Cow genome map
Conread name: | Ova1-OVRM10095B10 |
Conread position: | 1-289 |
Cow position: | chr1:28175608-28175323 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 35 |
Conread position: | 1-293 |
Cow position: | chr1:101796268-101796551 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 190, 34 |
Conread position: | 1-359 |
Cow position: | chr1:57948657-57949020 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 190, 34 |
Conread position: | 1-387 |
Cow position: | chr1:22241325-22241713 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 34 |
Conread position: | 1-432 |
Cow position: | chr1:72036699-72036276 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 190, 34 |
Conread position: | 1-467 |
Cow position: | chr1:21995416-21994945 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 277, 34 |
Conread position: | 1-468 |
Cow position: | chr1:72113599-72114056 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 34 |
Conread position: | 1-622 |
Cow position: | chr1:72184269-72183654 (view UCSC Genome Browser custom track) |
Alignm length: | 634 |
Alignm identity: | 480 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 277, 34 |
Conread position: | 1-693 |
Cow position: | chr1:76877628-76878327 (view UCSC Genome Browser custom track) |
Alignm length: | 705 |
Alignm identity: | 535 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 9 |
Conread position: | 1-699 |
Cow position: | chr1:5504534-5505240 (view UCSC Genome Browser custom track) |
Alignm length: | 714 |
Alignm identity: | 544 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 34 |
Conread position: | 1-699 |
Cow position: | chr1:91104636-91105343 (view UCSC Genome Browser custom track) |
Alignm length: | 711 |
Alignm identity: | 549 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 34 |
Conread position: | 1-710 |
Cow position: | chr1:33548806-33548089 (view UCSC Genome Browser custom track) |
Alignm length: | 725 |
Alignm identity: | 536 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 34 |
Conread position: | 1-715 |
Cow position: | chr1:29902589-29901878 (view UCSC Genome Browser custom track) |
Alignm length: | 729 |
Alignm identity: | 531 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 190, 34 |
Conread position: | 1-716 |
Cow position: | chr1:79633958-79633234 (view UCSC Genome Browser custom track) |
Alignm length: | 730 |
Alignm identity: | 551 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 34 |
Conread position: | 1-717 |
Cow position: | chr1:28875685-28876416 (view UCSC Genome Browser custom track) |
Alignm length: | 735 |
Alignm identity: | 557 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 34 |
Conread position: | 1-717 |
Cow position: | chr1:30532426-30531704 (view UCSC Genome Browser custom track) |
Alignm length: | 736 |
Alignm identity: | 543 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 29 |
Conread position: | 1-717 |
Cow position: | chr1:31363504-31362794 (view UCSC Genome Browser custom track) |
Alignm length: | 730 |
Alignm identity: | 541 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 34 |
Conread position: | 1-717 |
Cow position: | chr1:69405751-69406477 (view UCSC Genome Browser custom track) |
Alignm length: | 730 |
Alignm identity: | 544 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 34 |
Conread position: | 1-717 |
Cow position: | chr1:76618876-76618155 (view UCSC Genome Browser custom track) |
Alignm length: | 730 |
Alignm identity: | 554 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 34 |
Conread position: | 1-717 |
Cow position: | chr1:82921556-82920820 (view UCSC Genome Browser custom track) |
Alignm length: | 743 |
Alignm identity: | 540 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 34 |
Conread position: | 1-717 |
Cow position: | chr1:90912423-90913148 (view UCSC Genome Browser custom track) |
Alignm length: | 730 |
Alignm identity: | 534 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 34 |
Conread position: | 1-717 |
Cow position: | chr1:100708665-100709390 (view UCSC Genome Browser custom track) |
Alignm length: | 730 |
Alignm identity: | 552 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 34 |
Conread position: | 1-723 |
Cow position: | chr1:53310038-53309335 (view UCSC Genome Browser custom track) |
Alignm length: | 734 |
Alignm identity: | 556 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 34 |
Conread position: | 1-726 |
Cow position: | chr1:82863410-82864148 (view UCSC Genome Browser custom track) |
Alignm length: | 746 |
Alignm identity: | 516 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 190, 34 |
Conread position: | 1-729 |
Cow position: | chr1:101832998-101833727 (view UCSC Genome Browser custom track) |
Alignm length: | 746 |
Alignm identity: | 553 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 105, 34 |
Conread position: | 2-340 |
Cow position: | chr1:21224723-21224379 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 158, 11 |
Conread position: | 4-342 |
Cow position: | chr1:16273157-16273499 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 31 |
Conread position: | 5-456 |
