Cow genome map

Conread name: Ova1-OVRM10095B10

Conread position: 1-289
Cow position: chr6:15179727-15180005 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 34, 0

Conread position: 1-400
Cow position: chr6:27527471-27527065 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 34

Conread position: 1-424
Cow position: chr6:39435406-39434970 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 34

Conread position: 1-455
Cow position: chr6:51895564-51895110 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 34

Conread position: 1-691
Cow position: chr6:33950652-33949946 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 351

Conread position: 1-691
Cow position: chr6:47040683-47039994 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 34

Conread position: 1-698
Cow position: chr6:47849393-47848686 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 32

Conread position: 1-699
Cow position: chr6:328844-328140 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 34

Conread position: 1-699
Cow position: chr6:916560-917266 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 34

Conread position: 1-699
Cow position: chr6:26668509-26667801 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 34

Conread position: 1-717
Cow position: chr6:9734437-9733730 (view UCSC Genome Browser custom track)
Alignm length: 734
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 35

Conread position: 1-717
Cow position: chr6:16767319-16766599 (view UCSC Genome Browser custom track)
Alignm length: 730
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 34

Conread position: 1-721
Cow position: chr6:53936111-53935390 (view UCSC Genome Browser custom track)
Alignm length: 742
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 34

Conread position: 1-726
Cow position: chr6:2580935-2581650 (view UCSC Genome Browser custom track)
Alignm length: 743
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 34

Conread position: 4-293
Cow position: chr6:38274090-38274379 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 31

Conread position: 10-293
Cow position: chr6:30318230-30317959 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 212
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 57, 25

Conread position: 10-717
Cow position: chr6:59595776-59596482 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 25

Conread position: 14-499
Cow position: chr6:64252152-64251669 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 15

Conread position: 14-693
Cow position: chr6:40158973-40158300 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 21

Conread position: 15-729
Cow position: chr6:16704197-16703486 (view UCSC Genome Browser custom track)
Alignm length: 736
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 20

Conread position: 22-717
Cow position: chr6:41231023-41231729 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 193

Conread position: 23-690
Cow position: chr6:58952583-58951910 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 13

Conread position: 30-721
Cow position: chr6:6120451-6119745 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 423

Conread position: 50-584
Cow position: chr6:51876393-51876928 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 140

Conread position: 65-717
Cow position: chr6:43186680-43187350 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 111

Conread position: 68-586
Cow position: chr6:43778107-43778626 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 45

Conread position: 74-715
Cow position: chr6:4904386-4903757 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 40

Conread position: 87-289
Cow position: chr6:29281894-29282088 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 103, 12

Conread position: 92-717
Cow position: chr6:2367627-2367020 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 201

Conread position: 105-712
Cow position: chr6:3015484-3016078 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 302

Conread position: 105-716
Cow position: chr6:11354549-11353940 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 325

Conread position: 109-715
Cow position: chr6:30270281-30269664 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 326

Conread position: 111-715
Cow position: chr6:12351453-12352080 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 210

Conread position: 120-587
Cow position: chr6:6474804-6474339 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 237

Conread position: 127-387
Cow position: chr6:18963963-18963694 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 64, 0

Conread position: 148-596
Cow position: chr6:14065105-14065561 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 242

Conread position: 186-699
Cow position: chr6:50486075-50485561 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 250

Conread position: 190-398
Cow position: chr6:40759154-40759365 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 90, 56

Conread position: 199-715
Cow position: chr6:365604-366129 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 212

Conread position: 202-688
Cow position: chr6:1888719-1888236 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 63

Conread position: 288-718
Cow position: chr6:14950856-14950410 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 222

Conread position: 350-724
Cow position: chr6:28550189-28549807 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 75

Conread position: 460-726
Cow position: chr6:2618581-2618317 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 63

Conread position: 525-717
Cow position: chr6:39136549-39136745 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 68, 49

Conread position: 541-717
Cow position: chr6:13314966-13314789 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 47, 33

Show alignments to all cow chromosomes.