Cow genome map

Conread name: Ova1-OVRM10092F12

Conread position: 84-453
Cow position: chr20:10759342-10759689 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 247
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 122, 26

Conread position: 134-378
Cow position: chr20:38858302-38858557 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 184
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 40, 7

Conread position: 135-351
Cow position: chr20:11355314-11355097 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 31, 142

Conread position: 135-419
Cow position: chr20:14471445-14471739 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 92

Conread position: 135-557
Cow position: chr20:32668097-32667661 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 95

Conread position: 138-450
Cow position: chr20:5827030-5826716 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 213
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 13, 41

Conread position: 190-719
Cow position: chr20:10235892-10235364 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 50

Conread position: 191-432
Cow position: chr20:12041114-12041350 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 186
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 15, 53

Conread position: 193-422
Cow position: chr20:34108141-34107923 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 164, 10

Conread position: 194-423
Cow position: chr20:27407845-27408073 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 154, 30

Conread position: 194-431
Cow position: chr20:6603072-6602835 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 12, 73

Conread position: 194-449
Cow position: chr20:40511726-40511977 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 193
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 15, 85

Conread position: 194-454
Cow position: chr20:29632970-29633216 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 181
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 9

Conread position: 194-493
Cow position: chr20:10033890-10034194 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 219
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 12, 75

Conread position: 194-534
Cow position: chr20:6240491-6240834 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 242
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 154, 15

Conread position: 194-537
Cow position: chr20:35797641-35797299 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 41

Conread position: 194-719
Cow position: chr20:22313131-22313644 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 41

Conread position: 195-512
Cow position: chr20:12581926-12582231 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 77

Conread position: 197-459
Cow position: chr20:20359755-20360003 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 189
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 10, 75

Conread position: 198-348
Cow position: chr20:23235065-23234917 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 17, 75

Conread position: 198-511
Cow position: chr20:14679648-14679335 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 227
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 111, 73

Conread position: 199-364
Cow position: chr20:22484888-22484725 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 157, 26

Conread position: 199-443
Cow position: chr20:28296320-28296076 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 176
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 17, 86

Conread position: 199-534
Cow position: chr20:5998645-5998979 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 246
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 15, 65

Conread position: 201-469
Cow position: chr20:20312723-20312977 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 195
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 89, 17

Conread position: 201-494
Cow position: chr20:7659193-7659474 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 201
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 17, 61

Conread position: 201-569
Cow position: chr20:7550262-7549917 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 261
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 156, 17

Conread position: 201-719
Cow position: chr20:21325140-21324619 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 60

Conread position: 203-324
Cow position: chr20:15918005-15917888 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 70

Conread position: 203-431
Cow position: chr20:15593315-15593094 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 154, 15

Conread position: 203-435
Cow position: chr20:27001416-27001188 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 186
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 12, 66

Conread position: 203-719
Cow position: chr20:13048390-13048908 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 70

Conread position: 203-719
Cow position: chr20:19410345-19410851 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 20

Conread position: 204-350
Cow position: chr20:8261929-8261791 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 103, 13

Conread position: 204-613
Cow position: chr20:33177211-33176818 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 273
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 103, 71

Conread position: 204-718
Cow position: chr20:4894871-4895385 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 35

Conread position: 205-453
Cow position: chr20:20471801-20471566 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 189
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 139, 12

Conread position: 205-538
Cow position: chr20:39398506-39398171 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 237
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 151, 67

Conread position: 205-610
Cow position: chr20:38123910-38123499 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 68

Conread position: 205-659
Cow position: chr20:23064810-23065271 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 57

Conread position: 205-718
Cow position: chr20:32153526-32153016 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 76

Conread position: 207-719
Cow position: chr20:746966-746467 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 73

Conread position: 208-432
Cow position: chr20:24869018-24869231 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 140, 9

Conread position: 208-453
Cow position: chr20:7442110-7442348 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 125, 60

Conread position: 209-453
Cow position: chr20:23505842-23505605 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 124, 15

Conread position: 209-716
Cow position: chr20:25686334-25686830 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 42

Conread position: 209-719
Cow position: chr20:4755815-4756310 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 50

Conread position: 211-454
Cow position: chr20:25823297-25823059 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 187
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 70, 13

Conread position: 211-592
Cow position: chr20:28982713-28982341 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 64

