299
Cow position:
Alignm length: 262
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 0

Conread position: 39-357
Cow position:
Alignm length: 324
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 122

Conread position: 39-360
Cow position:
Alignm length: 340
Alignm identity: 238
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 180, 53

Conread position: 39-361
Cow position:
Alignm length: 327
Alignm identity: 233
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 264, 31

Conread position: 42-374
Cow position:
Alignm length: 335
Alignm identity: 216
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 22, 45

Conread position: 43-361
Cow position:
Alignm length: 321
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 48

Conread position: 46-236
Cow position:
Alignm length: 192
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 173, 0

Conread position: 46-317
Cow position:
Alignm length: 273
Alignm identity: 184
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 177, 19

Conread position: 46-361
Cow position:
Alignm length: 316
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 46-654
Cow position:
Alignm length: 630
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 49

Conread position: 49-409
Cow position:
Alignm length: 368
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 339

Conread position: 50-361
Cow position:
Alignm length: 324
Alignm identity: 221
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 41, 110

Conread position: 53-357
Cow position:
Alignm length: 313
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 53-372
Cow position:
Alignm length: 327
Alignm identity: 221
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 64, 56

Conread position: 53-664
Cow position:
Alignm length: 646
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 57

Conread position: 59-665
Cow position:
Alignm length: 629
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 121

Conread position: 60-341
Cow position:
Alignm length: 287
Alignm identity: 188
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 11, 122

Conread position: 77-646
Cow position:
Alignm length: 585
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 172

Conread position: 79-364
Cow position:
Alignm length: 300
Alignm identity: 196
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 142

Conread position: 81-665
Cow position:
Alignm length: 614
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 149

Conread position: 84-351
Cow position:
Alignm length: 275
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 0

Conread position: 85-455
Cow position:
Alignm length: 377
Alignm identity: 235
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 221, 134

Conread position: 88-409
Cow position:
Alignm length: 328
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 0

Conread position: 89-361
Cow position:
Alignm length: 283
Alignm identity: 208
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 126, 155

Conread position: 91-361
Cow position:
Alignm length: 276
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 11

Conread position: 93-665
Cow position:
Alignm length: 603
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 18

Conread position: 94-232
Cow position:
Alignm length: 139
Alignm identity: 106
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 106, 0

Conread position: 94-661
Cow position:
Alignm length: 589
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 360

Conread position: 94-665
Cow position:
Alignm length: 596
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 106

Conread position: 94-665
Cow position:
Alignm length: 589
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 387

Conread position: 94-665
Cow position:
Alignm length: 596
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 41

Conread position: 109-374
Cow position:
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 107

Conread position: 113-349
Cow position:
Alignm length: 243
Alignm identity: 179
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 57, 0

Conread position: 116-361
Cow position:
Alignm length: 251
Alignm identity: 187
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 193, 110

Conread position: 128-350
Cow position:
Alignm length: 228
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 0

Conread position: 133-373
Cow position:
Alignm length: 246
Alignm identity: 180
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 180, 85

Conread position: 142-358
Cow position:
Alignm length: 220
Alignm identity: 149
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 170, 7

Conread position: 146-347
Cow position:
Alignm length: 203
Alignm identity: 152
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 166, 15

Conread position: 160-357
Cow position:
Alignm length: 203
Alignm identity: 152
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 152, 0

Conread position: 207-665
Cow position:
Alignm length: 469
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 27

Conread position: 210-409
Cow position:
Alignm length: 206
Alignm identity: 146
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 102, 0

Conread position: 214-409
Cow position:
Alignm length: 202
Alignm identity: 143
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 229-648
Cow position:
Alignm length: 426
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 87

Conread position: 356-643
Cow position:
Alignm length: 295
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 78

Conread position: 356-648
Cow position:
Alignm length: 300
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 78

Conread position: 356-665
Cow position:
Alignm length: 317
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 78

Conread position: 358-651
Cow position:
Alignm length: 301
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 76

Conread position: 358-665
Cow position:
Alignm length: 315
Alignm identity: 222
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 63, 76

Conread position: 358-665
Cow position:
Alignm length: 319
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 76

Conread position: 362-648
Cow position:
Alignm length: 294
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 72

Conread position: 362-648
Cow position:
Alignm length: 294
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 72

Conread position: 362-649
Cow position:
Alignm length: 291
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 59

Conread position: 362-654
Cow position:
Alignm length: 300
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 72

Conread position: 362-665
Cow position:
Alignm length: 311
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 70

Conread position: 362-665
Cow position:
Alignm length: 311
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 72

Conread position: 362-665
Cow position:
Alignm length: 312
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 66

Conread position: 362-665
Cow position:
Alignm length: 309
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 288

Conread position: 362-665
Cow position:
Alignm length: 328
Alignm identity: 232
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 59, 72

Conread position: 362-665
Cow position:
Alignm length: 311
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 74

Conread position: 362-665
Cow position:
Alignm length: 311
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 72

Conread position: 363-575
Cow position:
Alignm length: 227
Alignm identity: 167
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 58, 70

Conread position: 363-648
Cow position:
Alignm length: 293
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 71

Conread position: 363-650
Cow position:
Alignm length: 296
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 41

Conread position: 363-665
Cow position:
Alignm length: 310
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 71

Conread position: 363-665
Cow position:
Alignm length: 310
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 71

Conread position: 363-665
Cow position:
Alignm length: 310
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 71

Conread position: 363-665
Cow position:
Alignm length: 306
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 69

Conread position: 363-665
Cow position:
Alignm length: 309
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 71

Conread position: 363-665
Cow position:
Alignm length: 304
Alignm identity: 207
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 58, 75

Conread position: 367-665
Cow position:
Alignm length: 306
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 67

Conread position: 379-648
Cow position:
Alignm length: 277
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 55

Conread position: 382-665
Cow position:
Alignm length: 291
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 39

Conread position: 382-665
Cow position:
Alignm length: 292
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 52

Conread position: 382-665
Cow position:
Alignm length: 291
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 52

Conread position: 395-665
Cow position:
Alignm length: 278
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 41

Conread position: 420-648
Cow position:
Alignm length: 229
Alignm identity: 157
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 13, 0

Conread position: 420-648
Cow position:
Alignm length: 236
Alignm identity: 162
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 113, 22

Conread position: 425-648
Cow position:
Alignm length: 226
Alignm identity: 171
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 59, 0

Conread position: 430-647
Cow position:
Alignm length: 219
Alignm identity: 151
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 38, 14

Conread position: 435-620
Cow position:
Alignm length: 186
Alignm identity: 153
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 451-665
Cow position:
Alignm length: 215
Alignm identity: 132
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 194, 0

Conread position: 456-665
Cow position:
Alignm length: 214
Alignm identity: 157
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 41, 193

Conread position: 474-665
Cow position:
Alignm length: 192
Alignm identity: 151
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 506-647
Cow position:
Alignm length: 142
Alignm identity: 115
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 84, 0

Show alignments to all cow chromosomes.