Cow genome map
| Conread name: | Ova1-OVRM10088F08 |
| Conread position: | 4-499 |
| Cow position: | chrX:1617160-1616658 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 85 |
| Conread position: | 4-583 |
| Cow position: | chrX:2185298-2185892 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 153 |
| Conread position: | 5-245 |
| Cow position: | chrX:41734110-41733887 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 136, 57 |
| Conread position: | 5-248 |
| Cow position: | chrX:150547-150775 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 63, 85 |
| Conread position: | 5-340 |
| Cow position: | chrX:22819153-22819477 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 8, 20 |
| Conread position: | 6-594 |
| Cow position: | chrX:40268557-40269145 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 113 |
| Conread position: | 9-246 |
| Cow position: | chrX:19929513-19929740 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 59, 74 |
| Conread position: | 16-399 |
| Cow position: | chrX:24280006-24280381 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 51, 75 |
| Conread position: | 16-550 |
| Cow position: | chrX:671907-671378 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 75 |
| Conread position: | 20-246 |
| Cow position: | chrX:37363801-37364028 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 48, 92 |
| Conread position: | 23-547 |
| Cow position: | chrX:27095223-27095747 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 16 |
| Conread position: | 26-528 |
| Cow position: | chrX:34221861-34222361 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 65 |
| Conread position: | 26-541 |
| Cow position: | chrX:45400924-45400418 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 57 |
| Conread position: | 26-547 |
| Cow position: | chrX:18455675-18455154 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 64 |
| Conread position: | 28-587 |
| Cow position: | chrX:41879831-41879268 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 86 |
| Conread position: | 30-483 |
| Cow position: | chrX:42222673-42222224 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 59 |
| Conread position: | 41-518 |
| Cow position: | chrX:28879482-28879007 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 74 |
| Conread position: | 89-569 |
| Cow position: | chrX:6194174-6193675 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 333 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 70, 91 |
| Conread position: | 102-246 |
| Cow position: | chrX:36839864-36840008 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 102-402 |
| Cow position: | chrX:17889702-17889394 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 147, 110 |
| Conread position: | 109-361 |
| Cow position: | chrX:18987616-18987881 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 115-589 |
| Cow position: | chrX:36794177-36794658 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 41 |
| Conread position: | 116-567 |
| Cow position: | chrX:27450877-27450399 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 286 |
| Conread position: | 149-591 |
| Cow position: | chrX:11073994-11073539 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 139 |
| Conread position: | 173-528 |
| Cow position: | chrX:19127987-19127640 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 252 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 137, 83 |
| Conread position: | 596-710 |
| Cow position: | chrX:41891325-41891210 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 68, 57 |
Show alignments to all cow chromosomes.