Conread position: 211-715
Cow position: chr20:12995996-12996499 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 62

Conread position: 211-719
Cow position: chr20:5104428-5104922 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 353, 13

Conread position: 212-449
Cow position: chr20:41500525-41500763 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 177
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 134, 60

Conread position: 212-538
Cow position: chr20:19328415-19328093 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 63

Conread position: 212-716
Cow position: chr20:14735689-14735170 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 63

Conread position: 213-343
Cow position: chr20:19339860-19339986 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 110
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 57, 0

Conread position: 213-379
Cow position: chr20:24234168-24234010 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 104, 25

Conread position: 213-452
Cow position: chr20:26996546-26996311 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 137, 62

Conread position: 213-453
Cow position: chr20:35897531-35897294 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 144, 73

Conread position: 213-454
Cow position: chr20:32577909-32578145 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 182
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 26, 65

Conread position: 213-613
Cow position: chr20:18320779-18321176 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 62

Conread position: 213-715
Cow position: chr20:6096481-6096967 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 56

Conread position: 214-339
Cow position: chr20:39056030-39056151 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 214-356
Cow position: chr20:37609242-37609105 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 214-454
Cow position: chr20:220633-220393 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 184
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 109, 59

Conread position: 214-454
Cow position: chr20:15073824-15074057 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 183
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 143, 74

Conread position: 214-719
Cow position: chr20:19351741-19352255 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 215

Conread position: 214-719
Cow position: chr20:28888914-28888394 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 55

Conread position: 216-432
Cow position: chr20:33178511-33178729 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 169
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 132, 44

Conread position: 217-404
Cow position: chr20:614675-614490 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 139, 72

Conread position: 217-443
Cow position: chr20:19266163-19265943 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 176
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 131, 54

Conread position: 217-459
Cow position: chr20:38873000-38873239 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 170
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 104, 8

Conread position: 217-613
Cow position: chr20:31746621-31747005 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 7

Conread position: 217-697
Cow position: chr20:26077089-26076616 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 54

Conread position: 217-709
Cow position: chr20:26880900-26881409 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 56

Conread position: 217-719
Cow position: chr20:18413863-18413378 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 55

Conread position: 217-719
Cow position: chr20:23792619-23792115 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 59

Conread position: 217-719
Cow position: chr20:27977699-27978223 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 66

Conread position: 217-719
Cow position: chr20:42138382-42137898 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 54

Conread position: 218-546
Cow position: chr20:12334383-12334066 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 58

Conread position: 218-719
Cow position: chr20:19146882-19146381 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 57

Conread position: 219-451
Cow position: chr20:4359654-4359876 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 219, 52

Conread position: 219-488
Cow position: chr20:40127329-40127593 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 138, 53

Conread position: 219-494
Cow position: chr20:31464370-31464643 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 189
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 129, 64

Conread position: 220-650
Cow position: chr20:14831609-14832045 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 34

Conread position: 220-719
Cow position: chr20:9433591-9433124 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 333, 66

Conread position: 220-719
Cow position: chr20:34202655-34202162 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 59

Conread position: 225-429
Cow position: chr20:35907051-35907246 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 132, 50

Conread position: 225-719
Cow position: chr20:14806886-14806401 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 47

Conread position: 227-715
Cow position: chr20:40781966-40781496 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 41

Conread position: 230-639
Cow position: chr20:39415740-39415333 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 297
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 118, 45

Conread position: 231-418
Cow position: chr20:12362871-12363049 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 95, 20

Conread position: 238-453
Cow position: chr20:14759673-14759888 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 113, 37

Conread position: 238-691
Cow position: chr20:40256958-40256538 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 305
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 37, 0

Conread position: 238-719
Cow position: chr20:3781439-3781920 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 31

Conread position: 264-502
Cow position: chr20:37093548-37093782 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 179
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 93, 30

Conread position: 267-605
Cow position: chr20:33532271-33531936 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 50

Conread position: 268-530
Cow position: chr20:13752202-13751945 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 191
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 89, 154

Conread position: 268-612
Cow position: chr20:5702711-5702367 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 143

Conread position: 268-717
Cow position: chr20:41977377-41976935 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 81

Conread position: 274-654
Cow position: chr20:3891997-3891614 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 123

Show alignments to all cow chromosomes.