Cow genome map

Conread name: Ova1-OVRM10078G07

Conread position: 1-351
Cow position:
Alignm length: 366
Alignm identity: 235
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 93

Conread position: 4-366
Cow position:
Alignm length: 368
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 67

Conread position: 4-409
Cow position:
Alignm length: 422
Alignm identity: 280
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 8, 78

Conread position: 5-357
Cow position:
Alignm length: 359
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 21

Conread position: 6-361
Cow position:
Alignm length: 358
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 70

Conread position: 7-357
Cow position:
Alignm length: 355
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 255

Conread position: 7-357
Cow position:
Alignm length: 359
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 7-357
Cow position:
Alignm length: 358
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 78

Conread position: 7-361
Cow position:
Alignm length: 361
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 67

Conread position: 7-361
Cow position:
Alignm length: 361
Alignm identity: 247
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 29, 98

Conread position: 7-381
Cow position:
Alignm length: 382
Alignm identity: 258
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 302, 31

Conread position: 7-406
Cow position:
Alignm length: 406
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 291

Conread position: 7-409
Cow position:
Alignm length: 407
Alignm identity: 269
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 29, 51

Conread position: 7-409
Cow position:
Alignm length: 410
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 7-646
Cow position:
Alignm length: 674
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 7-647
Cow position:
Alignm length: 678
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 69

Conread position: 7-648
Cow position:
Alignm length: 685
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 253

Conread position: 7-649
Cow position:
Alignm length: 684
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 72

Conread position: 7-651
Cow position:
Alignm length: 689
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 252

Conread position: 7-665
Cow position:
Alignm length: 699
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 284

Conread position: 7-665
Cow position:
Alignm length: 680
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 441

Conread position: 7-665
Cow position:
Alignm length: 701
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 252

Conread position: 8-276
Cow position:
Alignm length: 271
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 8-342
Cow position:
Alignm length: 341
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 69

Conread position: 8-357
Cow position:
Alignm length: 351
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 154

Conread position: 8-357
Cow position:
Alignm length: 357
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 254

Conread position: 8-357
Cow position:
Alignm length: 356
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 8-357
Cow position:
Alignm length: 356
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 102

Conread position: 8-357
Cow position:
Alignm length: 353
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 8-357
Cow position:
Alignm length: 353
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 8-357
Cow position:
Alignm length: 356
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 8-358
Cow position:
Alignm length: 359
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 204

Conread position: 8-364
Cow position:
Alignm length: 363
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 19

Conread position: 8-364
Cow position:
Alignm length: 365
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 19

Conread position: 8-367
Cow position:
Alignm length: 364
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 158

Conread position: 8-374
Cow position:
Alignm length: 375
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 352

Conread position: 8-565
Cow position:
Alignm length: 584
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 83

Conread position: 8-648
Cow position:
Alignm length: 662
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 84

Conread position: 8-665
Cow position:
Alignm length: 684
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 444

Conread position: 8-665
Cow position:
Alignm length: 689
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 668

Conread position: 9-350
Cow position:
Alignm length: 348
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 10-357
Cow position:
Alignm length: 354
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 11-366
Cow position:
Alignm length: 364
Alignm identity: 235
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 99

Conread position: 12-375
Cow position:
Alignm length: 370
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 184

Conread position: 14-456
Cow position:
Alignm length: 451
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 133

Conread position: 15-664
Cow position:
Alignm length: 675
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 195

Conread position: 18-361
Cow position:
Alignm length: 356
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 87

Conread position: 18-647
Cow position:
Alignm length: 641
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 71

Conread position: 26-372
Cow position:
Alignm length: 355
Alignm identity: 237
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 15, 48

Conread position: 32-357
Cow position:
Alignm length: 328
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 23

Conread position: 32-357
Cow position:
Alignm length: 331
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 53

Conread position: 32-357
Cow position:
Alignm length: 328
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 87

Conread position: 32-661
Cow position:
Alignm length: 663
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 58

Conread position: 36-349
Cow position:
Alignm length: 318
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 0

Conread position: 38-648
Cow position:
Alignm length: 636
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 41-245
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 15, 36

Conread position: 42-320
Cow position:
Alignm length: 279
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 46-374
Cow position:
Alignm length: 335
Alignm identity: 233
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 261, 152

Conread position: 46-374
Cow position:
Alignm length: 335
Alignm identity: 216
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 28, 56

Conread position: 48-317
Cow position:
Alignm length: 279
Alignm identity: 197
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 20, 52

Conread position: 49-374
Cow position:
Alignm length: 329
Alignm identity: 217
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 33, 25

Conread position: 49-538
Cow position:
Alignm length: 512
Alignm identity: 333
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 198, 70

Conread position: 49-603
Cow position:
Alignm length: 567
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 324

Conread position: 62-357
Cow position:
Alignm length: 304
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 97

Conread position: 62-357
Cow position:
Alignm length: 302
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 70-665
Cow position:
Alignm length: 629
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 34

Conread position: 76-374
Cow position:
Alignm length: 305
Alignm identity: 206
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 109, 56

Conread position: 77-367
Cow position:
Alignm length: 300
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 78-361
Cow position:
Alignm length: 290
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 19

Conread position: 78-366
Cow position:
Alignm length: 293
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 81

Conread position: 79-492
Cow position:
Alignm length: 429
Alignm identity: 276
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 20, 9

Conread position: 80-321
Cow position:
Alignm length: 249
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 80-374
Cow position:
Alignm length: 305
Alignm identity: 203
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 139

Conread position: 81-259
Cow position:
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 26, 80

Conread position: 81-337
Cow position:
Alignm length: 262
Alignm identity: 190
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 226, 149

