Cow genome map

Conread name: Ova1-OVRM10078G07

Conread position: 3-357
Cow position:
Alignm length: 356
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 73

Conread position: 3-665
Cow position:
Alignm length: 674
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 134

Conread position: 5-357
Cow position:
Alignm length: 355
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 59

Conread position: 5-363
Cow position:
Alignm length: 361
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 78

Conread position: 6-357
Cow position:
Alignm length: 358
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 216

Conread position: 6-361
Cow position:
Alignm length: 357
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 229

Conread position: 6-367
Cow position:
Alignm length: 392
Alignm identity: 274
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 15, 335

Conread position: 7-295
Cow position:
Alignm length: 303
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 200

Conread position: 7-348
Cow position:
Alignm length: 349
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 78

Conread position: 7-349
Cow position:
Alignm length: 349
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 7-357
Cow position:
Alignm length: 357
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 19

Conread position: 7-357
Cow position:
Alignm length: 357
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 19

Conread position: 7-361
Cow position:
Alignm length: 362
Alignm identity: 250
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 31, 193

Conread position: 7-361
Cow position:
Alignm length: 363
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 18

Conread position: 7-361
Cow position:
Alignm length: 358
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 18

Conread position: 7-361
Cow position:
Alignm length: 361
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 35

Conread position: 7-361
Cow position:
Alignm length: 361
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 192

Conread position: 7-361
Cow position:
Alignm length: 362
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 7-361
Cow position:
Alignm length: 361
Alignm identity: 250
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 29, 129

Conread position: 7-361
Cow position:
Alignm length: 361
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 7-363
Cow position:
Alignm length: 364
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 182

Conread position: 7-366
Cow position:
Alignm length: 379
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 7-374
Cow position:
Alignm length: 374
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 158

Conread position: 7-388
Cow position:
Alignm length: 389
Alignm identity: 267
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 29, 64

Conread position: 7-409
Cow position:
Alignm length: 410
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 64

Conread position: 7-409
Cow position:
Alignm length: 410
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 80

Conread position: 7-409
Cow position:
Alignm length: 410
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 101

Conread position: 7-409
Cow position:
Alignm length: 415
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 210

Conread position: 7-409
Cow position:
Alignm length: 410
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 199

Conread position: 7-409
Cow position:
Alignm length: 410
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 7-665
Cow position:
Alignm length: 698
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 677

Conread position: 8-236
Cow position:
Alignm length: 230
Alignm identity: 161
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 28, 178

Conread position: 8-272
Cow position:
Alignm length: 268
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 84

Conread position: 8-321
Cow position:
Alignm length: 315
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 13

Conread position: 8-348
Cow position:
Alignm length: 347
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 84

Conread position: 8-349
Cow position:
Alignm length: 348
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 163

Conread position: 8-357
Cow position:
Alignm length: 354
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 218

Conread position: 8-357
Cow position:
Alignm length: 356
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 8-357
Cow position:
Alignm length: 353
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 53

Conread position: 8-357
Cow position:
Alignm length: 356
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 129

Conread position: 8-357
Cow position:
Alignm length: 356
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 72

Conread position: 8-357
Cow position:
Alignm length: 356
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 151

Conread position: 8-357
Cow position:
Alignm length: 356
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 8-367
Cow position:
Alignm length: 363
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 210

Conread position: 8-402
Cow position:
Alignm length: 404
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 204

Conread position: 8-643
Cow position:
Alignm length: 659
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 68

Conread position: 8-648
Cow position:
Alignm length: 669
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 8-654
Cow position:
Alignm length: 679
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 8-665
Cow position:
Alignm length: 691
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 97

Conread position: 8-665
Cow position:
Alignm length: 691
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 43

Conread position: 9-193
Cow position:
Alignm length: 186
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 9-350
Cow position:
Alignm length: 348
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 144

Conread position: 10-649
Cow position:
Alignm length: 649
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 140

Conread position: 14-317
Cow position:
Alignm length: 311
Alignm identity: 208
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 47, 13

Conread position: 14-665
Cow position:
Alignm length: 683
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 71

Conread position: 32-260
Cow position:
Alignm length: 229
Alignm identity: 165
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 32-350
Cow position:
Alignm length: 325
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 61

Conread position: 32-357
Cow position:
Alignm length: 331
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 262

Conread position: 32-357
Cow position:
Alignm length: 328
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 0

Conread position: 32-357
Cow position:
Alignm length: 331
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 61

Conread position: 32-361
Cow position:
Alignm length: 344
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 211

Conread position: 32-665
Cow position:
Alignm length: 677
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 656

Conread position: 34-245
Cow position:
Alignm length: 212
Alignm identity: 149
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 35-386
Cow position:
Alignm length: 352
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 36-357
Cow position:
Alignm length: 331
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 54

Conread position: 36-374
Cow position:
Alignm length: 344
Alignm identity: 236
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 276, 179

Conread position: 37-357
Cow position:
Alignm length: 326
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 209

Conread position: 37-374
Cow position:
Alignm length: 349
Alignm identity: 237
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 177, 112

Conread position: 37-665
Cow position:
Alignm length: 660
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 54

Conread position: 38-361
Cow position:
Alignm length: 328
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 127

Conread position: 39-323
Cow position:
Alignm length: 294
Alignm identity: 212
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 24, 6

Conread position: 39-361
Cow position:
Alignm length: 331
Alignm identity: 211
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 172

Conread position: 40-364
Cow position:
Alignm length: 334
Alignm identity: 220
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 52

Conread position: 40-654
Cow position:
Alignm length: 623
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 103

Conread position: 41-350
Cow position:
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 55

