Cow genome map
| Conread name: | Ova1-OVRM10092F12 |
| Conread position: | 88-345 |
| Cow position: | chr9:34106659-34106909 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 13, 29 |
| Conread position: | 88-719 |
| Cow position: | chr9:39428854-39428248 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 22 |
| Conread position: | 128-369 |
| Cow position: | chr9:31886444-31886203 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 42, 99 |
| Conread position: | 130-557 |
| Cow position: | chr9:20039190-20038760 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 94 |
| Conread position: | 170-454 |
| Cow position: | chr9:44408059-44408329 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 96, 39 |
| Conread position: | 170-719 |
| Cow position: | chr9:3931977-3932524 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 8 |
| Conread position: | 173-405 |
| Cow position: | chr9:58979417-58979649 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 27, 16 |
| Conread position: | 182-451 |
| Cow position: | chr9:10666998-10666731 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 22, 107 |
| Conread position: | 183-422 |
| Cow position: | chr9:25502513-25502273 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 25, 43 |
| Conread position: | 183-466 |
| Cow position: | chr9:20319051-20318769 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 35, 174 |
| Conread position: | 191-651 |
| Cow position: | chr9:18093631-18093158 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 82 |
| Conread position: | 193-698 |
| Cow position: | chr9:29808495-29809001 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 169 |
| Conread position: | 194-454 |
| Cow position: | chr9:29034993-29034739 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 12, 84 |
| Conread position: | 194-455 |
| Cow position: | chr9:50544588-50544335 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 194 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 18, 93 |
| Conread position: | 194-512 |
| Cow position: | chr9:38343930-38344250 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 76 |
| Conread position: | 194-613 |
| Cow position: | chr9:9552133-9552539 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 69 |
| Conread position: | 194-718 |
| Cow position: | chr9:28726681-28726171 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 82 |
| Conread position: | 197-418 |
| Cow position: | chr9:24399639-24399424 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 175 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 5, 67 |
| Conread position: | 197-451 |
| Cow position: | chr9:52787496-52787242 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 76 |
| Conread position: | 197-499 |
| Cow position: | chr9:54924665-54924973 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 227 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 148, 98 |
| Conread position: | 197-635 |
| Cow position: | chr9:31640279-31639841 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 15 |
| Conread position: | 197-700 |
| Cow position: | chr9:10127629-10127124 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 75 |
| Conread position: | 198-441 |
| Cow position: | chr9:54437310-54437536 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 199-488 |
| Cow position: | chr9:48343649-48343930 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 135, 13 |
| Conread position: | 201-350 |
| Cow position: | chr9:49985982-49986134 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 201-419 |
| Cow position: | chr9:60459238-60459438 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 201-512 |
| Cow position: | chr9:21030356-21030672 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 74 |
| Conread position: | 201-553 |
| Cow position: | chr9:42998423-42998066 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 36 |
| Conread position: | 202-539 |
| Cow position: | chr9:12322006-12321681 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 245 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 20, 57 |
| Conread position: | 202-715 |
| Cow position: | chr9:34310077-34310598 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 8 |
| Conread position: | 202-719 |
| Cow position: | chr9:7634323-7634823 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 15 |
| Conread position: | 203-389 |
| Cow position: | chr9:42901101-42901279 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 150, 14 |
| Conread position: | 203-454 |
| Cow position: | chr9:8740567-8740818 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 196 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 125, 21 |
| Conread position: | 203-508 |
| Cow position: | chr9:39152628-39152336 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 15 |
| Conread position: | 203-511 |
| Cow position: | chr9:2034225-2034522 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 16 |
| Conread position: | 203-588 |
| Cow position: | chr9:1952218-1951841 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 15 |
| Conread position: | 203-716 |
| Cow position: | chr9:45285477-45284986 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 83 |
| Conread position: | 204-392 |
| Cow position: | chr9:15006699-15006516 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 144, 47 |
| Conread position: | 204-453 |
| Cow position: | chr9:49403810-49404050 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 184, 66 |
| Conread position: | 204-454 |
| Cow position: | chr9:30020022-30020276 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 113, 13 |
| Conread position: | 204-529 |
| Cow position: | chr9:5763582-5763258 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 57 |
| Conread position: | 204-539 |
| Cow position: | chr9:4285213-4284890 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 243 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 144, 55 |
| Conread position: | 204-624 |
| Cow position: | chr9:5141130-5141543 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 91 |
| Conread position: | 204-712 |
| Cow position: | chr9:29006613-29007120 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 68 |
| Conread position: | 204-718 |
| Cow position: | chr9:4858590-4859109 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 13 |
| Conread position: | 204-719 |
| Cow position: | chr9:8998408-8998902 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 14 |
| Conread position: | 204-719 |
| Cow position: | chr9:52633444-52632955 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 19 |
