Cow genome map

Conread name: Ova1-OVRM10092F12

Conread position: 135-486
Cow position: chr18:51412395-51412042 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 256
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 35, 144

Conread position: 135-715
Cow position: chr18:55696973-55697590 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 88

Conread position: 141-627
Cow position: chr18:50993230-50993746 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 77

Conread position: 150-719
Cow position: chr18:51712698-51713279 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 140

Conread position: 173-437
Cow position: chr18:21203267-21203542 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 197
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 45, 0

Conread position: 190-711
Cow position: chr18:22065393-22065922 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 28

Conread position: 194-453
Cow position: chr18:33157772-33157522 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 163, 77

Conread position: 194-509
Cow position: chr18:56159415-56159104 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 228
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 263, 23

Conread position: 194-719
Cow position: chr18:37023597-37024121 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 15

Conread position: 195-451
Cow position: chr18:5578261-5578007 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 171
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 153, 70

Conread position: 198-431
Cow position: chr18:32773828-32773602 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 135, 70

Conread position: 198-453
Cow position: chr18:25970682-25970931 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 13, 60

Conread position: 199-449
Cow position: chr18:55789044-55789287 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 172
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 139, 12

Conread position: 199-470
Cow position: chr18:4381242-4380979 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 193
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 7, 20

Conread position: 200-510
Cow position: chr18:35797574-35797265 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 70

Conread position: 201-464
Cow position: chr18:43823002-43823263 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 101, 18

Conread position: 201-719
Cow position: chr18:40759155-40758649 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 66

Conread position: 203-368
Cow position: chr18:41072952-41072792 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 20, 62

Conread position: 203-447
Cow position: chr18:23652675-23652906 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 185
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 9, 66

Conread position: 203-449
Cow position: chr18:26334864-26335112 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 189
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 11, 60

Conread position: 203-454
Cow position: chr18:23424866-23424628 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 187
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 227, 68

Conread position: 203-489
Cow position: chr18:10508228-10508495 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 204
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 211, 68

Conread position: 203-717
Cow position: chr18:601236-601731 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 34

Conread position: 204-451
Cow position: chr18:11166926-11166682 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 184
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 35, 26

Conread position: 204-451
Cow position: chr18:23807928-23808170 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 185
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 153, 13

Conread position: 204-460
Cow position: chr18:50566817-50566567 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 195
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 144, 13

Conread position: 204-530
Cow position: chr18:20174183-20174506 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 71

Conread position: 204-557
Cow position: chr18:23766469-23766824 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 241
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 163, 6

Conread position: 204-719
Cow position: chr18:33299845-33299344 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 20

Conread position: 204-719
Cow position: chr18:33407562-33407075 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 72

Conread position: 204-719
Cow position: chr18:56150704-56151217 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 68

Conread position: 205-380
Cow position: chr18:36123484-36123307 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 126, 67

Conread position: 205-413
Cow position: chr18:19363880-19363674 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 170
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 96, 66

Conread position: 205-539
Cow position: chr18:17938673-17938331 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 235
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 58, 255

Conread position: 205-557
Cow position: chr18:38607168-38606832 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 247
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 348, 67

Conread position: 205-719
Cow position: chr18:44262571-44262052 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 81

Conread position: 207-539
Cow position: chr18:5571101-5570775 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 68

Conread position: 207-546
Cow position: chr18:29796482-29796825 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 242
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 150, 62

Conread position: 207-619
Cow position: chr18:22120935-22121343 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 65

Conread position: 208-436
Cow position: chr18:17669860-17670084 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 144, 80

Conread position: 208-719
Cow position: chr18:43564172-43563660 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 28

Conread position: 209-718
Cow position: chr18:11367820-11368345 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 8

Conread position: 209-718
Cow position: chr18:50082309-50082794 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 56

Conread position: 209-719
Cow position: chr18:20641548-20642041 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 80

Conread position: 210-453
Cow position: chr18:25647312-25647548 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 144, 59

Conread position: 211-435
Cow position: chr18:11691466-11691691 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 12, 61

Conread position: 211-453
Cow position: chr18:29224622-29224379 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 58, 76

Conread position: 211-657
Cow position: chr18:18919018-18919439 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 64

Conread position: 211-717
Cow position: chr18:17334473-17334961 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 56

Conread position: 211-719
Cow position: chr18:13507800-13508303 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 58

Conread position: 211-719
Cow position: chr18:29356688-29357207 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 58

