Cow genome map

Conread name: Ova1-OVRM10092F12

Conread position: 84-432
Cow position:
Alignm length: 354
Alignm identity: 230
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 134, 41

Conread position: 128-419
Cow position:
Alignm length: 310
Alignm identity: 210
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 236

Conread position: 134-445
Cow position:
Alignm length: 323
Alignm identity: 222
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 35

Conread position: 135-578
Cow position:
Alignm length: 459
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 52

Conread position: 139-422
Cow position:
Alignm length: 291
Alignm identity: 203
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 29, 43

Conread position: 163-415
Cow position:
Alignm length: 255
Alignm identity: 177
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 194, 47

Conread position: 170-719
Cow position:
Alignm length: 562
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 12

Conread position: 174-693
Cow position:
Alignm length: 559
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 90

Conread position: 181-479
Cow position:
Alignm length: 311
Alignm identity: 214
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 35, 100

Conread position: 187-455
Cow position:
Alignm length: 276
Alignm identity: 197
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 25, 85

Conread position: 194-412
Cow position:
Alignm length: 228
Alignm identity: 172
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 18, 150

Conread position: 194-453
Cow position:
Alignm length: 262
Alignm identity: 186
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 12, 76

Conread position: 194-454
Cow position:
Alignm length: 266
Alignm identity: 182
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 12, 32

Conread position: 194-468
Cow position:
Alignm length: 279
Alignm identity: 186
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 143, 73

Conread position: 194-469
Cow position:
Alignm length: 277
Alignm identity: 187
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 163, 81

Conread position: 194-490
Cow position:
Alignm length: 303
Alignm identity: 201
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 146, 72

Conread position: 194-557
Cow position:
Alignm length: 373
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 40

Conread position: 194-710
Cow position:
Alignm length: 518
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 93

Conread position: 197-424
Cow position:
Alignm length: 231
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 170, 78

Conread position: 198-448
Cow position:
Alignm length: 254
Alignm identity: 183
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 13, 76

Conread position: 198-449
Cow position:
Alignm length: 255
Alignm identity: 184
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 13, 98

Conread position: 198-453
Cow position:
Alignm length: 257
Alignm identity: 191
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 8, 52

Conread position: 198-589
Cow position:
Alignm length: 403
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 73

Conread position: 199-426
Cow position:
Alignm length: 228
Alignm identity: 151
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 199-717
Cow position:
Alignm length: 528
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 76

Conread position: 199-719
Cow position:
Alignm length: 525
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 61

Conread position: 201-332
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 201-403
Cow position:
Alignm length: 204
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 156, 77

Conread position: 201-432
Cow position:
Alignm length: 233
Alignm identity: 177
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 217, 85

Conread position: 201-446
Cow position:
Alignm length: 250
Alignm identity: 174
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 169, 10

Conread position: 201-455
Cow position:
Alignm length: 257
Alignm identity: 174
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 15, 66

Conread position: 201-546
Cow position:
Alignm length: 348
Alignm identity: 240
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 156, 83

Conread position: 201-689
Cow position:
Alignm length: 495
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 125

Conread position: 201-700
Cow position:
Alignm length: 507
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 78

Conread position: 201-700
Cow position:
Alignm length: 506
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 63

Conread position: 201-719
Cow position:
Alignm length: 522
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 71

Conread position: 201-719
Cow position:
Alignm length: 530
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 10

Conread position: 201-719
Cow position:
Alignm length: 526
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 25

Conread position: 202-480
Cow position:
Alignm length: 284
Alignm identity: 197
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 146, 70

Conread position: 202-716
Cow position:
Alignm length: 524
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 70

Conread position: 203-369
Cow position:
Alignm length: 175
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 62

Conread position: 203-419
Cow position:
Alignm length: 221
Alignm identity: 171
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 9, 60

Conread position: 203-454
Cow position:
Alignm length: 260
Alignm identity: 179
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 146, 69

Conread position: 203-530
Cow position:
Alignm length: 334
Alignm identity: 240
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 24, 66

