Cow genome map
| Conread name: | Ova1-OVRM10092F12 |
| Conread position: | 79-454 |
| Cow position: | chr5:52000347-51999977 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 248 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 26, 32 |
| Conread position: | 134-719 |
| Cow position: | chr5:23640906-23641501 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 123 |
| Conread position: | 135-557 |
| Cow position: | chr5:14538571-14538995 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 151 |
| Conread position: | 138-719 |
| Cow position: | chr5:16893698-16894274 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 139 |
| Conread position: | 150-423 |
| Cow position: | chr5:50215494-50215769 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 43, 15 |
| Conread position: | 169-711 |
| Cow position: | chr5:16185125-16184595 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 368, 49 |
| Conread position: | 173-539 |
| Cow position: | chr5:46122318-46122655 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 191, 9 |
| Conread position: | 174-453 |
| Cow position: | chr5:56385275-56384986 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 222 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 38, 108 |
| Conread position: | 179-637 |
| Cow position: | chr5:41604654-41604183 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 19 |
| Conread position: | 191-539 |
| Cow position: | chr5:26990411-26990071 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 248 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 28, 76 |
| Conread position: | 193-393 |
| Cow position: | chr5:55928957-55928761 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 13, 86 |
| Conread position: | 194-388 |
| Cow position: | chr5:53145871-53146063 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 150, 68 |
| Conread position: | 194-431 |
| Cow position: | chr5:56820248-56820479 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 163, 75 |
| Conread position: | 194-443 |
| Cow position: | chr5:40387860-40388097 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 194-451 |
| Cow position: | chr5:56433819-56433562 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 12, 26 |
| Conread position: | 194-453 |
| Cow position: | chr5:66831698-66831955 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 18, 78 |
| Conread position: | 194-687 |
| Cow position: | chr5:67932454-67932942 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 25 |
| Conread position: | 194-696 |
| Cow position: | chr5:65593885-65593391 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 9 |
| Conread position: | 194-717 |
| Cow position: | chr5:8024181-8024700 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 348 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 94, 75 |
| Conread position: | 194-719 |
| Cow position: | chr5:55756408-55756944 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 84 |
| Conread position: | 196-433 |
| Cow position: | chr5:11427227-11427464 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 114, 27 |
| Conread position: | 197-418 |
| Cow position: | chr5:1688101-1688319 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 13, 126 |
| Conread position: | 197-627 |
| Cow position: | chr5:65924680-65925116 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 184 |
| Conread position: | 197-717 |
| Cow position: | chr5:27690049-27690569 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 15 |
| Conread position: | 198-338 |
| Cow position: | chr5:36407168-36407033 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 198-396 |
| Cow position: | chr5:36486504-36486301 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 137, 91 |
| Conread position: | 198-406 |
| Cow position: | chr5:31561545-31561341 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 14, 98 |
| Conread position: | 198-432 |
| Cow position: | chr5:1950052-1950280 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 8, 71 |
| Conread position: | 198-482 |
| Cow position: | chr5:61488096-61488378 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 76 |
| Conread position: | 198-557 |
| Cow position: | chr5:35209467-35209818 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 19 |
| Conread position: | 198-718 |
| Cow position: | chr5:17028103-17027585 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 20 |
| Conread position: | 198-719 |
| Cow position: | chr5:34115661-34115137 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 70 |
| Conread position: | 199-447 |
| Cow position: | chr5:41165097-41164853 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 20, 78 |
| Conread position: | 201-454 |
| Cow position: | chr5:29560413-29560167 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 16 |
| Conread position: | 201-630 |
| Cow position: | chr5:65887001-65887430 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 11 |
| Conread position: | 201-641 |
| Cow position: | chr5:61840197-61839759 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 10 |
| Conread position: | 201-656 |
| Cow position: | chr5:50821789-50821347 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 201-716 |
| Cow position: | chr5:27155031-27154522 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 88 |
| Conread position: | 202-365 |
| Cow position: | chr5:59356996-59356833 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 146, 10 |
| Conread position: | 202-443 |
| Cow position: | chr5:69773573-69773340 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 155, 34 |
| Conread position: | 203-436 |
| Cow position: | chr5:12803518-12803271 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 189 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 203-539 |
