Cow genome map


           Conread name:
           Ova1-OVRM10092F12
        

               Conread position:
               135-450
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               236
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               29, 298
               

               Conread position:
               135-581
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 59
               

               Conread position:
               172-477
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 10
               

               Conread position:
               179-719
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 15
               

               Conread position:
               181-639
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 25
               

               Conread position:
               193-530
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 10
               

               Conread position:
               197-414
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               171
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               106, 33
               

               Conread position:
               197-454
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               14, 60
               

               Conread position:
               197-613
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               280
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               6, 91
               

               Conread position:
               197-663
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 96
               

               Conread position:
               198-432
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               103, 19
               

               Conread position:
               198-445
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               17, 70
               

               Conread position:
               198-453
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               194
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               14, 65
               

               Conread position:
               198-716
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 69
               

               Conread position:
               198-717
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 74
               

               Conread position:
               198-718
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 91
               

               Conread position:
               199-454
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               11, 71
               

               Conread position:
               201-460
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 74
               

               Conread position:
               201-719
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 51
               

               Conread position:
               203-432
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               11, 60
               

               Conread position:
               203-489
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               148, 7
               

               Conread position:
               203-505
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               215
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               154, 22
               

               Conread position:
               203-673
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 15
               

               Conread position:
               203-715
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 66
               

               Conread position:
               203-719
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 15
               

               Conread position:
               203-719
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 33
               

               Conread position:
               204-484
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               139, 13
               

               Conread position:
               204-507
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 20
               

               Conread position:
               204-719
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 7
               

               Conread position:
               204-719
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 64
               

               Conread position:
               205-340
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               205-628
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 13
               

               Conread position:
               208-456
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               188
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               146, 63
               

               Conread position:
               209-439
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               138, 63
               

               Conread position:
               209-445
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               117, 77
               

               Conread position:
               209-521
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 68
               

               Conread position:
               209-613
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 59
               

               Conread position:
               210-719
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 14
               

               Conread position:
               211-432
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               146, 61
               

               Conread position:
               211-719
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 60
               

               Conread position:
               212-511
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 44
               

               Conread position:
               213-350
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               88, 59
               

               Conread position:
               213-415
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               158, 58
               

               Conread position:
               213-443
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               109, 58
               

               Conread position:
               213-451
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               143, 5
               

               Conread position:
               213-469
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               30, 59
               

               Conread position:
               214-534
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 58
               

               Conread position:
               214-719
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 63
               

               Conread position:
               217-339
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               217-409
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               217-453
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               217-494
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 58
               

               Conread position:
               217-534
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 51
               

               Conread position:
               217-590
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 62
               

               Conread position:
               217-629
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 55
               

               Conread position:
               217-716
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 43
               

               Conread position:
               217-719
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 77
               

               Conread position:
               218-435
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               218-448
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               136, 57
               

               Conread position:
               218-451
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               218-578
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 49
               

               Conread position:
               218-636
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 57
               

               Conread position:
               218-664
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 61
               

               Conread position:
               218-675
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               219-447
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               129, 53
               

               Conread position:
               220-716
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 63
               

               Conread position:
               221-395
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               127, 55
               

               Conread position:
               222-419
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               132, 53
               

               Conread position:
               225-632
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               227-719
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 48
               

               Conread position:
               229-350
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               230-464
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               107, 65
               

               Conread position:
               230-715
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 39
               

               Conread position:
               230-719
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 49
               

               Conread position:
               231-528
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 48
               

               Conread position:
               242-494
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               176, 27
               

               Conread position:
               268-454
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               124, 63
               

               Conread position:
               268-718
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 74
               

               Conread position:
               274-417
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               80, 97
               
Show alignments to all cow chromosomes.