Cow genome map


           Conread name:
           Ova1-OVRM10092F12
        

               Conread position:
               81-689
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 106
               

               Conread position:
               115-696
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 17
               

               Conread position:
               135-452
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               232
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               31, 62
               

               Conread position:
               181-413
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               176, 94
               

               Conread position:
               188-719
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 75
               

               Conread position:
               192-719
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 76
               

               Conread position:
               194-445
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               17, 75
               

               Conread position:
               194-454
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               154, 65
               

               Conread position:
               194-481
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               39, 86
               

               Conread position:
               194-533
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 24
               

               Conread position:
               195-719
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               198-414
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               8, 76
               

               Conread position:
               198-712
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 19
               

               Conread position:
               199-467
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               155, 76
               

               Conread position:
               200-583
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 57
               

               Conread position:
               201-449
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               156, 10
               

               Conread position:
               201-486
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               209
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               13, 72
               

               Conread position:
               201-546
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               238
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               18, 75
               

               Conread position:
               201-717
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 71
               

               Conread position:
               202-539
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 62
               

               Conread position:
               202-719
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 16
               

               Conread position:
               203-432
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 76
               

               Conread position:
               203-445
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               130, 14
               

               Conread position:
               203-445
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 68
               

               Conread position:
               203-517
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               223
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               145, 69
               

               Conread position:
               203-718
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 20
               

               Conread position:
               204-426
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               163, 64
               

               Conread position:
               204-446
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               152, 43
               

               Conread position:
               204-499
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               11, 82
               

               Conread position:
               204-719
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 13
               

               Conread position:
               205-451
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               15, 59
               

               Conread position:
               205-453
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               186
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               153, 61
               

               Conread position:
               205-719
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 68
               

               Conread position:
               207-453
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               150, 60
               

               Conread position:
               207-719
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 65
               

               Conread position:
               208-422
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               29, 224
               

               Conread position:
               208-484
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               196
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               156, 51
               

               Conread position:
               209-405
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               125, 52
               

               Conread position:
               209-459
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               17, 68
               

               Conread position:
               209-719
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 66
               

               Conread position:
               211-419
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               139, 61
               

               Conread position:
               211-506
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 61
               

               Conread position:
               211-700
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 14
               

               Conread position:
               211-719
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 52
               

               Conread position:
               212-517
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 23
               

               Conread position:
               212-596
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               341, 59
               

               Conread position:
               212-719
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               212-719
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 59
               

               Conread position:
               213-369
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               105, 39
               

               Conread position:
               213-406
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               135, 12
               

               Conread position:
               213-551
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               135, 55
               

               Conread position:
               213-716
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 44
               

               Conread position:
               213-718
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 65
               

               Conread position:
               213-719
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 58
               

               Conread position:
               214-443
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               134, 10
               

               Conread position:
               214-451
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 57
               

               Conread position:
               216-347
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               217-357
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               217-446
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               140, 51
               

               Conread position:
               217-557
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 52
               

               Conread position:
               217-676
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 49
               

               Conread position:
               217-684
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 55
               

               Conread position:
               217-697
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 50
               

               Conread position:
               218-454
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               186
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               133, 50
               

               Conread position:
               218-516
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               30, 17
               

               Conread position:
               218-660
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 70
               

               Conread position:
               218-715
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 54
               

               Conread position:
               218-719
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 16
               

               Conread position:
               218-719
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 54
               

               Conread position:
               219-473
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               114, 56
               

               Conread position:
               219-605
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 48
               

               Conread position:
               220-454
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               137, 55
               

               Conread position:
               220-719
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 52
               

               Conread position:
               221-479
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 10
               

               Conread position:
               221-684
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 58
               

               Conread position:
               225-452
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               157, 43
               

               Conread position:
               225-490
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               183, 44
               

               Conread position:
               225-525
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 50
               

               Conread position:
               226-719
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 79
               

               Conread position:
               227-551
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 44
               

               Conread position:
               230-494
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 38
               

               Conread position:
               239-491
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               267-529
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               97, 142
               

               Conread position:
               268-411
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               86, 6
               

               Conread position:
               268-533
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               89, 98
               

               Conread position:
               268-686
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 35
               

               Conread position:
               269-625
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 257
               

               Conread position:
               275-522
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 0
               
Show alignments to all cow chromosomes.