Cow genome map
| Conread name: | Ova1-OVRM10088F08 |
| Conread position: | 4-232 |
| Cow position: | chr3:15988132-15988346 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 64, 85 |
| Conread position: | 4-246 |
| Cow position: | chr3:3885006-3884766 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 39, 118 |
| Conread position: | 4-246 |
| Cow position: | chr3:56102932-56103164 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 64, 85 |
| Conread position: | 4-517 |
| Cow position: | chr3:15663251-15662750 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 40 |
| Conread position: | 4-559 |
| Cow position: | chr3:58766336-58766886 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 78 |
| Conread position: | 4-594 |
| Cow position: | chr3:77550151-77550740 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 46 |
| Conread position: | 5-244 |
| Cow position: | chr3:33326580-33326806 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 66, 110 |
| Conread position: | 5-588 |
| Cow position: | chr3:34087005-34086445 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 57 |
| Conread position: | 16-483 |
| Cow position: | chr3:23287132-23286669 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 81 |
| Conread position: | 16-522 |
| Cow position: | chr3:3300847-3301346 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 41 |
| Conread position: | 23-360 |
| Cow position: | chr3:6854415-6854042 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 45, 112 |
| Conread position: | 23-547 |
| Cow position: | chr3:45184775-45184261 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 93 |
| Conread position: | 23-547 |
| Cow position: | chr3:48603464-48604002 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 93 |
| Conread position: | 23-547 |
| Cow position: | chr3:76136530-76137073 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 96 |
| Conread position: | 29-550 |
| Cow position: | chr3:28765194-28764673 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 56 |
| Conread position: | 30-246 |
| Cow position: | chr3:19794873-19794672 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 41, 59 |
| Conread position: | 45-239 |
| Cow position: | chr3:16005576-16005385 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 23, 65 |
| Conread position: | 45-246 |
| Cow position: | chr3:60891491-60891688 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 71 |
| Conread position: | 100-591 |
| Cow position: | chr3:24275846-24276340 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 44 |
| Conread position: | 102-581 |
| Cow position: | chr3:9639737-9639255 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 185 |
| Conread position: | 102-590 |
| Cow position: | chr3:27531504-27531020 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 312 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 209, 122 |
| Conread position: | 102-591 |
| Cow position: | chr3:75158072-75157575 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 354 |
| Conread position: | 103-591 |
| Cow position: | chr3:49133123-49132633 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 43 |
| Conread position: | 107-591 |
| Cow position: | chr3:76187820-76188313 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 170 |
| Conread position: | 108-591 |
| Cow position: | chr3:21026126-21025632 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 38 |
| Conread position: | 114-567 |
| Cow position: | chr3:64171528-64172003 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 273 |
| Conread position: | 119-517 |
| Cow position: | chr3:25056975-25057380 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 34 |
| Conread position: | 120-499 |
| Cow position: | chr3:17059173-17058792 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 243 |
| Conread position: | 135-499 |
| Cow position: | chr3:45691741-45691360 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 259 |
| Conread position: | 140-483 |
| Cow position: | chr3:39857013-39857364 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 246 |
| Conread position: | 140-588 |
| Cow position: | chr3:45215474-45215021 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 256 |
| Conread position: | 149-551 |
| Cow position: | chr3:62246883-62246466 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 19 |
| Conread position: | 162-392 |
| Cow position: | chr3:77272173-77271952 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 148, 58 |
Show alignments to all cow chromosomes.