| Cow position: | chr5:51357496-51357829 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 84, 22 |
| Conread position: | 203-677 |
| Cow position: | chr5:74015945-74015480 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 76 |
| Conread position: | 203-719 |
| Cow position: | chr5:29681086-29680583 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 81 |
| Conread position: | 204-355 |
| Cow position: | chr5:39181907-39182053 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 204-392 |
| Cow position: | chr5:34167963-34167780 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 153, 13 |
| Conread position: | 204-442 |
| Cow position: | chr5:30253745-30253515 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 153, 71 |
| Conread position: | 204-447 |
| Cow position: | chr5:74858575-74858338 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 153, 8 |
| Conread position: | 204-448 |
| Cow position: | chr5:48143782-48144027 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 13 |
| Conread position: | 204-528 |
| Cow position: | chr5:39695655-39695339 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 17, 66 |
| Conread position: | 204-539 |
| Cow position: | chr5:23536173-23535846 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 249 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 58, 8 |
| Conread position: | 204-621 |
| Cow position: | chr5:21525174-21524758 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 20 |
| Conread position: | 204-718 |
| Cow position: | chr5:48535808-48535312 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 57 |
| Conread position: | 204-719 |
| Cow position: | chr5:27015684-27015188 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 204-719 |
| Cow position: | chr5:29903515-29904026 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 21 |
| Conread position: | 204-719 |
| Cow position: | chr5:55821378-55820874 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 71 |
| Conread position: | 205-452 |
| Cow position: | chr5:37646543-37646792 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 79, 59 |
| Conread position: | 205-453 |
| Cow position: | chr5:33467039-33467283 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 66 |
| Conread position: | 205-454 |
| Cow position: | chr5:51503013-51502770 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 188 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 126, 52 |
| Conread position: | 205-454 |
| Cow position: | chr5:58144598-58144848 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 102, 70 |
| Conread position: | 205-528 |
| Cow position: | chr5:20554747-20555065 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 20 |
| Conread position: | 205-637 |
| Cow position: | chr5:28946059-28946486 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 66 |
| Conread position: | 205-657 |
| Cow position: | chr5:14314528-14314080 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 70 |
| Conread position: | 205-697 |
| Cow position: | chr5:27615518-27615013 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 66 |
| Conread position: | 205-717 |
| Cow position: | chr5:40711435-40711959 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 6 |
| Conread position: | 205-719 |
| Cow position: | chr5:30276698-30276198 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 12 |
| Conread position: | 206-411 |
| Cow position: | chr5:32282337-32282131 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 144, 11 |
| Conread position: | 206-441 |
| Cow position: | chr5:56070859-56070624 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 9, 70 |
| Conread position: | 206-469 |
| Cow position: | chr5:26595105-26595360 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 120, 12 |
| Conread position: | 206-539 |
| Cow position: | chr5:34288469-34288794 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 239 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 94, 63 |
| Conread position: | 208-344 |
| Cow position: | chr5:33265457-33265584 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 208-451 |
| Cow position: | chr5:31913351-31913102 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 89, 122 |
| Conread position: | 208-451 |
| Cow position: | chr5:50900899-50900669 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 149, 9 |
| Conread position: | 208-503 |
| Cow position: | chr5:18113574-18113864 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 63 |
| Conread position: | 208-539 |
| Cow position: | chr5:51314847-51315175 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 242 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 140, 53 |
| Conread position: | 208-584 |
| Cow position: | chr5:34184229-34183847 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 301 |
| Conread position: | 208-664 |
| Cow position: | chr5:65776382-65776846 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 51 |
| Conread position: | 209-415 |
| Cow position: | chr5:23168830-23169022 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 209-430 |
| Cow position: | chr5:7044709-7044929 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 158, 9 |
| Conread position: | 209-512 |
| Cow position: | chr5:72150246-72149951 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 91, 69 |
| Conread position: | 209-719 |
| Cow position: | chr5:6045290-6044781 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 63 |
| Conread position: | 209-719 |
| Cow position: | chr5:16509095-16508581 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 66 |
| Conread position: | 210-719 |