Conread position: 88-361
Cow position:
Alignm length: 287
Alignm identity: 200
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 8, 181

Conread position: 89-361
Cow position:
Alignm length: 278
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 122

Conread position: 94-368
Cow position:
Alignm length: 279
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 157

Conread position: 98-361
Cow position:
Alignm length: 270
Alignm identity: 194
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 214, 120

Conread position: 102-367
Cow position:
Alignm length: 281
Alignm identity: 202
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 60, 105

Conread position: 102-409
Cow position:
Alignm length: 325
Alignm identity: 222
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 22, 7

Conread position: 102-665
Cow position:
Alignm length: 592
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 50

Conread position: 102-665
Cow position:
Alignm length: 591
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 132

Conread position: 103-321
Cow position:
Alignm length: 219
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 0

Conread position: 104-338
Cow position:
Alignm length: 239
Alignm identity: 162
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 30

Conread position: 106-665
Cow position:
Alignm length: 593
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 50

Conread position: 112-364
Cow position:
Alignm length: 255
Alignm identity: 164
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 200, 0

Conread position: 112-374
Cow position:
Alignm length: 266
Alignm identity: 182
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 200, 250

Conread position: 112-374
Cow position:
Alignm length: 270
Alignm identity: 185
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 113, 239

Conread position: 118-499
Cow position:
Alignm length: 409
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 334

Conread position: 121-361
Cow position:
Alignm length: 246
Alignm identity: 180
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 191, 96

Conread position: 123-350
Cow position:
Alignm length: 231
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 87

Conread position: 128-357
Cow position:
Alignm length: 236
Alignm identity: 180
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 35, 0

Conread position: 129-361
Cow position:
Alignm length: 238
Alignm identity: 175
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 183, 0

Conread position: 148-360
Cow position:
Alignm length: 220
Alignm identity: 156
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 71, 83

Conread position: 161-650
Cow position:
Alignm length: 512
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 56

Conread position: 185-374
Cow position:
Alignm length: 199
Alignm identity: 140
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 59, 183

Conread position: 217-609
Cow position:
Alignm length: 409
Alignm identity: 270
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 88, 151

Conread position: 249-366
Cow position:
Alignm length: 120
Alignm identity: 98
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 60, 66

Conread position: 309-665
Cow position:
Alignm length: 363
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 67

Conread position: 314-665
Cow position:
Alignm length: 364
Alignm identity: 250
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 108, 35

Conread position: 342-609
Cow position:
Alignm length: 277
Alignm identity: 198
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 25, 94

Conread position: 353-665
Cow position:
Alignm length: 327
Alignm identity: 229
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 68, 58

Conread position: 356-665
Cow position:
Alignm length: 316
Alignm identity: 226
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 65, 37

Conread position: 356-665
Cow position:
Alignm length: 317
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 78

Conread position: 356-665
Cow position:
Alignm length: 318
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 79

Conread position: 358-665
Cow position:
Alignm length: 322
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 76

Conread position: 358-665
Cow position:
Alignm length: 315
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 76

Conread position: 362-647
Cow position:
Alignm length: 293
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 72

Conread position: 362-648
Cow position:
Alignm length: 295
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 72

Conread position: 362-661
Cow position:
Alignm length: 308
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 64

Conread position: 362-665
Cow position:
Alignm length: 307
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 72

Conread position: 362-665
Cow position:
Alignm length: 312
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 72

Conread position: 362-665
Cow position:
Alignm length: 307
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 72

Conread position: 362-665
Cow position:
Alignm length: 311
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 71

Conread position: 362-665
Cow position:
Alignm length: 310
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 19

Conread position: 362-665
Cow position:
Alignm length: 312
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 72

Conread position: 362-665
Cow position:
Alignm length: 311
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 72

Conread position: 362-665
Cow position:
Alignm length: 312
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 73

Conread position: 362-665
Cow position:
Alignm length: 310
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 72

Conread position: 362-665
Cow position:
Alignm length: 312
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 72

Conread position: 363-541
Cow position:
Alignm length: 189
Alignm identity: 142
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 54, 69

Conread position: 363-647
Cow position:
Alignm length: 292
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 71

Conread position: 363-648
Cow position:
Alignm length: 293
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 71

Conread position: 363-648
Cow position:
Alignm length: 293
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 71

Conread position: 363-665
Cow position:
Alignm length: 310
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 71

Conread position: 363-665
Cow position:
Alignm length: 323
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 15

Conread position: 363-665
Cow position:
Alignm length: 309
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 72

Conread position: 363-665
Cow position:
Alignm length: 309
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 219

Conread position: 367-648
Cow position:
Alignm length: 289
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 67

Conread position: 382-665
Cow position:
Alignm length: 291
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 5

Conread position: 382-665
Cow position:
Alignm length: 305
Alignm identity: 218
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 39, 54

Conread position: 383-665
Cow position:
Alignm length: 290
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 51

Conread position: 388-665
Cow position:
Alignm length: 287
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 46

Conread position: 430-665
Cow position:
Alignm length: 237
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 216

Conread position: 436-665
Cow position:
Alignm length: 232
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 211

Conread position: 441-648
Cow position:
Alignm length: 212
Alignm identity: 164
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 23, 33

Conread position: 450-648
Cow position:
Alignm length: 200
Alignm identity: 158
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 479-665
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 166, 0

Conread position: 510-665
Cow position:
Alignm length: 156
Alignm identity: 126
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 131, 0

Conread position: 532-665
Cow position:
Alignm length: 135
Alignm identity: 108
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 11, 113

Conread position: 543-665
Cow position:
Alignm length: 123
Alignm identity: 98
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 99, 0

Show alignments to all cow chromosomes.