Cow genome map
| Conread name: | Ova1-OVRM10092F12 |
| Conread position: | 135-439 |
| Cow position: | chr26:33212287-33212603 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 48, 150 |
| Conread position: | 173-454 |
| Cow position: | chr26:10767886-10768150 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 32, 9 |
| Conread position: | 188-396 |
| Cow position: | chr26:3019409-3019621 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 89, 22 |
| Conread position: | 194-444 |
| Cow position: | chr26:12669203-12668959 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 12, 64 |
| Conread position: | 194-498 |
| Cow position: | chr26:5246475-5246784 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 94, 15 |
| Conread position: | 194-718 |
| Cow position: | chr26:2389046-2389576 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 19 |
| Conread position: | 194-719 |
| Cow position: | chr26:6475424-6475946 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 76 |
| Conread position: | 197-470 |
| Cow position: | chr26:33567042-33567308 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 30, 79 |
| Conread position: | 198-432 |
| Cow position: | chr26:20129671-20129904 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 182 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 150, 66 |
| Conread position: | 198-453 |
| Cow position: | chr26:14924485-14924249 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 14, 59 |
| Conread position: | 202-696 |
| Cow position: | chr26:8896889-8897381 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 10 |
| Conread position: | 203-510 |
| Cow position: | chr26:5685444-5685130 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 220 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 90, 15 |
| Conread position: | 203-719 |
| Cow position: | chr26:2246950-2246425 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 14 |
| Conread position: | 204-464 |
| Cow position: | chr26:32897874-32898131 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 9, 67 |
| Conread position: | 204-719 |
| Cow position: | chr26:29353512-29354045 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 7 |
| Conread position: | 205-426 |
| Cow position: | chr26:15200520-15200739 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 17, 47 |
| Conread position: | 208-374 |
| Cow position: | chr26:30605369-30605534 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 140, 63 |
| Conread position: | 211-351 |
| Cow position: | chr26:27585762-27585627 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 211-432 |
| Cow position: | chr26:17204159-17204367 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 146, 26 |
| Conread position: | 211-454 |
| Cow position: | chr26:9104293-9104532 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 96, 24 |
| Conread position: | 211-454 |
| Cow position: | chr26:9632383-9632621 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 139, 48 |
| Conread position: | 211-513 |
| Cow position: | chr26:4323294-4323596 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 11, 61 |
| Conread position: | 212-453 |
| Cow position: | chr26:17675746-17675980 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 182 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 212-454 |
| Cow position: | chr26:7103044-7103288 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 60 |
| Conread position: | 212-454 |
| Cow position: | chr26:32659465-32659702 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 92, 59 |
| Conread position: | 212-505 |
| Cow position: | chr26:27491514-27491804 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 217 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 137, 67 |
| Conread position: | 212-630 |
| Cow position: | chr26:34108746-34108339 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 23 |
| Conread position: | 212-639 |
| Cow position: | chr26:12155130-12155548 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 24 |
| Conread position: | 212-719 |
| Cow position: | chr26:9604552-9604022 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 61 |
| Conread position: | 212-719 |
| Cow position: | chr26:16549973-16549491 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 64 |
| Conread position: | 213-451 |
| Cow position: | chr26:2609814-2610048 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 135, 55 |
| Conread position: | 213-451 |
| Cow position: | chr26:9666423-9666655 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 213-719 |
| Cow position: | chr26:3921768-3922258 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 13 |
| Conread position: | 214-453 |
| Cow position: | chr26:6828155-6827916 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 126, 74 |
| Conread position: | 214-460 |
| Cow position: | chr26:33745905-33745656 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 60 |
| Conread position: | 215-452 |
| Cow position: | chr26:17289189-17288957 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 8 |
| Conread position: | 217-398 |
| Cow position: | chr26:31605388-31605212 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 217-453 |
| Cow position: | chr26:33227793-33227556 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 6, 55 |
| Conread position: | 217-489 |
| Cow position: | chr26:8277584-8277858 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 205 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 105, 51 |
| Conread position: | 217-532 |
| Cow position: | chr26:4664450-4664756 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 222 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 140, 74 |
| Conread position: | 217-546 |
| Cow position: | chr26:32955650-32955963 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 234 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 83, 55 |
| Conread position: | 217-719 |
| Cow position: | chr26:8034848-8034343 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 73 |
| Conread position: | 217-719 |
| Cow position: | chr26:9867135-9867640 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 50 |
| Conread position: | 217-719 |
| Cow position: | chr26:31794755-31794261 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 24 |
| Conread position: | 218-397 |
| Cow position: | chr26:19110892-19110708 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 218-451 |
| Cow position: | chr26:8811111-8810884 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 139, 57 |
| Conread position: | 218-716 |
| Cow position: | chr26:21351670-21351199 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 340 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 130, 53 |
| Conread position: | 220-453 |
| Cow position: | chr26:26294217-26294438 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 137, 49 |
| Conread position: | 220-699 |
| Cow position: | chr26:18692403-18691931 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 41 |
| Conread position: | 220-719 |
| Cow position: | chr26:19769105-19769600 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 51 |
| Conread position: | 227-625 |
| Cow position: | chr26:7961604-7961216 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 41 |
| Conread position: | 230-441 |
| Cow position: | chr26:30034437-30034643 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 81, 49 |
| Conread position: | 230-719 |
| Cow position: | chr26:30806536-30807026 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 49 |
| Conread position: | 232-625 |
| Cow position: | chr26:6323632-6323242 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 32 |
| Conread position: | 233-454 |
| Cow position: | chr26:32865923-32866144 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 120, 45 |
| Conread position: | 238-407 |
| Cow position: | chr26:21339787-21339621 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 115, 34 |
| Conread position: | 239-704 |
| Cow position: | chr26:782970-783436 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 33 |
| Conread position: | 240-453 |
| Cow position: | chr26:4747896-4748107 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 96, 32 |
| Conread position: | 259-467 |
| Cow position: | chr26:32058602-32058389 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 10, 168 |
| Conread position: | 259-625 |
| Cow position: | chr26:7525522-7525893 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 269 |
| Conread position: | 265-663 |
| Cow position: | chr26:10814148-10813753 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 67 |
| Conread position: | 269-719 |
| Cow position: | chr26:12125382-12125846 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 44 |
| Conread position: | 282-453 |
| Cow position: | chr26:12216769-12216603 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 95, 59 |
Show alignments to all cow chromosomes.