| Cow position: | chr5:21828864-21828351 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 57 |
| Conread position: | 211-338 |
| Cow position: | chr5:13906865-13906742 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 118, 8 |
| Conread position: | 211-402 |
| Cow position: | chr5:4220982-4220790 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 12, 62 |
| Conread position: | 211-427 |
| Cow position: | chr5:62026950-62027161 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 169 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 146, 61 |
| Conread position: | 211-719 |
| Cow position: | chr5:65932931-65933435 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 23 |
| Conread position: | 212-430 |
| Cow position: | chr5:45037017-45036804 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 145, 63 |
| Conread position: | 212-445 |
| Cow position: | chr5:57127009-57126782 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 136, 76 |
| Conread position: | 212-451 |
| Cow position: | chr5:51076651-51076884 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 11, 77 |
| Conread position: | 212-523 |
| Cow position: | chr5:5111079-5111388 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 63 |
| Conread position: | 212-527 |
| Cow position: | chr5:4797320-4797628 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 60 |
| Conread position: | 212-629 |
| Cow position: | chr5:9430467-9430904 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 40 |
| Conread position: | 212-719 |
| Cow position: | chr5:29828045-29827548 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 213-350 |
| Cow position: | chr5:73556196-73556323 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 213-376 |
| Cow position: | chr5:73526374-73526213 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 138, 60 |
| Conread position: | 213-450 |
| Cow position: | chr5:64399008-64398764 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 189 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 131, 52 |
| Conread position: | 213-453 |
| Cow position: | chr5:37713902-37714146 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 58 |
| Conread position: | 213-521 |
| Cow position: | chr5:65752852-65752550 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 55 |
| Conread position: | 213-527 |
| Cow position: | chr5:41229701-41229396 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 38 |
| Conread position: | 213-719 |
| Cow position: | chr5:45940619-45941139 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 50 |
| Conread position: | 213-719 |
| Cow position: | chr5:57935114-57935607 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 62 |
| Conread position: | 214-442 |
| Cow position: | chr5:1276470-1276705 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 212 |
| Conread position: | 214-453 |
| Cow position: | chr5:34921843-34922076 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 185 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 136, 10 |
| Conread position: | 214-530 |
| Cow position: | chr5:19905273-19905613 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 199 |
| Conread position: | 214-693 |
| Cow position: | chr5:39710836-39710361 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 53 |
| Conread position: | 214-718 |
| Cow position: | chr5:34638878-34638389 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 58 |
| Conread position: | 216-368 |
| Cow position: | chr5:10248690-10248539 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 133, 54 |
| Conread position: | 217-389 |
| Cow position: | chr5:7552427-7552596 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 140, 51 |
| Conread position: | 217-432 |
| Cow position: | chr5:56028537-56028750 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 73, 36 |
| Conread position: | 217-461 |
| Cow position: | chr5:61600410-61600163 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 85, 62 |
| Conread position: | 217-477 |
| Cow position: | chr5:3492186-3491936 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 217-557 |
| Cow position: | chr5:38805357-38805690 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 245 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 120, 45 |
| Conread position: | 217-597 |
| Cow position: | chr5:72564752-72564376 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 8 |
| Conread position: | 217-613 |
| Cow position: | chr5:6987154-6986758 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 51 |
| Conread position: | 217-641 |
| Cow position: | chr5:6896135-6896548 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 54 |
| Conread position: | 217-663 |
| Cow position: | chr5:26562147-26561696 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 54 |
| Conread position: | 217-719 |
| Cow position: | chr5:31469591-31470080 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 62 |
| Conread position: | 217-719 |
| Cow position: | chr5:34678884-34678390 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 42 |
| Conread position: | 217-719 |
| Cow position: | chr5:45706037-45705526 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 62 |
| Conread position: | 217-719 |
| Cow position: | chr5:47704136-47704640 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 13 |
| Conread position: | 217-719 |
| Cow position: | chr5:55942406-55942902 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 13 |
| Conread position: | 218-419 |
| Cow position: | chr5:29212933-29212741 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 90, 17 |
| Conread position: | 218-432 |
| Cow position: | chr5:27411407-27411610 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 218-445 |