Conread position: 203-715
Cow position:
Alignm length: 519
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 61

Conread position: 203-719
Cow position:
Alignm length: 531
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 72

Conread position: 204-339
Cow position:
Alignm length: 136
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 204-349
Cow position:
Alignm length: 146
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 204-349
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 204-365
Cow position:
Alignm length: 167
Alignm identity: 130
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 146, 7

Conread position: 204-394
Cow position:
Alignm length: 197
Alignm identity: 139
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 150, 13

Conread position: 204-422
Cow position:
Alignm length: 223
Alignm identity: 167
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 144, 13

Conread position: 204-432
Cow position:
Alignm length: 232
Alignm identity: 166
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 163, 13

Conread position: 204-453
Cow position:
Alignm length: 252
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 69

Conread position: 204-454
Cow position:
Alignm length: 254
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 13

Conread position: 204-540
Cow position:
Alignm length: 347
Alignm identity: 240
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 160, 47

Conread position: 204-719
Cow position:
Alignm length: 523
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 14

Conread position: 205-345
Cow position:
Alignm length: 141
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 205-347
Cow position:
Alignm length: 145
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 11, 68

Conread position: 205-400
Cow position:
Alignm length: 197
Alignm identity: 139
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 7, 21

Conread position: 205-422
Cow position:
Alignm length: 225
Alignm identity: 159
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 130, 70

Conread position: 205-613
Cow position:
Alignm length: 413
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 6

Conread position: 205-622
Cow position:
Alignm length: 423
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 94

Conread position: 205-716
Cow position:
Alignm length: 521
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 13

Conread position: 205-719
Cow position:
Alignm length: 548
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 137

Conread position: 205-719
Cow position:
Alignm length: 525
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 48

Conread position: 207-385
Cow position:
Alignm length: 180
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 150, 72

Conread position: 207-557
Cow position:
Alignm length: 354
Alignm identity: 247
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 86, 16

Conread position: 207-719
Cow position:
Alignm length: 520
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 64

Conread position: 208-719
Cow position:
Alignm length: 514
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 346, 67

Conread position: 209-441
Cow position:
Alignm length: 236
Alignm identity: 162
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 14, 61

Conread position: 209-580
Cow position:
Alignm length: 379
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 58

Conread position: 209-689
Cow position:
Alignm length: 487
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 104

Conread position: 211-453
Cow position:
Alignm length: 244
Alignm identity: 181
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 146, 60

Conread position: 211-454
Cow position:
Alignm length: 245
Alignm identity: 182
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 146, 62

Conread position: 211-461
Cow position:
Alignm length: 252
Alignm identity: 172
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 143, 58

Conread position: 211-534
Cow position:
Alignm length: 346
Alignm identity: 243
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 133, 51

Conread position: 211-629
Cow position:
Alignm length: 424
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 54

Conread position: 211-658
Cow position:
Alignm length: 453
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 64

Conread position: 212-645
Cow position:
Alignm length: 441
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 12

Conread position: 212-718
Cow position:
Alignm length: 517
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 59

Conread position: 213-332
Cow position:
Alignm length: 120
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 213-419
Cow position:
Alignm length: 207
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 213-444
Cow position:
Alignm length: 238
Alignm identity: 180
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 13, 61

Conread position: 213-446
Cow position:
Alignm length: 241
Alignm identity: 178
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 64, 0

Conread position: 213-453
Cow position:
Alignm length: 263
Alignm identity: 189
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 50, 175

Conread position: 213-453
Cow position:
Alignm length: 249
Alignm identity: 187
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 88, 57

Conread position: 213-529
Cow position:
Alignm length: 323
Alignm identity: 230
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 89, 66

Conread position: 213-530
Cow position:
Alignm length: 330
Alignm identity: 230
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 144, 56

Conread position: 214-389
Cow position:
Alignm length: 181
Alignm identity: 140
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 122, 57

Conread position: 214-422
Cow position:
Alignm length: 210
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 143, 24

Conread position: 214-454
Cow position:
Alignm length: 243
Alignm identity: 186
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 143, 46

