Cow genome map
| Conread name: | Ova1-OVRM10092F12 |
| Conread position: | 81-403 |
| Cow position: | chr23:32148211-32148551 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 35, 109 |
| Conread position: | 134-380 |
| Cow position: | chr23:16793669-16793406 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 36, 255 |
| Conread position: | 171-719 |
| Cow position: | chr23:23470954-23470408 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 85 |
| Conread position: | 181-660 |
| Cow position: | chr23:22530409-22530870 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 57 |
| Conread position: | 191-365 |
| Cow position: | chr23:40651470-40651639 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 71, 96 |
| Conread position: | 192-569 |
| Cow position: | chr23:5402227-5402632 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 274 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 127, 230 |
| Conread position: | 194-445 |
| Cow position: | chr23:20056875-20057124 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 12, 74 |
| Conread position: | 194-447 |
| Cow position: | chr23:41589926-41590168 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 134, 55 |
| Conread position: | 194-532 |
| Cow position: | chr23:25408823-25408494 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 94 |
| Conread position: | 194-638 |
| Cow position: | chr23:1923847-1924286 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 19 |
| Conread position: | 198-574 |
| Cow position: | chr23:31607165-31607558 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 27 |
| Conread position: | 199-477 |
| Cow position: | chr23:33232922-33233194 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 20, 81 |
| Conread position: | 201-436 |
| Cow position: | chr23:28721238-28721447 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 156, 23 |
| Conread position: | 201-439 |
| Cow position: | chr23:33695788-33696026 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 17, 79 |
| Conread position: | 201-454 |
| Cow position: | chr23:33711744-33711505 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 91, 16 |
| Conread position: | 201-719 |
| Cow position: | chr23:344192-344703 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 11 |
| Conread position: | 201-719 |
| Cow position: | chr23:9711596-9712136 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 70 |
| Conread position: | 203-450 |
| Cow position: | chr23:21452749-21452995 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 24, 70 |
| Conread position: | 204-718 |
| Cow position: | chr23:20585719-20586249 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 7 |
| Conread position: | 205-453 |
| Cow position: | chr23:16881182-16881422 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 22, 71 |
| Conread position: | 205-533 |
| Cow position: | chr23:24509679-24509358 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 21 |
| Conread position: | 205-606 |
| Cow position: | chr23:2501877-2502279 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 204, 13 |
| Conread position: | 207-432 |
| Cow position: | chr23:16700060-16700283 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 20, 66 |
| Conread position: | 207-538 |
| Cow position: | chr23:9734392-9734069 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 68 |
| Conread position: | 207-696 |
| Cow position: | chr23:15710093-15710585 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 70 |
| Conread position: | 208-409 |
| Cow position: | chr23:32662554-32662354 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 142, 67 |
| Conread position: | 209-557 |
| Cow position: | chr23:10415053-10415394 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 8 |
| Conread position: | 210-490 |
| Cow position: | chr23:29459116-29459396 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 212 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 128, 65 |
| Conread position: | 211-719 |
| Cow position: | chr23:7845270-7844760 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 59 |
| Conread position: | 212-441 |
| Cow position: | chr23:29034289-29034060 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 29, 12 |
| Conread position: | 212-494 |
| Cow position: | chr23:16563813-16563537 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 199 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 213-401 |
| Cow position: | chr23:28894986-28895181 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 83, 101 |
| Conread position: | 213-428 |
| Cow position: | chr23:40891331-40891122 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 144, 62 |
| Conread position: | 213-454 |
| Cow position: | chr23:37224096-37224332 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 182 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 135, 59 |
| Conread position: | 213-509 |
| Cow position: | chr23:20752985-20752692 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 58 |
| Conread position: | 213-549 |
| Cow position: | chr23:40781295-40780967 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 22 |
| Conread position: | 213-557 |
| Cow position: | chr23:24867277-24866936 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 242 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 135, 54 |