| Conread position: | 205-379 |
| Cow position: | chr9:11363946-11364115 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 143, 66 |
| Conread position: | 205-380 |
| Cow position: | chr9:46226920-46227099 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 14, 68 |
| Conread position: | 205-400 |
| Cow position: | chr9:48133778-48133964 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 94, 68 |
| Conread position: | 205-426 |
| Cow position: | chr9:41652837-41653058 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 10, 21 |
| Conread position: | 205-447 |
| Cow position: | chr9:60037705-60037945 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 170, 67 |
| Conread position: | 205-450 |
| Cow position: | chr9:17310510-17310269 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 71, 6 |
| Conread position: | 205-454 |
| Cow position: | chr9:14961002-14961245 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 147, 70 |
| Conread position: | 205-454 |
| Cow position: | chr9:27052286-27052036 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 189 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 149, 83 |
| Conread position: | 205-508 |
| Cow position: | chr9:2113953-2113659 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 44 |
| Conread position: | 205-600 |
| Cow position: | chr9:30189149-30189559 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 20 |
| Conread position: | 205-655 |
| Cow position: | chr9:54528563-54529008 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 74 |
| Conread position: | 205-666 |
| Cow position: | chr9:18110815-18110356 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 57 |
| Conread position: | 205-666 |
| Cow position: | chr9:56861060-56861514 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 18 |
| Conread position: | 205-716 |
| Cow position: | chr9:5509775-5510281 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 46 |
| Conread position: | 205-719 |
| Cow position: | chr9:11299639-11299131 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 53 |
| Conread position: | 205-719 |
| Cow position: | chr9:26556152-26555640 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 52 |
| Conread position: | 205-719 |
| Cow position: | chr9:35904694-35904194 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 70 |
| Conread position: | 206-636 |
| Cow position: | chr9:62763251-62763668 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 54 |
| Conread position: | 208-453 |
| Cow position: | chr9:24850296-24850539 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 8, 56 |
| Conread position: | 208-454 |
| Cow position: | chr9:50295971-50295727 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 134, 10 |
| Conread position: | 208-719 |
| Cow position: | chr9:9200667-9200163 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 18 |
| Conread position: | 209-425 |
| Cow position: | chr9:34286858-34287062 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 209-431 |
| Cow position: | chr9:32625063-32625270 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 210-488 |
| Cow position: | chr9:53413191-53412919 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 144, 58 |
| Conread position: | 210-539 |
| Cow position: | chr9:34957996-34957670 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 49 |
| Conread position: | 211-432 |
| Cow position: | chr9:4128727-4128508 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 12, 49 |
| Conread position: | 211-454 |
| Cow position: | chr9:55084239-55084000 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 146, 14 |
| Conread position: | 211-491 |
| Cow position: | chr9:44217822-44218095 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 12 |
| Conread position: | 211-542 |
| Cow position: | chr9:18002894-18002567 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 73 |
| Conread position: | 211-719 |
| Cow position: | chr9:21462809-21462279 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 227 |
| Conread position: | 212-433 |
| Cow position: | chr9:20839675-20839891 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 30 |
| Conread position: | 212-445 |
| Cow position: | chr9:41781955-41782183 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 145, 67 |
| Conread position: | 212-447 |
| Cow position: | chr9:24887257-24887485 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 58 |
| Conread position: | 212-470 |
| Cow position: | chr9:55256492-55256237 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 134, 47 |
| Conread position: | 212-557 |
| Cow position: | chr9:43814503-43814840 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 46 |
| Conread position: | 213-357 |
| Cow position: | chr9:46242208-46242065 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 213-419 |
| Cow position: | chr9:29108597-29108799 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 144, 50 |
| Conread position: | 213-443 |
| Cow position: | chr9:5029572-5029801 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 83 |
| Conread position: | 213-453 |
| Cow position: | chr9:11102755-11102527 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 88, 55 |
| Conread position: | 213-453 |
| Cow position: | chr9:51311728-51311966 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 144, 59 |
| Conread position: | 213-613 |
| Cow position: | chr9:14184724-14185146 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 59 |
| Conread position: | 213-719 |
| Cow position: | chr9:5500917-5501399 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 56 |
| Conread position: | 213-719 |
| Cow position: | chr9:8600388-8600924 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 59 |
| Conread position: | 213-719 |
| Cow position: | chr9:32812404-32812894 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 21 |
| Conread position: | 213-719 |
| Cow position: | chr9:38546474-38546964 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 59 |
| Conread position: | 214-386 |
| Cow position: | chr9:32817078-32816905 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 90, 53 |
| Conread position: | 214-432 |
| Cow position: | chr9:19637575-19637364 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 124, 59 |
| Conread position: | 214-436 |
| Cow position: | chr9:17806056-17806273 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 143, 57 |
| Conread position: | 214-543 |
| Cow position: | chr9:3169458-3169133 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 34 |
| Conread position: | 214-612 |
| Cow position: | chr9:22433879-22433490 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 78 |