| Cow position: | chr5:4032002-4032222 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 218-453 |
| Cow position: | chr5:42744774-42744556 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 218-454 |
| Cow position: | chr5:1343864-1344100 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 42 |
| Conread position: | 218-546 |
| Cow position: | chr5:32140719-32141031 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 139, 45 |
| Conread position: | 218-552 |
| Cow position: | chr5:45225834-45226168 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 61 |
| Conread position: | 218-569 |
| Cow position: | chr5:28927599-28927953 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 51 |
| Conread position: | 218-656 |
| Cow position: | chr5:2500194-2500635 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 54 |
| Conread position: | 218-714 |
| Cow position: | chr5:58856094-58855607 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 57 |
| Conread position: | 219-451 |
| Cow position: | chr5:70581907-70582137 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 177 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 75, 52 |
| Conread position: | 219-546 |
| Cow position: | chr5:60520151-60519841 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 231 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 219-719 |
| Cow position: | chr5:30816708-30816208 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 53 |
| Conread position: | 219-719 |
| Cow position: | chr5:72042212-72041701 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 43 |
| Conread position: | 220-422 |
| Cow position: | chr5:40039782-40039981 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 118, 49 |
| Conread position: | 220-432 |
| Cow position: | chr5:40152466-40152255 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 114, 64 |
| Conread position: | 220-619 |
| Cow position: | chr5:20974456-20974863 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 52 |
| Conread position: | 221-539 |
| Cow position: | chr5:43329706-43330020 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 51 |
| Conread position: | 221-605 |
| Cow position: | chr5:44583141-44583505 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 323, 38 |
| Conread position: | 222-432 |
| Cow position: | chr5:18104154-18104371 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 223-454 |
| Cow position: | chr5:56753713-56753485 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 49 |
| Conread position: | 224-408 |
| Cow position: | chr5:3649472-3649657 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 122, 48 |
| Conread position: | 224-441 |
| Cow position: | chr5:3825071-3824869 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 224-528 |
| Cow position: | chr5:57113954-57113670 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 76, 36 |
| Conread position: | 224-719 |
| Cow position: | chr5:10261254-10261748 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 43 |
| Conread position: | 225-453 |
| Cow position: | chr5:55989730-55989500 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 180 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 71, 35 |
| Conread position: | 225-525 |
| Cow position: | chr5:65941269-65941565 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 227 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 77, 26 |
| Conread position: | 225-663 |
| Cow position: | chr5:47601802-47601362 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 46 |
| Conread position: | 225-719 |
| Cow position: | chr5:52165195-52165684 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 50 |
| Conread position: | 226-426 |
| Cow position: | chr5:35235727-35235923 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 131, 49 |
| Conread position: | 230-413 |
| Cow position: | chr5:21195357-21195534 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 230-425 |
| Cow position: | chr5:503939-504123 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 127, 41 |
| Conread position: | 234-460 |
| Cow position: | chr5:63388769-63388547 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 5, 38 |
| Conread position: | 238-432 |
| Cow position: | chr5:54111892-54111698 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 114, 57 |
| Conread position: | 239-524 |
| Cow position: | chr5:63917441-63917716 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 99, 30 |
| Conread position: | 252-716 |
| Cow position: | chr5:69099494-69099002 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 263-435 |
| Cow position: | chr5:5848240-5848410 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 263-453 |
| Cow position: | chr5:24836996-24837181 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 93, 144 |
| Conread position: | 263-550 |
| Cow position: | chr5:31604685-31604957 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 213 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 94, 64 |
| Conread position: | 264-638 |
| Cow position: | chr5:12672080-12672449 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 67 |
| Conread position: | 268-505 |
| Cow position: | chr5:59443303-59443544 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 183 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 103, 143 |
| Conread position: | 268-546 |
| Cow position: | chr5:44994093-44994379 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 203 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 86, 154 |
| Conread position: | 278-700 |
| Cow position: | chr5:41519636-41520039 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 57 |
Show alignments to all cow chromosomes.