Cow genome map
| Conread name: | Ova1-OVRM10092F12 |
| Conread position: | 128-599 |
| Cow position: | chr25:37469827-37469359 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 44 |
| Conread position: | 131-718 |
| Cow position: | chr25:27504112-27504706 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 156 |
| Conread position: | 164-719 |
| Cow position: | chr25:13333449-13332886 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 116 |
| Conread position: | 182-683 |
| Cow position: | chr25:38358096-38357628 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 35 |
| Conread position: | 194-450 |
| Cow position: | chr25:28187960-28188216 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 12, 18 |
| Conread position: | 194-661 |
| Cow position: | chr25:12824033-12824504 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 81 |
| Conread position: | 194-719 |
| Cow position: | chr25:20076481-20075965 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 79 |
| Conread position: | 197-519 |
| Cow position: | chr25:9957056-9957369 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 259, 82 |
| Conread position: | 198-325 |
| Cow position: | chr25:16691646-16691523 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 201-432 |
| Cow position: | chr25:10204893-10205128 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 11, 27 |
| Conread position: | 201-442 |
| Cow position: | chr25:16001546-16001779 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 156, 17 |
| Conread position: | 201-459 |
| Cow position: | chr25:36081856-36081600 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 145, 74 |
| Conread position: | 201-655 |
| Cow position: | chr25:26654890-26654439 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 75 |
| Conread position: | 201-719 |
| Cow position: | chr25:33959274-33959776 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 92 |
| Conread position: | 203-492 |
| Cow position: | chr25:25961935-25961654 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 8 |
| Conread position: | 204-425 |
| Cow position: | chr25:21289322-21289099 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 98, 20 |
| Conread position: | 204-620 |
| Cow position: | chr25:7641478-7641881 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 287 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 126, 63 |
| Conread position: | 204-717 |
| Cow position: | chr25:35347884-35347374 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 68 |
| Conread position: | 205-366 |
| Cow position: | chr25:26457705-26457866 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 94, 64 |
| Conread position: | 205-519 |
| Cow position: | chr25:36036807-36037125 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 152, 20 |
| Conread position: | 205-663 |
| Cow position: | chr25:18161262-18160834 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 64 |
| Conread position: | 206-674 |
| Cow position: | chr25:13569197-13569660 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 346, 12 |
| Conread position: | 208-676 |
| Cow position: | chr25:4002773-4002313 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 320 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 110, 67 |
| Conread position: | 209-719 |
| Cow position: | chr25:23410635-23410125 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 69 |
| Conread position: | 211-453 |
| Cow position: | chr25:8512121-8512360 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 61 |
| Conread position: | 211-716 |
| Cow position: | chr25:37687208-37687681 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 36 |
| Conread position: | 212-367 |
| Cow position: | chr25:32606353-32606509 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 136, 59 |
| Conread position: | 212-432 |
| Cow position: | chr25:22736083-22735875 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 202, 21 |
| Conread position: | 212-463 |
| Cow position: | chr25:40338869-40338637 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 212-524 |
| Cow position: | chr25:2126434-2126129 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 227 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 140, 50 |
| Conread position: | 212-695 |
| Cow position: | chr25:14791722-14791249 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 55 |
| Conread position: | 213-453 |
| Cow position: | chr25:20785616-20785852 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 12, 61 |
| Conread position: | 213-575 |
| Cow position: | chr25:12234794-12235148 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 45 |
| Conread position: | 213-719 |
| Cow position: | chr25:10012078-10012587 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 59 |
| Conread position: | 214-370 |
| Cow position: | chr25:11989541-11989704 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 214-405 |
| Cow position: | chr25:36033404-36033215 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 125, 59 |
| Conread position: | 214-436 |
| Cow position: | chr25:14467113-14467334 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 57 |
| Conread position: | 214-718 |
| Cow position: | chr25:20496502-20496003 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 35 |
| Conread position: | 214-719 |
| Cow position: | chr25:2136320-2135832 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 54 |
| Conread position: | 216-426 |
| Cow position: | chr25:8560828-8560627 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 141, 55 |
| Conread position: | 217-408 |
| Cow position: | chr25:17365298-17365481 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 217-442 |
| Cow position: | chr25:16400299-16400507 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 217-442 |
| Cow position: | chr25:22575557-22575776 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 131, 54 |
| Conread position: | 217-453 |
| Cow position: | chr25:24405772-24406009 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 54 |
| Conread position: | 217-487 |
| Cow position: | chr25:8347472-8347206 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 58 |
| Conread position: | 217-539 |
| Cow position: | chr25:40957024-40957341 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 54 |
| Conread position: | 217-557 |
| Cow position: | chr25:12239184-12239509 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 54 |
| Conread position: | 217-624 |
| Cow position: | chr25:29215427-29215848 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 287 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 140, 18 |
| Conread position: | 217-636 |
| Cow position: | chr25:21191450-21191039 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 46 |
| Conread position: | 217-717 |
| Cow position: | chr25:10748532-10749029 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 11 |
| Conread position: | 218-407 |
| Cow position: | chr25:29312378-29312565 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 134, 40 |
| Conread position: | 218-697 |
| Cow position: | chr25:36779459-36778988 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 57 |
| Conread position: | 218-716 |
| Cow position: | chr25:12204432-12203939 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 54 |
| Conread position: | 218-719 |
| Cow position: | chr25:14570334-14569829 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 53 |
| Conread position: | 219-407 |
| Cow position: | chr25:16007755-16007566 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 129, 53 |
| Conread position: | 220-454 |
| Cow position: | chr25:14196820-14196585 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 128, 45 |
| Conread position: | 220-560 |
| Cow position: | chr25:23389319-23389649 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 55 |
| Conread position: | 220-719 |
| Cow position: | chr25:395313-394819 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 51 |
| Conread position: | 225-719 |
| Cow position: | chr25:27531319-27531798 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 42 |
| Conread position: | 231-454 |
| Cow position: | chr25:12756615-12756839 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 119, 57 |
| Conread position: | 231-687 |
| Cow position: | chr25:26757386-26756931 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 48 |
| Conread position: | 237-539 |
| Cow position: | chr25:30816781-30816471 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 223 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 7, 12 |
| Conread position: | 238-712 |
| Cow position: | chr25:2111025-2110558 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 117 |
| Conread position: | 252-719 |
| Cow position: | chr25:35607788-35608254 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 26 |
| Conread position: | 261-613 |
| Cow position: | chr25:22909920-22910298 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 146 |
| Conread position: | 267-607 |
| Cow position: | chr25:2414737-2414412 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 239 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 286, 79 |
| Conread position: | 268-454 |
| Cow position: | chr25:21266927-21266736 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 268-481 |
| Cow position: | chr25:21894969-21895184 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 89, 154 |
| Conread position: | 268-506 |
| Cow position: | chr25:17975450-17975689 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 89, 0 |
Show alignments to all cow chromosomes.