Cow position: | chr1:29608503-29608044 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 30 |
Conread position: | 14-375 |
Cow position: | chr1:101854511-101854142 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 21 |
Conread position: | 24-288 |
Cow position: | chr1:18763698-18763436 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 185 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 145, 11 |
Conread position: | 24-289 |
Cow position: | chr1:79480362-79480099 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 182 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 146, 11 |
Conread position: | 26-459 |
Cow position: | chr1:22760643-22761067 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 9 |
Conread position: | 26-552 |
Cow position: | chr1:31317869-31317340 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 154, 9 |
Conread position: | 26-699 |
Cow position: | chr1:63045503-63046186 (view UCSC Genome Browser custom track) |
Alignm length: | 688 |
Alignm identity: | 475 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 10 |
Conread position: | 65-699 |
Cow position: | chr1:55779528-55780172 (view UCSC Genome Browser custom track) |
Alignm length: | 647 |
Alignm identity: | 487 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 125, 370 |
Conread position: | 75-462 |
Cow position: | chr1:55328745-55328355 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 50 |
Conread position: | 89-290 |
Cow position: | chr1:73403370-73403568 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 149 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 80, 16 |
Conread position: | 89-439 |
Cow position: | chr1:52356588-52356230 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 346 |
Conread position: | 89-715 |
Cow position: | chr1:18025130-18024503 (view UCSC Genome Browser custom track) |
Alignm length: | 654 |
Alignm identity: | 486 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 347 |
Conread position: | 98-469 |
Cow position: | chr1:88532548-88532180 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 261 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 194, 83 |
Conread position: | 105-715 |
Cow position: | chr1:56745572-56746201 (view UCSC Genome Browser custom track) |
Alignm length: | 642 |
Alignm identity: | 452 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 43 |
Conread position: | 105-717 |
Cow position: | chr1:66490278-66490900 (view UCSC Genome Browser custom track) |
Alignm length: | 627 |
Alignm identity: | 467 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 145 |
Conread position: | 105-717 |
Cow position: | chr1:88178553-88179177 (view UCSC Genome Browser custom track) |
Alignm length: | 627 |
Alignm identity: | 474 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 331 |
Conread position: | 112-726 |
Cow position: | chr1:12802785-12803418 (view UCSC Genome Browser custom track) |
Alignm length: | 638 |
Alignm identity: | 483 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 470 |
Conread position: | 190-377 |
Cow position: | chr1:28564894-28564703 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 146 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 89, 16 |
Conread position: | 211-717 |
Cow position: | chr1:52172006-52171479 (view UCSC Genome Browser custom track) |
Alignm length: | 532 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 223 |
Conread position: | 215-456 |
Cow position: | chr1:48411559-48411806 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 179 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 74, 207 |
Conread position: | 220-610 |
Cow position: | chr1:95766477-95766081 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 266 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 81, 183 |
Conread position: | 288-642 |
Cow position: | chr1:10033398-10033755 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 168, 138 |
Conread position: | 342-726 |
Cow position: | chr1:99572614-99572239 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 39 |
Conread position: | 351-718 |
Cow position: | chr1:45005920-45006294 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 39 |
Conread position: | 364-717 |
Cow position: | chr1:11854988-11854625 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 65 |
Conread position: | 425-717 |
Cow position: | chr1:71791946-71792249 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 216 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 448-714 |
Cow position: | chr1:88027876-88028141 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 26 |
Conread position: | 526-715 |
Cow position: | chr1:43449374-43449195 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 139 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 182, 6 |
Conread position: | 530-717 |
Cow position: | chr1:22629708-22629514 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 145 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 59, 44 |
Conread position: | 559-720 |
Cow position: | chr1:57946103-57946265 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 125 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 29, 15 |
Show alignments to all cow chromosomes.