Cow genome map

Conread name: Ova1-OVRM10092F12

Conread position: 81-689
Cow position: chr28:34150405-34151035 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 106

Conread position: 115-696
Cow position: chr28:28590815-28590230 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 17

Conread position: 135-452
Cow position: chr28:28414729-28414410 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 232
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 31, 62

Conread position: 181-413
Cow position: chr28:5188397-5188623 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 176, 94

Conread position: 188-719
Cow position: chr28:5552941-5553431 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 75

Conread position: 192-719
Cow position: chr28:14493538-14493036 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 76

Conread position: 194-445
Cow position: chr28:33052026-33051767 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 181
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 17, 75

Conread position: 194-454
Cow position: chr28:11380049-11380305 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 191
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 154, 65

Conread position: 194-481
Cow position: chr28:22351486-22351202 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 39, 86

Conread position: 194-533
Cow position: chr28:7549067-7549403 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 24

Conread position: 195-719
Cow position: chr28:8787532-8787036 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 198-414
Cow position: chr28:15081933-15082145 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 165
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 8, 76

Conread position: 198-712
Cow position: chr28:13474289-13473795 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 19

Conread position: 199-467
Cow position: chr28:15263728-15263999 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 187
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 155, 76

Conread position: 200-583
Cow position: chr28:18462624-18463020 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 57

Conread position: 201-449
Cow position: chr28:23410339-23410581 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 156, 10

Conread position: 201-486
Cow position: chr28:9390377-9390659 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 209
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 13, 72

Conread position: 201-546
Cow position: chr28:10745200-10744851 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 238
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 18, 75

Conread position: 201-717
Cow position: chr28:10642031-10642543 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 71

Conread position: 202-539
Cow position: chr28:23231077-23231412 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 62

Conread position: 202-719
Cow position: chr28:20124768-20124262 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 16

Conread position: 203-432
Cow position: chr28:11500900-11501132 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 76

Conread position: 203-445
Cow position: chr28:17153752-17153529 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 130, 14

Conread position: 203-445
Cow position: chr28:21873755-21873519 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 68

Conread position: 203-517
Cow position: chr28:12619553-12619240 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 223
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 145, 69

Conread position: 203-718
Cow position: chr28:9285391-9285888 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 20

Conread position: 204-426
Cow position: chr28:11884536-11884757 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 163, 64

Conread position: 204-446
Cow position: chr28:16370096-16370328 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 152, 43

Conread position: 204-499
Cow position: chr28:10669561-10669267 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 204
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 11, 82

Conread position: 204-719
Cow position: chr28:2814525-2815024 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 13

Conread position: 205-451
Cow position: chr28:19026026-19026262 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 59

Conread position: 205-453
Cow position: chr28:15689023-15688780 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 186
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 153, 61

Conread position: 205-719
Cow position: chr28:6486578-6486082 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 68

Conread position: 207-453
Cow position: chr28:26719331-26719099 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 150, 60

Conread position: 207-719
Cow position: chr28:7684701-7685200 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 65

Conread position: 208-422
Cow position: chr28:11007175-11006947 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 29, 224

Conread position: 208-484
Cow position: chr28:27218304-27218029 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 196
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 156, 51

Conread position: 209-405
Cow position: chr28:2737829-2738025 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 125, 52

Conread position: 209-459
Cow position: chr28:16204348-16204601 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 187
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 17, 68

Conread position: 209-719
Cow position: chr28:7865303-7864806 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 66

Conread position: 211-419
Cow position: chr28:17625155-17625364 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 139, 61

Conread position: 211-506
Cow position: chr28:29455680-29455967 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 61

Conread position: 211-700
Cow position: chr28:3914687-3914204 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 14

Conread position: 211-719
Cow position: chr28:26103685-26103200 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 52

Conread position: 212-517
Cow position: chr28:19222621-19222919 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 23

Conread position: 212-596
Cow position: chr28:30978249-30977884 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 59

Conread position: 212-719
Cow position: chr28:11752167-11752672 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 51

Conread position: 212-719
Cow position: chr28:34208682-34208189 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 59

Conread position: 213-369
Cow position: chr28:21570162-21570012 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 105, 39

Conread position: 213-406
Cow position: chr28:21940171-21939981 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 135, 12

Conread position: 213-551
Cow position: chr28:5128757-5129071 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 230
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 135, 55

Conread position: 213-716
Cow position: chr28:15677863-15677367 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 44

Conread position: 213-718
Cow position: chr28:8022135-8022634 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 65

Conread position: 213-719
Cow position: chr28:32300385-32300897 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 58

Conread position: 214-443
Cow position: chr28:23776019-23775793 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 134, 10

Conread position: 214-451
Cow position: chr28:23621518-23621289 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 57

Conread position: 216-347
Cow position: chr28:33285142-33285267 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 217-357
Cow position: chr28:4763846-4763713 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 217-446
Cow position: chr28:25596597-25596378 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 140, 51

Conread position: 217-557
Cow position: chr28:6971379-6971705 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 52

Conread position: 217-676
Cow position: chr28:3256768-3256321 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 49

Conread position: 217-684
Cow position: chr28:13693722-13693247 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 55

Conread position: 217-697
Cow position: chr28:7751332-7751791 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 50

Conread position: 218-454
Cow position: chr28:9176785-9177016 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 186
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 133, 50

Conread position: 218-516
Cow position: chr28:15008131-15007840 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 214
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 30, 17

Conread position: 218-660
Cow position: chr28:7607202-7606739 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 70

Conread position: 218-715
Cow position: chr28:10533964-10534455 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 54

Conread position: 218-719
Cow position: chr28:22170746-22171253 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 16

Conread position: 218-719
Cow position: chr28:23840171-23839690 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 54

Conread position: 219-473
Cow position: chr28:20963563-20963811 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 191
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 114, 56

Conread position: 219-605
Cow position: chr28:4022354-4021972 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 48

Conread position: 220-454
Cow position: chr28:16252892-16253117 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 137, 55

Conread position: 220-719
Cow position: chr28:25564049-25563564 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 52

Conread position: 221-479
Cow position: chr28:31871780-31872034 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 10

Conread position: 221-684
Cow position: chr28:14151200-14150749 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 58

Conread position: 225-452
Cow position: chr28:3492822-3493044 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 157, 43

Conread position: 225-490
Cow position: chr28:23007771-23008026 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 194
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 183, 44

Conread position: 225-525
Cow position: chr28:7590218-7590516 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 50

Conread position: 226-719
Cow position: chr28:21103874-21104369 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 79

Conread position: 227-551
Cow position: chr28:17738113-17738437 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 44

Conread position: 230-494
Cow position: chr28:9822019-9822269 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 38

Conread position: 239-491
Cow position: chr28:10035348-10035116 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 194
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 118, 33

Conread position: 267-529
Cow position: chr28:22371751-22372012 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 97, 142

Conread position: 268-411
Cow position: chr28:6993804-6993656 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 123
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 86, 6

Conread position: 268-533
Cow position: chr28:2960907-2961159 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 181
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 89, 98

Conread position: 268-686
Cow position: chr28:18591198-18590771 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 35

Conread position: 269-625
Cow position: chr28:25334948-25334568 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 257

Conread position: 275-522
Cow position: chr28:10514174-10514435 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Show alignments to all cow chromosomes.