Cow genome map
| Conread name: | Ova1-OVRM10088F08 |
| Conread position: | 4-463 |
| Cow position: | chr1:34684801-34685249 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 309 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 92, 41 |
| Conread position: | 4-585 |
| Cow position: | chr1:19145854-19145288 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 55 |
| Conread position: | 4-591 |
| Cow position: | chr1:22253389-22253969 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 12 |
| Conread position: | 5-590 |
| Cow position: | chr1:99572250-99571689 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 110 |
| Conread position: | 5-591 |
| Cow position: | chr1:71135216-71135811 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 84 |
| Conread position: | 13-314 |
| Cow position: | chr1:31391970-31391667 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 55, 26 |
| Conread position: | 15-591 |
| Cow position: | chr1:20001673-20001101 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 34 |
| Conread position: | 16-352 |
| Cow position: | chr1:21132548-21132189 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 240 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 55, 342 |
| Conread position: | 16-496 |
| Cow position: | chr1:13438446-13438914 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 69 |
| Conread position: | 23-473 |
| Cow position: | chr1:31515780-31515353 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 303 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 45, 66 |
| Conread position: | 23-547 |
| Cow position: | chr1:30531689-30531165 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 92 |
| Conread position: | 23-567 |
| Cow position: | chr1:72086933-72087473 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 93 |
| Conread position: | 23-587 |
| Cow position: | chr1:102552337-102552875 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 66 |
| Conread position: | 24-248 |
| Cow position: | chr1:90605541-90605312 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 24-550 |
| Cow position: | chr1:83136277-83136806 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 60 |
| Conread position: | 25-391 |
| Cow position: | chr1:71667146-71666758 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 280 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 9, 92 |
| Conread position: | 26-500 |
| Cow position: | chr1:18024484-18024004 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 205 |
| Conread position: | 29-585 |
| Cow position: | chr1:40088715-40089267 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 81 |
| Conread position: | 55-595 |
| Cow position: | chr1:76700378-76699826 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 200 |
| Conread position: | 93-554 |
| Cow position: | chr1:44229605-44230100 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 310 |
| Conread position: | 99-586 |
| Cow position: | chr1:42888099-42887604 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 303 |
| Conread position: | 101-311 |
| Cow position: | chr1:22288398-22288610 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 102-502 |
| Cow position: | chr1:57396920-57396517 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 22 |
| Conread position: | 102-560 |
| Cow position: | chr1:56232046-56232520 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 315 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 51, 76 |
| Conread position: | 102-567 |
| Cow position: | chr1:88297619-88298098 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 290 |
| Conread position: | 102-568 |
| Cow position: | chr1:30786127-30785654 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 80 |
| Conread position: | 103-567 |
| Cow position: | chr1:76304239-76303776 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 320 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 71, 50 |
| Conread position: | 105-515 |
| Cow position: | chr1:16573521-16573108 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 18 |
| Conread position: | 107-550 |
| Cow position: | chr1:7196758-7197212 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 36 |
| Conread position: | 109-496 |
| Cow position: | chr1:21103180-21102802 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 18, 34 |
| Conread position: | 119-583 |
| Cow position: | chr1:31039647-31039191 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 313 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 14, 24 |
| Conread position: | 120-590 |
| Cow position: | chr1:101833810-101834278 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 263 |
| Conread position: | 124-480 |
| Cow position: | chr1:72036021-72035648 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 252 |
| Conread position: | 125-557 |
| Cow position: | chr1:68854373-68854810 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 230 |
| Conread position: | 164-590 |
| Cow position: | chr1:92433243-92433666 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 269 |
| Conread position: | 176-567 |
| Cow position: | chr1:57391134-57390734 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 260 |
| Conread position: | 218-589 |
| Cow position: | chr1:82958762-82958411 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 259 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 92, 224 |
Show alignments to all cow chromosomes.