Cow genome map

Conread name: Ova1-OVRM10095B10

Conread position: 1-456
Cow position: chr16:20968941-20968480 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 36

Conread position: 1-619
Cow position: chr16:16268036-16267413 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 36

Conread position: 1-686
Cow position: chr16:41164902-41164219 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 34

Conread position: 1-691
Cow position: chr16:41033161-41033856 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 34

Conread position: 1-710
Cow position: chr16:7466471-7467188 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 34

Conread position: 1-710
Cow position: chr16:12161421-12160707 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 35

Conread position: 1-710
Cow position: chr16:25443734-25444452 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 34

Conread position: 1-710
Cow position: chr16:25455604-25454885 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 34

Conread position: 1-710
Cow position: chr16:43895405-43894686 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 34

Conread position: 1-711
Cow position: chr16:8814246-8813526 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 307

Conread position: 1-715
Cow position: chr16:49254375-49253664 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 9

Conread position: 1-717
Cow position: chr16:416753-417478 (view UCSC Genome Browser custom track)
Alignm length: 730
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 34

Conread position: 1-717
Cow position: chr16:26665574-26666287 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 34

Conread position: 1-717
Cow position: chr16:27731524-27730798 (view UCSC Genome Browser custom track)
Alignm length: 730
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 34

Conread position: 1-717
Cow position: chr16:51086640-51087366 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 34

Conread position: 1-718
Cow position: chr16:28168460-28167734 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 34

Conread position: 2-717
Cow position: chr16:4462467-4461729 (view UCSC Genome Browser custom track)
Alignm length: 744
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 33

Conread position: 4-715
Cow position: chr16:3331771-3332484 (view UCSC Genome Browser custom track)
Alignm length: 728
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 31

Conread position: 5-714
Cow position: chr16:29157519-29158201 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 32

Conread position: 10-717
Cow position: chr16:25087477-25088192 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 25

Conread position: 10-717
Cow position: chr16:45704924-45704212 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 15

Conread position: 13-289
Cow position: chr16:55866595-55866869 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 22

Conread position: 35-380
Cow position: chr16:5655064-5655403 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 5

Conread position: 49-718
Cow position: chr16:8804250-8804942 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 210

Conread position: 60-693
Cow position: chr16:4755941-4756583 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 132

Conread position: 65-716
Cow position: chr16:3819285-3819948 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 369

Conread position: 65-717
Cow position: chr16:50713496-50712856 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 246

Conread position: 65-726
Cow position: chr16:18695046-18694381 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 128

Conread position: 94-687
Cow position: chr16:10966284-10965692 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 328

Conread position: 104-716
Cow position: chr16:193974-193355 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 162

Conread position: 189-689
Cow position: chr16:15178734-15179227 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 205

Conread position: 228-725
Cow position: chr16:42080524-42080026 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 204

Conread position: 248-505
Cow position: chr16:18687318-18687056 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 153
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 41, 88

Conread position: 288-699
Cow position: chr16:43563240-43562830 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 101

Conread position: 288-699
Cow position: chr16:54180201-54179799 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 126

Conread position: 304-717
Cow position: chr16:4973354-4972942 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 121

Conread position: 323-715
Cow position: chr16:7154789-7155185 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 91

Conread position: 342-717
Cow position: chr16:45608622-45608998 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 6

Conread position: 369-716
Cow position: chr16:27105593-27105938 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 225
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 89, 57

Conread position: 383-715
Cow position: chr16:49170721-49170403 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 46

Conread position: 445-717
Cow position: chr16:1958415-1958144 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 201
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 11, 134

Conread position: 524-717
Cow position: chr16:41805053-41804863 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 52

Conread position: 530-715
Cow position: chr16:49127295-49127110 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 68, 30

Conread position: 555-726
Cow position: chr16:7457563-7457391 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 44, 19

Show alignments to all cow chromosomes.