Cow genome map


           Conread name:
           Ova1-OVRM10092F12
        

               Conread position:
               135-486
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               35, 144
               

               Conread position:
               135-715
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 88
               

               Conread position:
               141-627
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 77
               

               Conread position:
               150-719
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 140
               

               Conread position:
               173-437
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               190-711
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 28
               

               Conread position:
               194-453
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               163, 77
               

               Conread position:
               194-509
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               228
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               263, 23
               

               Conread position:
               194-719
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 15
               

               Conread position:
               195-451
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               153, 70
               

               Conread position:
               198-431
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               135, 70
               

               Conread position:
               198-453
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               13, 60
               

               Conread position:
               199-449
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               139, 12
               

               Conread position:
               199-470
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               7, 20
               

               Conread position:
               200-510
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 70
               

               Conread position:
               201-464
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               101, 18
               

               Conread position:
               201-719
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 66
               

               Conread position:
               203-368
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               20, 62
               

               Conread position:
               203-447
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               9, 66
               

               Conread position:
               203-449
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               11, 60
               

               Conread position:
               203-454
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               227, 68
               

               Conread position:
               203-489
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               211, 68
               

               Conread position:
               203-717
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 34
               

               Conread position:
               204-451
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               35, 26
               

               Conread position:
               204-451
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               185
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               153, 13
               

               Conread position:
               204-460
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               195
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               144, 13
               

               Conread position:
               204-530
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 71
               

               Conread position:
               204-557
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               163, 6
               

               Conread position:
               204-719
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 20
               

               Conread position:
               204-719
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 72
               

               Conread position:
               204-719
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 68
               

               Conread position:
               205-380
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               126, 67
               

               Conread position:
               205-413
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               170
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               96, 66
               

               Conread position:
               205-539
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               58, 255
               

               Conread position:
               205-557
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               247
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               348, 67
               

               Conread position:
               205-719
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 81
               

               Conread position:
               207-539
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 68
               

               Conread position:
               207-546
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               242
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               150, 62
               

               Conread position:
               207-619
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 65
               

               Conread position:
               208-436
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               144, 80
               

               Conread position:
               208-719
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 28
               

               Conread position:
               209-718
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 8
               

               Conread position:
               209-718
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 56
               

               Conread position:
               209-719
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 80
               

               Conread position:
               210-453
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               144, 59
               

               Conread position:
               211-435
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               12, 61
               

               Conread position:
               211-453
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               58, 76
               

               Conread position:
               211-657
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 64
               

               Conread position:
               211-717
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 56
               

               Conread position:
               211-719
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               342, 58
               

               Conread position:
               211-719
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 58
               

               Conread position:
               211-719
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 19
               

               Conread position:
               212-353
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               11, 119
               

               Conread position:
               212-442
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               145, 16
               

               Conread position:
               212-445
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               145, 71
               

               Conread position:
               212-455
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               145, 57
               

               Conread position:
               212-523
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               145, 53
               

               Conread position:
               212-577
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 25
               

               Conread position:
               212-693
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 69
               

               Conread position:
               213-351
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               213-391
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               63, 121
               

               Conread position:
               213-432
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               179
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               84, 58
               

               Conread position:
               213-444
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               10, 59
               

               Conread position:
               213-445
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               141, 54
               

               Conread position:
               213-454
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               188
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               106, 39
               

               Conread position:
               213-470
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               135, 66
               

               Conread position:
               213-494
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               242, 75
               

               Conread position:
               213-539
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 17
               

               Conread position:
               214-454
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               186
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               136, 76
               

               Conread position:
               214-656
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 57
               

               Conread position:
               215-453
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               139, 80
               

               Conread position:
               217-415
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               75, 54
               

               Conread position:
               217-429
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               170
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               85, 55
               

               Conread position:
               217-441
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               140, 54
               

               Conread position:
               217-455
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               101, 51
               

               Conread position:
               217-637
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               279
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               107, 47
               

               Conread position:
               217-645
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 54
               

               Conread position:
               217-649
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 7
               

               Conread position:
               217-719
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 45
               

               Conread position:
               218-404
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               82, 54
               

               Conread position:
               218-619
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 57
               

               Conread position:
               218-628
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 66
               

               Conread position:
               218-642
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 42
               

               Conread position:
               220-717
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 55
               

               Conread position:
               221-719
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 202
               

               Conread position:
               222-538
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               132, 6
               

               Conread position:
               224-557
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               329, 36
               

               Conread position:
               225-623
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 11
               

               Conread position:
               225-686
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               319
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               107, 50
               

               Conread position:
               225-719
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 47
               

               Conread position:
               227-453
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               127, 32
               

               Conread position:
               230-454
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               127, 41
               

               Conread position:
               230-719
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 31
               

               Conread position:
               235-626
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 40
               

               Conread position:
               239-454
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 32
               

               Conread position:
               258-412
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               92, 9
               

               Conread position:
               263-453
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               94, 71
               

               Conread position:
               263-454
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               263-647
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 89
               

               Conread position:
               268-425
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               268-502
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               88, 72
               

               Conread position:
               268-595
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               98, 137
               

               Conread position:
               268-611
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 299
               

               Conread position:
               268-719
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 64
               
Show alignments to all cow chromosomes.