Cow genome map

Conread name: Ova1-OVRM10095B10

Conread position: 1-289
Cow position: chr1:28175608-28175323 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 35

Conread position: 1-293
Cow position: chr1:101796268-101796551 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 34

Conread position: 1-359
Cow position: chr1:57948657-57949020 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 34

Conread position: 1-387
Cow position: chr1:22241325-22241713 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 34

Conread position: 1-432
Cow position: chr1:72036699-72036276 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 34

Conread position: 1-467
Cow position: chr1:21995416-21994945 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 34

Conread position: 1-468
Cow position: chr1:72113599-72114056 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 34

Conread position: 1-622
Cow position: chr1:72184269-72183654 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 34

Conread position: 1-693
Cow position: chr1:76877628-76878327 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 9

Conread position: 1-699
Cow position: chr1:5504534-5505240 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 34

Conread position: 1-699
Cow position: chr1:91104636-91105343 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 34

Conread position: 1-710
Cow position: chr1:33548806-33548089 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 34

Conread position: 1-715
Cow position: chr1:29902589-29901878 (view UCSC Genome Browser custom track)
Alignm length: 729
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 34

Conread position: 1-716
Cow position: chr1:79633958-79633234 (view UCSC Genome Browser custom track)
Alignm length: 730
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 34

Conread position: 1-717
Cow position: chr1:28875685-28876416 (view UCSC Genome Browser custom track)
Alignm length: 735
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 34

Conread position: 1-717
Cow position: chr1:30532426-30531704 (view UCSC Genome Browser custom track)
Alignm length: 736
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 29

Conread position: 1-717
Cow position: chr1:31363504-31362794 (view UCSC Genome Browser custom track)
Alignm length: 730
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 34

Conread position: 1-717
Cow position: chr1:69405751-69406477 (view UCSC Genome Browser custom track)
Alignm length: 730
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 34

Conread position: 1-717
Cow position: chr1:76618876-76618155 (view UCSC Genome Browser custom track)
Alignm length: 730
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 34

Conread position: 1-717
Cow position: chr1:82921556-82920820 (view UCSC Genome Browser custom track)
Alignm length: 743
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 34

Conread position: 1-717
Cow position: chr1:90912423-90913148 (view UCSC Genome Browser custom track)
Alignm length: 730
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 34

Conread position: 1-717
Cow position: chr1:100708665-100709390 (view UCSC Genome Browser custom track)
Alignm length: 730
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 34

Conread position: 1-723
Cow position: chr1:53310038-53309335 (view UCSC Genome Browser custom track)
Alignm length: 734
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 34

Conread position: 1-726
Cow position: chr1:82863410-82864148 (view UCSC Genome Browser custom track)
Alignm length: 746
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 34

Conread position: 1-729
Cow position: chr1:101832998-101833727 (view UCSC Genome Browser custom track)
Alignm length: 746
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 34

Conread position: 2-340
Cow position: chr1:21224723-21224379 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 11

Conread position: 4-342
Cow position: chr1:16273157-16273499 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 31

Conread position: 5-456
Cow position: chr1:29608503-29608044 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 30

Conread position: 14-375
Cow position: chr1:101854511-101854142 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 21

Conread position: 24-288
Cow position: chr1:18763698-18763436 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 185
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 145, 11

Conread position: 24-289
Cow position: chr1:79480362-79480099 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 182
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 146, 11

Conread position: 26-459
Cow position: chr1:22760643-22761067 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 9

Conread position: 26-552
Cow position: chr1:31317869-31317340 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 9

Conread position: 26-699
Cow position: chr1:63045503-63046186 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 10

Conread position: 65-699
Cow position: chr1:55779528-55780172 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 370

Conread position: 75-462
Cow position: chr1:55328745-55328355 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 50

Conread position: 89-290
Cow position: chr1:73403370-73403568 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 80, 16

Conread position: 89-439
Cow position: chr1:52356588-52356230 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 346

Conread position: 89-715
Cow position: chr1:18025130-18024503 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 347

Conread position: 98-469
Cow position: chr1:88532548-88532180 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 261
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 194, 83

Conread position: 105-715
Cow position: chr1:56745572-56746201 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 43

Conread position: 105-717
Cow position: chr1:66490278-66490900 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 145

Conread position: 105-717
Cow position: chr1:88178553-88179177 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 331

Conread position: 112-726
Cow position: chr1:12802785-12803418 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 470

Conread position: 190-377
Cow position: chr1:28564894-28564703 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 89, 16

Conread position: 211-717
Cow position: chr1:52172006-52171479 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 223

Conread position: 215-456
Cow position: chr1:48411559-48411806 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 179
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 74, 207

Conread position: 220-610
Cow position: chr1:95766477-95766081 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 266
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 81, 183

Conread position: 288-642
Cow position: chr1:10033398-10033755 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 138

Conread position: 342-726
Cow position: chr1:99572614-99572239 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 39

Conread position: 351-718
Cow position: chr1:45005920-45006294 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 39

Conread position: 364-717
Cow position: chr1:11854988-11854625 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 65

Conread position: 425-717
Cow position: chr1:71791946-71792249 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 216
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 11, 0

Conread position: 448-714
Cow position: chr1:88027876-88028141 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 26

Conread position: 526-715
Cow position: chr1:43449374-43449195 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 182, 6

Conread position: 530-717
Cow position: chr1:22629708-22629514 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 59, 44

Conread position: 559-720
Cow position: chr1:57946103-57946265 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 29, 15

Show alignments to all cow chromosomes.