Cow genome map
| Conread name: | Ova1-OVRM10088F08 |
| Conread position: | 4-587 |
| Cow position: | chr4:962592-962022 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 84 |
| Conread position: | 4-589 |
| Cow position: | chr4:1028235-1027638 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 85 |
| Conread position: | 4-591 |
| Cow position: | chr4:22904679-22905272 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 115 |
| Conread position: | 4-591 |
| Cow position: | chr4:27292890-27292328 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 58 |
| Conread position: | 5-246 |
| Cow position: | chr4:12840938-12841173 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 57, 113 |
| Conread position: | 5-551 |
| Cow position: | chr4:14142306-14142870 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 152 |
| Conread position: | 5-589 |
| Cow position: | chr4:36754784-36755353 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 85 |
| Conread position: | 5-591 |
| Cow position: | chr4:39457659-39458258 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 45 |
| Conread position: | 7-566 |
| Cow position: | chr4:22316726-22317311 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 213 |
| Conread position: | 10-348 |
| Cow position: | chr4:35868198-35868551 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 58, 133 |
| Conread position: | 16-483 |
| Cow position: | chr4:67383291-67383756 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 34 |
| Conread position: | 16-552 |
| Cow position: | chr4:54170432-54170969 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 96 |
| Conread position: | 23-380 |
| Cow position: | chr4:23304324-23303971 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 264 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 45, 93 |
| Conread position: | 28-591 |
| Cow position: | chr4:61651544-61650963 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 87 |
| Conread position: | 29-368 |
| Cow position: | chr4:31588005-31587665 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 46, 88 |
| Conread position: | 30-587 |
| Cow position: | chr4:46526098-46526628 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 59 |
| Conread position: | 87-589 |
| Cow position: | chr4:1436589-1436085 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 35 |
| Conread position: | 88-591 |
| Cow position: | chr4:68362056-68362572 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 105 |
| Conread position: | 89-249 |
| Cow position: | chr4:66548981-66548821 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 40, 134 |
| Conread position: | 102-354 |
| Cow position: | chr4:62000369-62000104 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 102-360 |
| Cow position: | chr4:25352502-25352234 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 42 |
| Conread position: | 102-364 |
| Cow position: | chr4:9712806-9713083 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 109, 42 |
| Conread position: | 102-585 |
| Cow position: | chr4:39645834-39646326 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 41 |
| Conread position: | 102-589 |
| Cow position: | chr4:6034945-6034461 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 51 |
| Conread position: | 102-589 |
| Cow position: | chr4:11872767-11872282 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 27 |
| Conread position: | 102-591 |
| Cow position: | chr4:21056319-21056820 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 65 |
| Conread position: | 103-583 |
| Cow position: | chr4:43761741-43762215 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 122 |
| Conread position: | 112-559 |
| Cow position: | chr4:41602013-41602470 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 17 |
| Conread position: | 112-591 |
| Cow position: | chr4:48153218-48152738 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 281 |
| Conread position: | 119-547 |
| Cow position: | chr4:64039303-64039711 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 292 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 7, 168 |
| Conread position: | 126-591 |
| Cow position: | chr4:67407659-67408125 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 133 |
| Conread position: | 149-477 |
| Cow position: | chr4:67757171-67757498 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 89, 105 |
| Conread position: | 153-591 |
| Cow position: | chr4:45499304-45499735 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 233 |
| Conread position: | 173-591 |
| Cow position: | chr4:30004839-30004420 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 211 |
Show alignments to all cow chromosomes.