| Conread position: | 213-660 |
| Cow position: | chr23:3745580-3745137 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 60 |
| Conread position: | 213-715 |
| Cow position: | chr23:16609836-16610341 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 82 |
| Conread position: | 213-717 |
| Cow position: | chr23:1428781-1428279 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 256, 43 |
| Conread position: | 213-719 |
| Cow position: | chr23:37190614-37191113 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 27 |
| Conread position: | 214-326 |
| Cow position: | chr23:496406-496514 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 214-419 |
| Cow position: | chr23:25407478-25407683 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 128, 57 |
| Conread position: | 214-473 |
| Cow position: | chr23:16237281-16237544 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 57 |
| Conread position: | 216-611 |
| Cow position: | chr23:360947-361338 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 59 |
| Conread position: | 217-380 |
| Cow position: | chr23:30773710-30773871 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 121, 56 |
| Conread position: | 217-392 |
| Cow position: | chr23:35177285-35177113 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 137, 45 |
| Conread position: | 217-418 |
| Cow position: | chr23:21659911-21659707 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 110, 50 |
| Conread position: | 217-419 |
| Cow position: | chr23:30210376-30210575 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 116, 55 |
| Conread position: | 217-437 |
| Cow position: | chr23:15872729-15872950 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 131, 52 |
| Conread position: | 217-441 |
| Cow position: | chr23:17000675-17000448 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 69, 122 |
| Conread position: | 217-453 |
| Cow position: | chr23:28700964-28700737 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 131, 21 |
| Conread position: | 217-479 |
| Cow position: | chr23:20171544-20171288 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 127, 71 |
| Conread position: | 217-631 |
| Cow position: | chr23:26067076-26066655 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 39 |
| Conread position: | 217-686 |
| Cow position: | chr23:19636293-19636754 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 54 |
| Conread position: | 217-715 |
| Cow position: | chr23:40862311-40861827 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 55 |
| Conread position: | 218-445 |
| Cow position: | chr23:1991462-1991684 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 218-454 |
| Cow position: | chr23:36199257-36199027 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 120, 54 |
| Conread position: | 218-494 |
| Cow position: | chr23:3247551-3247285 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 218-528 |
| Cow position: | chr23:37065809-37065501 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 54 |
| Conread position: | 218-666 |
| Cow position: | chr23:9594864-9595304 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 54 |
| Conread position: | 218-719 |
| Cow position: | chr23:13599311-13598825 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 61 |
| Conread position: | 218-719 |
| Cow position: | chr23:25675733-25676190 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 341 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 139, 50 |
| Conread position: | 218-719 |
| Cow position: | chr23:36309387-36308888 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 48 |
| Conread position: | 219-443 |
| Cow position: | chr23:25531483-25531699 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 138, 44 |
| Conread position: | 224-432 |
| Cow position: | chr23:38248854-38248656 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 224-479 |
| Cow position: | chr23:187138-186879 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 128, 43 |
| Conread position: | 225-425 |
| Cow position: | chr23:27544788-27544595 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 132, 41 |
| Conread position: | 227-442 |
| Cow position: | chr23:4810711-4810496 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 131, 68 |
| Conread position: | 230-719 |
| Cow position: | chr23:9268547-9268060 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 29 |
| Conread position: | 233-453 |
| Cow position: | chr23:14662053-14662261 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 114, 39 |
| Conread position: | 238-432 |
| Cow position: | chr23:3140810-3140620 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 110, 30 |
| Conread position: | 245-719 |
| Cow position: | chr23:16170639-16170164 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 72 |
| Conread position: | 268-454 |
| Cow position: | chr23:29345835-29346025 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 86, 158 |
| Conread position: | 268-696 |
| Cow position: | chr23:4338682-4339123 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 254 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 80, 180 |
| Conread position: | 268-719 |
| Cow position: | chr23:3208698-3209143 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 139 |
Show alignments to all cow chromosomes.