Conread position: 215-666
Cow position:
Alignm length: 461
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 57

Conread position: 216-700
Cow position:
Alignm length: 491
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 43

Conread position: 216-719
Cow position:
Alignm length: 515
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 37

Conread position: 217-405
Cow position:
Alignm length: 192
Alignm identity: 149
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 84, 54

Conread position: 217-439
Cow position:
Alignm length: 232
Alignm identity: 183
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 46, 82

Conread position: 217-441
Cow position:
Alignm length: 226
Alignm identity: 158
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 197, 58

Conread position: 217-453
Cow position:
Alignm length: 241
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 69

Conread position: 217-454
Cow position:
Alignm length: 246
Alignm identity: 183
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 53, 91

Conread position: 217-454
Cow position:
Alignm length: 240
Alignm identity: 172
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 52, 63

Conread position: 217-519
Cow position:
Alignm length: 309
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 8

Conread position: 217-606
Cow position:
Alignm length: 400
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 54

Conread position: 217-718
Cow position:
Alignm length: 508
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 45

Conread position: 217-719
Cow position:
Alignm length: 508
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 72

Conread position: 217-719
Cow position:
Alignm length: 515
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 55

Conread position: 218-370
Cow position:
Alignm length: 158
Alignm identity: 122
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 131, 10

Conread position: 218-435
Cow position:
Alignm length: 220
Alignm identity: 155
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 120, 57

Conread position: 218-467
Cow position:
Alignm length: 258
Alignm identity: 193
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 83, 29

Conread position: 218-484
Cow position:
Alignm length: 271
Alignm identity: 187
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 139, 57

Conread position: 218-505
Cow position:
Alignm length: 297
Alignm identity: 207
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 139, 51

Conread position: 218-648
Cow position:
Alignm length: 435
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 77

Conread position: 218-719
Cow position:
Alignm length: 507
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 57

Conread position: 219-453
Cow position:
Alignm length: 237
Alignm identity: 178
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 138, 52

Conread position: 219-718
Cow position:
Alignm length: 508
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 48

Conread position: 219-719
Cow position:
Alignm length: 506
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 40

Conread position: 220-618
Cow position:
Alignm length: 430
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 44

Conread position: 220-694
Cow position:
Alignm length: 476
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 333, 55

Conread position: 220-719
Cow position:
Alignm length: 505
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 55

Conread position: 220-719
Cow position:
Alignm length: 511
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 55

Conread position: 221-719
Cow position:
Alignm length: 509
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 54

Conread position: 224-719
Cow position:
Alignm length: 530
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 48

Conread position: 225-640
Cow position:
Alignm length: 418
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 44

Conread position: 226-578
Cow position:
Alignm length: 370
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 45

Conread position: 226-608
Cow position:
Alignm length: 388
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 53

Conread position: 230-494
Cow position:
Alignm length: 267
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 40

Conread position: 230-719
Cow position:
Alignm length: 494
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 86

Conread position: 231-460
Cow position:
Alignm length: 235
Alignm identity: 164
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 119, 36

Conread position: 238-451
Cow position:
Alignm length: 217
Alignm identity: 156
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 97, 57

Conread position: 245-479
Cow position:
Alignm length: 241
Alignm identity: 173
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 9, 53

Conread position: 268-435
Cow position:
Alignm length: 173
Alignm identity: 134
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 80, 59

Conread position: 268-476
Cow position:
Alignm length: 212
Alignm identity: 156
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 89, 0

Conread position: 268-510
Cow position:
Alignm length: 243
Alignm identity: 172
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 67, 0

Conread position: 268-520
Cow position:
Alignm length: 255
Alignm identity: 181
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 66, 221

Conread position: 268-546
Cow position:
Alignm length: 281
Alignm identity: 194
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 89, 98

Conread position: 268-588
Cow position:
Alignm length: 326
Alignm identity: 226
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 80, 198

Conread position: 276-442
Cow position:
Alignm length: 168
Alignm identity: 137
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 95, 80

Show alignments to all cow chromosomes.