Conread position: 211-719
Cow position: chr18:51500138-51500653 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 19

Conread position: 212-353
Cow position: chr18:21930396-21930534 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 11, 119

Conread position: 212-442
Cow position: chr18:25282613-25282843 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 157
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 145, 16

Conread position: 212-445
Cow position: chr18:50382193-50381966 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 145, 71

Conread position: 212-455
Cow position: chr18:39875321-39875561 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 145, 57

Conread position: 212-523
Cow position: chr18:21574932-21574630 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 210
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 145, 53

Conread position: 212-577
Cow position: chr18:9010659-9010309 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 25

Conread position: 212-693
Cow position: chr18:37335044-37334576 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 69

Conread position: 213-351
Cow position: chr18:35749044-35749173 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 213-391
Cow position: chr18:44493532-44493708 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 63, 121

Conread position: 213-432
Cow position: chr18:34325016-34325236 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 179
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 84, 58

Conread position: 213-444
Cow position: chr18:31562457-31562680 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 177
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 10, 59

Conread position: 213-445
Cow position: chr18:19387513-19387289 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 178
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 141, 54

Conread position: 213-454
Cow position: chr18:10101427-10101192 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 188
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 106, 39

Conread position: 213-470
Cow position: chr18:6275756-6275500 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 189
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 135, 66

Conread position: 213-494
Cow position: chr18:51298416-51298140 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 75

Conread position: 213-539
Cow position: chr18:55461772-55462094 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 17

Conread position: 214-454
Cow position: chr18:21176123-21175880 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 186
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 136, 76

Conread position: 214-656
Cow position: chr18:25002944-25003383 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 57

Conread position: 215-453
Cow position: chr18:36478134-36477899 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 180
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 139, 80

Conread position: 217-415
Cow position: chr18:23360567-23360368 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 75, 54

Conread position: 217-429
Cow position: chr18:9806350-9806135 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 170
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 85, 55

Conread position: 217-441
Cow position: chr18:19487046-19486826 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 140, 54

Conread position: 217-455
Cow position: chr18:51587611-51587840 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 101, 51

Conread position: 217-637
Cow position: chr18:56167986-56168398 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 279
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 107, 47

Conread position: 217-645
Cow position: chr18:16842130-16842561 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 54

Conread position: 217-649
Cow position: chr18:28101564-28101133 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 7

Conread position: 217-719
Cow position: chr18:7649930-7649430 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 45

Conread position: 218-404
Cow position: chr18:21205294-21205116 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 82, 54

Conread position: 218-619
Cow position: chr18:5189756-5190142 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 57

Conread position: 218-628
Cow position: chr18:35636416-35636819 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 66

Conread position: 218-642
Cow position: chr18:35076317-35075909 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 42

Conread position: 220-717
Cow position: chr18:17324646-17324160 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 55

Conread position: 221-719
Cow position: chr18:21939290-21938781 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 202

Conread position: 222-538
Cow position: chr18:5647175-5646858 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 232
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 132, 6

Conread position: 224-557
Cow position: chr18:45961343-45961663 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 329, 36

Conread position: 225-623
Cow position: chr18:6290711-6290312 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 11

Conread position: 225-686
Cow position: chr18:47314364-47314839 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 319
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 107, 50

Conread position: 225-719
Cow position: chr18:51691539-51692038 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 47

Conread position: 227-453
Cow position: chr18:11680647-11680421 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 127, 32

Conread position: 230-454
Cow position: chr18:329358-329573 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 127, 41

Conread position: 230-719
Cow position: chr18:22874794-22874302 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 31

Conread position: 235-626
Cow position: chr18:49161528-49161926 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 40

Conread position: 239-454
Cow position: chr18:50700582-50700365 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 32

Conread position: 258-412
Cow position: chr18:45720402-45720245 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 92, 9

Conread position: 263-453
Cow position: chr18:3422612-3422421 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 94, 71

Conread position: 263-454
Cow position: chr18:25206298-25206492 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 88, 0

Conread position: 263-647
Cow position: chr18:9712943-9712553 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 89

Conread position: 268-425
Cow position: chr18:48453581-48453422 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 268-502
Cow position: chr18:11811863-11811629 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 88, 72

Conread position: 268-595
Cow position: chr18:11618365-11618043 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 218
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 98, 137

Conread position: 268-611
Cow position: chr18:7487145-7486797 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 299

Conread position: 268-719
Cow position: chr18:11867227-11866786 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 64

Show alignments to all cow chromosomes.