Cow genome map
| Conread name: | Ova1-OVRM10095B10 |
| Conread position: | 1-355 |
| Cow position: | chr3:40005418-40005060 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 34 |
| Conread position: | 1-456 |
| Cow position: | chr3:35619057-35619518 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 33 |
| Conread position: | 1-512 |
| Cow position: | chr3:14862677-14863209 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 34 |
| Conread position: | 1-642 |
| Cow position: | chr3:41208124-41207475 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 34 |
| Conread position: | 1-693 |
| Cow position: | chr3:77581090-77581770 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 34 |
| Conread position: | 1-699 |
| Cow position: | chr3:30320735-30321435 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 34 |
| Conread position: | 1-699 |
| Cow position: | chr3:57482252-57481558 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 34 |
| Conread position: | 1-699 |
| Cow position: | chr3:68718235-68717531 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 539 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 34 |
| Conread position: | 1-715 |
| Cow position: | chr3:11510367-11509654 (view UCSC Genome Browser custom track) |
| Alignm length: | 736 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 34 |
| Conread position: | 1-716 |
| Cow position: | chr3:6688285-6689023 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 549 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 34 |
| Conread position: | 1-717 |
| Cow position: | chr3:7246632-7245909 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 549 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 34 |
| Conread position: | 1-717 |
| Cow position: | chr3:10243125-10243856 (view UCSC Genome Browser custom track) |
| Alignm length: | 735 |
| Alignm identity: | 546 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 64 |
| Conread position: | 1-717 |
| Cow position: | chr3:21004287-21005008 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 555 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 34 |
| Conread position: | 1-717 |
| Cow position: | chr3:22725297-22724575 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 28 |
| Conread position: | 1-717 |
| Cow position: | chr3:40825869-40826593 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 553 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 34 |
| Conread position: | 1-717 |
| Cow position: | chr3:78024961-78024239 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 549 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 34 |
| Conread position: | 1-726 |
| Cow position: | chr3:24586772-24586026 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 560 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 34 |
| Conread position: | 1-726 |
| Cow position: | chr3:49335675-49336400 (view UCSC Genome Browser custom track) |
| Alignm length: | 736 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 12 |
| Conread position: | 3-717 |
| Cow position: | chr3:75039372-75038645 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 566 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 32 |
| Conread position: | 10-507 |
| Cow position: | chr3:59864035-59864539 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 25 |
| Conread position: | 10-580 |
| Cow position: | chr3:79592620-79593202 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 25 |
| Conread position: | 10-718 |
| Cow position: | chr3:29324636-29325338 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 25 |
| Conread position: | 13-645 |
| Cow position: | chr3:29581149-29581787 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 22 |
| Conread position: | 13-699 |
| Cow position: | chr3:53048296-53047614 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 22 |
| Conread position: | 14-290 |
| Cow position: | chr3:52510747-52511017 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 85, 8 |
| Conread position: | 31-468 |
| Cow position: | chr3:6441152-6441609 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 53 |
| Conread position: | 37-392 |
| Cow position: | chr3:3938345-3938713 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 51-290 |
| Cow position: | chr3:64735977-64735741 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 178 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 140, 8 |
| Conread position: | 65-699 |
| Cow position: | chr3:76001419-76000784 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 61 |
| Conread position: | 65-717 |
| Cow position: | chr3:36875514-36874864 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 105 |
| Conread position: | 65-717 |
| Cow position: | chr3:46505302-46505965 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 369 |
| Conread position: | 65-717 |
| Cow position: | chr3:56645797-56645134 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 353 |
| Conread position: | 65-724 |
| Cow position: | chr3:34087657-34086996 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 265 |
| Conread position: | 74-693 |
| Cow position: | chr3:32837892-32838529 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 356 |
| Conread position: | 88-717 |
| Cow position: | chr3:6864224-6864855 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 347 |
| Conread position: | 97-717 |
| Cow position: | chr3:40285750-40285119 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 338 |
| Conread position: | 99-717 |
| Cow position: | chr3:61677117-61677732 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 15 |
| Conread position: | 117-712 |
| Cow position: | chr3:32220327-32220916 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 117-715 |
| Cow position: | chr3:57554355-57554969 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 291 |
| Conread position: | 126-726 |
| Cow position: | chr3:50460944-50461527 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 308 |
| Conread position: | 147-717 |
| Cow position: | chr3:49463936-49463363 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 286 |
| Conread position: | 181-671 |
| Cow position: | chr3:51489971-51490453 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 310 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 107, 252 |
| Conread position: | 209-617 |
| Cow position: | chr3:53518515-53518929 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 225 |
| Conread position: | 217-670 |
| Cow position: | chr3:522808-523258 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 216 |
| Conread position: | 288-715 |
| Cow position: | chr3:58034879-58034442 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 145 |
| Conread position: | 288-717 |
| Cow position: | chr3:54654415-54653978 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 142 |
| Conread position: | 304-717 |
| Cow position: | chr3:58950245-58950658 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 46 |
| Conread position: | 427-726 |
| Cow position: | chr3:6854714-6854422 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 221 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 31, 59 |
| Conread position: | 444-717 |
| Cow position: | chr3:31224200-31224475 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 130 |
| Conread position: | 471-717 |
| Cow position: | chr3:36671672-36671423 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 185 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 128, 103 |
| Conread position: | 478-729 |
| Cow position: | chr3:49732839-49732588 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 97 |
| Conread position: | 493-714 |
| Cow position: | chr3:12667677-12667897 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 95, 14 |
| Conread position: | 538-717 |
| Cow position: | chr3:40004463-40004289 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 539-717 |
| Cow position: | chr3:36571158-36571337 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 49, 35 |
| Conread position: | 556-717 |
| Cow position: | chr3:14558611-14558441 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 43, 18 |
| Conread position: | 567-715 |
| Cow position: | chr3:36402868-36403019 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 595-716 |
| Cow position: | chr3:13117978-13117859 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
Show alignments to all cow chromosomes.