Conread position: 43-295
Cow position:
Alignm length: 253
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 0

Conread position: 43-368
Cow position:
Alignm length: 328
Alignm identity: 212
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 21, 42

Conread position: 43-374
Cow position:
Alignm length: 337
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 314

Conread position: 46-367
Cow position:
Alignm length: 328
Alignm identity: 207
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 36, 175

Conread position: 46-374
Cow position:
Alignm length: 335
Alignm identity: 235
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 173, 24

Conread position: 46-599
Cow position:
Alignm length: 573
Alignm identity: 359
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 38, 24

Conread position: 48-648
Cow position:
Alignm length: 620
Alignm identity: 390
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 320, 38

Conread position: 56-594
Cow position:
Alignm length: 554
Alignm identity: 340
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 20, 57

Conread position: 59-274
Cow position:
Alignm length: 216
Alignm identity: 143
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 150, 0

Conread position: 62-357
Cow position:
Alignm length: 299
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 62-357
Cow position:
Alignm length: 298
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 233

Conread position: 63-350
Cow position:
Alignm length: 298
Alignm identity: 208
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 56, 22

Conread position: 77-320
Cow position:
Alignm length: 244
Alignm identity: 183
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 153, 0

Conread position: 81-358
Cow position:
Alignm length: 279
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 201

Conread position: 81-361
Cow position:
Alignm length: 289
Alignm identity: 200
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 27, 16

Conread position: 81-366
Cow position:
Alignm length: 287
Alignm identity: 205
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 154, 54

Conread position: 84-648
Cow position:
Alignm length: 574
Alignm identity: 356
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 147, 226

Conread position: 94-361
Cow position:
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 173

Conread position: 94-366
Cow position:
Alignm length: 273
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 96-357
Cow position:
Alignm length: 264
Alignm identity: 193
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 219, 104

Conread position: 96-409
Cow position:
Alignm length: 320
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 113

Conread position: 101-647
Cow position:
Alignm length: 565
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 38

Conread position: 102-361
Cow position:
Alignm length: 273
Alignm identity: 204
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 64, 202

Conread position: 103-374
Cow position:
Alignm length: 272
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 0

Conread position: 107-361
Cow position:
Alignm length: 266
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 112-260
Cow position:
Alignm length: 150
Alignm identity: 120
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 104, 0

Conread position: 112-372
Cow position:
Alignm length: 267
Alignm identity: 199
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 137, 86

Conread position: 113-350
Cow position:
Alignm length: 243
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 0

Conread position: 204-665
Cow position:
Alignm length: 501
Alignm identity: 340
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 34, 93

Conread position: 214-356
Cow position:
Alignm length: 149
Alignm identity: 118
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 94, 19

Conread position: 314-665
Cow position:
Alignm length: 360
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 32

Conread position: 356-665
Cow position:
Alignm length: 313
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 78

Conread position: 358-645
Cow position:
Alignm length: 289
Alignm identity: 205
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 63, 76

Conread position: 358-665
Cow position:
Alignm length: 315
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 75

Conread position: 358-665
Cow position:
Alignm length: 317
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 76

Conread position: 358-665
Cow position:
Alignm length: 308
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 358-665
Cow position:
Alignm length: 320
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 204

Conread position: 358-665
Cow position:
Alignm length: 314
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 77

Conread position: 362-573
Cow position:
Alignm length: 219
Alignm identity: 167
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 59, 72

Conread position: 362-648
Cow position:
Alignm length: 299
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 72

Conread position: 362-654
Cow position:
Alignm length: 303
Alignm identity: 215
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 44, 19

Conread position: 362-665
Cow position:
Alignm length: 323
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 300

Conread position: 362-665
Cow position:
Alignm length: 311
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 72

Conread position: 362-665
Cow position:
Alignm length: 312
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 289

Conread position: 362-665
Cow position:
Alignm length: 307
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 72

Conread position: 362-665
Cow position:
Alignm length: 311
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 72

Conread position: 362-665
Cow position:
Alignm length: 311
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 72

Conread position: 362-665
Cow position:
Alignm length: 316
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 70

Conread position: 362-665
Cow position:
Alignm length: 311
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 72

Conread position: 363-665
Cow position:
Alignm length: 312
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 69

Conread position: 363-665
Cow position:
Alignm length: 311
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 71

Conread position: 363-665
Cow position:
Alignm length: 310
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 71

Conread position: 363-665
Cow position:
Alignm length: 310
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 71

Conread position: 367-654
Cow position:
Alignm length: 295
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 67

Conread position: 367-665
Cow position:
Alignm length: 312
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 67

Conread position: 370-665
Cow position:
Alignm length: 303
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 65

Conread position: 379-665
Cow position:
Alignm length: 294
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 55

Conread position: 382-621
Cow position:
Alignm length: 246
Alignm identity: 185
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 35, 50

Conread position: 382-665
Cow position:
Alignm length: 291
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 52

Conread position: 382-665
Cow position:
Alignm length: 293
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 395-660
Cow position:
Alignm length: 268
Alignm identity: 188
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 26, 39

Conread position: 395-665
Cow position:
Alignm length: 278
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 39

Conread position: 405-665
Cow position:
Alignm length: 268
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 29

Conread position: 420-648
Cow position:
Alignm length: 231
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 48

Conread position: 432-665
Cow position:
Alignm length: 235
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 214

Conread position: 444-663
Cow position:
Alignm length: 221
Alignm identity: 160
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 40, 21

Conread position: 450-664
Cow position:
Alignm length: 216
Alignm identity: 166
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 140, 196

Conread position: 538-665
Cow position:
Alignm length: 128
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 60, 0

Show alignments to all cow chromosomes.