Cow genome map
| Conread name: | Ova1-OVRM10081B09 |
| Conread position: | 1-500 |
| Cow position: | chr1:18139518-18139043 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 16 |
| Conread position: | 1-518 |
| Cow position: | chr1:5548823-5548307 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 334 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 96, 75 |
| Conread position: | 1-531 |
| Cow position: | chr1:65923757-65923218 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 355 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 233, 26 |
| Conread position: | 1-655 |
| Cow position: | chr1:67292564-67293210 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 148 |
| Conread position: | 1-683 |
| Cow position: | chr1:32908754-32909440 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 56 |
| Conread position: | 1-683 |
| Cow position: | chr1:40643191-40643842 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 75 |
| Conread position: | 1-732 |
| Cow position: | chr1:79111422-79112129 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 175 |
| Conread position: | 1-735 |
| Cow position: | chr1:40512078-40511350 (view UCSC Genome Browser custom track) |
| Alignm length: | 748 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 43 |
| Conread position: | 2-735 |
| Cow position: | chr1:73198090-73197365 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 148 |
| Conread position: | 3-733 |
| Cow position: | chr1:99019074-99018358 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 543 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 134 |
| Conread position: | 5-517 |
| Cow position: | chr1:101861125-101860633 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 8-653 |
| Cow position: | chr1:70419439-70418804 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 57 |
| Conread position: | 64-740 |
| Cow position: | chr1:67326928-67326284 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 49 |
| Conread position: | 76-540 |
| Cow position: | chr1:16581494-16581055 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 7 |
| Conread position: | 76-540 |
| Cow position: | chr1:16587070-16586631 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 7 |
| Conread position: | 94-693 |
| Cow position: | chr1:72992547-72993117 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 48 |
| Conread position: | 135-735 |
| Cow position: | chr1:13581915-13581323 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 56 |
| Conread position: | 137-709 |
| Cow position: | chr1:81841400-81840845 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 12 |
| Conread position: | 173-735 |
| Cow position: | chr1:46836721-46837295 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 148 |
| Conread position: | 175-704 |
| Cow position: | chr1:40749127-40748608 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 77 |
| Conread position: | 183-735 |
| Cow position: | chr1:78923343-78923890 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 50 |
| Conread position: | 210-618 |
| Cow position: | chr1:41782167-41781764 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 293 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 18, 68 |
| Conread position: | 241-735 |
| Cow position: | chr1:85532189-85531687 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 37 |
| Conread position: | 244-732 |
| Cow position: | chr1:43984928-43984439 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 187 |
| Conread position: | 245-712 |
| Cow position: | chr1:81927463-81927024 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 306 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 259, 97 |
| Conread position: | 245-712 |
| Cow position: | chr1:91529468-91529010 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 294 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 34, 131 |
| Conread position: | 248-694 |
| Cow position: | chr1:74255360-74254892 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 307 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 71, 138 |
| Conread position: | 258-735 |
| Cow position: | chr1:51965466-51965946 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 77 |
| Conread position: | 278-611 |
| Cow position: | chr1:66486931-66487266 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 142, 26 |
| Conread position: | 309-726 |
| Cow position: | chr1:93235939-93236353 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 99 |
| Conread position: | 342-605 |
| Cow position: | chr1:82929139-82928876 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 65, 100 |
| Conread position: | 375-552 |
| Cow position: | chr1:29607970-29607793 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 93, 38 |
| Conread position: | 397-712 |
| Cow position: | chr1:76095730-76095419 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 159, 13 |
| Conread position: | 400-694 |
| Cow position: | chr1:92668098-92667799 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 154, 14 |
| Conread position: | 416-681 |
| Cow position: | chr1:33581143-33580877 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 20, 150 |
| Conread position: | 429-735 |
| Cow position: | chr1:57746033-57745725 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 93, 75 |
| Conread position: | 434-735 |
| Cow position: | chr1:77115300-77114992 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 149, 86 |
| Conread position: | 441-610 |
| Cow position: | chr1:84152280-84152451 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 120, 61 |
Show alignments to all cow chromosomes.