| Conread position: | 214-689 |
| Cow position: | chr9:8997611-8998086 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 10 |
| Conread position: | 214-719 |
| Cow position: | chr9:8950967-8951467 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 54 |
| Conread position: | 214-719 |
| Cow position: | chr9:19382389-19382896 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 35 |
| Conread position: | 217-363 |
| Cow position: | chr9:32847951-32848097 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 25, 73 |
| Conread position: | 217-418 |
| Cow position: | chr9:44552805-44553008 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 159 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 55, 80 |
| Conread position: | 217-429 |
| Cow position: | chr9:58853575-58853788 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 24, 51 |
| Conread position: | 217-625 |
| Cow position: | chr9:44108766-44108361 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 53 |
| Conread position: | 217-663 |
| Cow position: | chr9:25469103-25469516 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 51 |
| Conread position: | 217-714 |
| Cow position: | chr9:4928691-4929176 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 52 |
| Conread position: | 217-716 |
| Cow position: | chr9:2597617-2597122 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 78 |
| Conread position: | 217-719 |
| Cow position: | chr9:8612345-8612862 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 55 |
| Conread position: | 218-436 |
| Cow position: | chr9:1751402-1751614 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 139, 45 |
| Conread position: | 218-436 |
| Cow position: | chr9:2910188-2910397 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 129, 53 |
| Conread position: | 218-437 |
| Cow position: | chr9:51620502-51620715 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 139, 54 |
| Conread position: | 218-444 |
| Cow position: | chr9:8288682-8288904 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 84, 51 |
| Conread position: | 218-445 |
| Cow position: | chr9:3070356-3070135 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 139, 61 |
| Conread position: | 218-446 |
| Cow position: | chr9:31588035-31587808 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 127, 68 |
| Conread position: | 218-486 |
| Cow position: | chr9:22228018-22227756 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 66, 50 |
| Conread position: | 218-520 |
| Cow position: | chr9:33218885-33218590 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 213 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 139, 45 |
| Conread position: | 218-523 |
| Cow position: | chr9:5433702-5433997 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 57 |
| Conread position: | 218-689 |
| Cow position: | chr9:34093370-34092876 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 194 |
| Conread position: | 218-700 |
| Cow position: | chr9:7409842-7410320 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 57 |
| Conread position: | 218-700 |
| Cow position: | chr9:36445693-36446166 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 50 |
| Conread position: | 218-719 |
| Cow position: | chr9:1520673-1520169 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 57 |
| Conread position: | 220-453 |
| Cow position: | chr9:56747078-56746839 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 220-557 |
| Cow position: | chr9:63745877-63746202 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 235 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 137, 55 |
| Conread position: | 221-639 |
| Cow position: | chr9:38385801-38385392 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 22 |
| Conread position: | 221-717 |
| Cow position: | chr9:3724995-3724515 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 51 |
| Conread position: | 221-717 |
| Cow position: | chr9:9723817-9723326 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 39 |
| Conread position: | 224-459 |
| Cow position: | chr9:16745746-16745976 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 130, 47 |
| Conread position: | 225-459 |
| Cow position: | chr9:36066980-36067207 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 132, 53 |
| Conread position: | 225-655 |
| Cow position: | chr9:41789356-41789793 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 46 |
| Conread position: | 225-709 |
| Cow position: | chr9:44467279-44466803 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 10 |
| Conread position: | 225-719 |
| Cow position: | chr9:9490864-9491345 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 26 |
| Conread position: | 225-719 |
| Cow position: | chr9:46316712-46316229 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 46 |
| Conread position: | 230-502 |
| Cow position: | chr9:5442068-5442334 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 89, 33 |
| Conread position: | 230-714 |
| Cow position: | chr9:22361092-22361569 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 42 |
| Conread position: | 232-582 |
| Cow position: | chr9:3594452-3594103 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 38 |
| Conread position: | 238-429 |
| Cow position: | chr9:55118164-55118350 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 126, 31 |
| Conread position: | 240-719 |
| Cow position: | chr9:17740861-17740388 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 22 |
| Conread position: | 253-634 |
| Cow position: | chr9:11870301-11870689 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 47 |
| Conread position: | 261-532 |
| Cow position: | chr9:41485894-41485644 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 10, 31 |
| Conread position: | 268-453 |
| Cow position: | chr9:55364999-55365185 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 43, 60 |
| Conread position: | 268-469 |
| Cow position: | chr9:1350337-1350134 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 78, 59 |
| Conread position: | 268-718 |
| Cow position: | chr9:33823208-33823668 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 136 |
| Conread position: | 271-445 |
| Cow position: | chr9:38692429-38692250 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 276-619 |
| Cow position: | chr9:11849627-11849982 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 101 |
| Conread position: | 277-719 |
| Cow position: | chr9:19267045-19266589 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 145 |
Show alignments to all cow chromosomes.