Cow genome map
| Conread name: | Ova1-OVRM10095B10 |
| Conread position: | 1-289 |
| Cow position: | chr6:15179727-15180005 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1-400 |
| Cow position: | chr6:27527471-27527065 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 34 |
| Conread position: | 1-424 |
| Cow position: | chr6:39435406-39434970 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 34 |
| Conread position: | 1-455 |
| Cow position: | chr6:51895564-51895110 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 291, 34 |
| Conread position: | 1-691 |
| Cow position: | chr6:33950652-33949946 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 351 |
| Conread position: | 1-691 |
| Cow position: | chr6:47040683-47039994 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 34 |
| Conread position: | 1-698 |
| Cow position: | chr6:47849393-47848686 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 32 |
| Conread position: | 1-699 |
| Cow position: | chr6:328844-328140 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 34 |
| Conread position: | 1-699 |
| Cow position: | chr6:916560-917266 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 546 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 34 |
| Conread position: | 1-699 |
| Cow position: | chr6:26668509-26667801 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 546 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 34 |
| Conread position: | 1-717 |
| Cow position: | chr6:9734437-9733730 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 35 |
| Conread position: | 1-717 |
| Cow position: | chr6:16767319-16766599 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 562 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 34 |
| Conread position: | 1-721 |
| Cow position: | chr6:53936111-53935390 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 34 |
| Conread position: | 1-726 |
| Cow position: | chr6:2580935-2581650 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 542 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 34 |
| Conread position: | 4-293 |
| Cow position: | chr6:38274090-38274379 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 31 |
| Conread position: | 10-293 |
| Cow position: | chr6:30318230-30317959 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 212 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 57, 25 |
| Conread position: | 10-717 |
| Cow position: | chr6:59595776-59596482 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 25 |
| Conread position: | 14-499 |
| Cow position: | chr6:64252152-64251669 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 15 |
| Conread position: | 14-693 |
| Cow position: | chr6:40158973-40158300 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 21 |
| Conread position: | 15-729 |
| Cow position: | chr6:16704197-16703486 (view UCSC Genome Browser custom track) |
| Alignm length: | 736 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 20 |
| Conread position: | 22-717 |
| Cow position: | chr6:41231023-41231729 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 193 |
| Conread position: | 23-690 |
| Cow position: | chr6:58952583-58951910 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 13 |
| Conread position: | 30-721 |
| Cow position: | chr6:6120451-6119745 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 423 |
| Conread position: | 50-584 |
| Cow position: | chr6:51876393-51876928 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 140 |
| Conread position: | 65-717 |
| Cow position: | chr6:43186680-43187350 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 111 |
| Conread position: | 68-586 |
| Cow position: | chr6:43778107-43778626 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 45 |
| Conread position: | 74-715 |
| Cow position: | chr6:4904386-4903757 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 40 |
| Conread position: | 87-289 |
| Cow position: | chr6:29281894-29282088 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 103, 12 |
| Conread position: | 92-717 |
| Cow position: | chr6:2367627-2367020 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 201 |
| Conread position: | 105-712 |
| Cow position: | chr6:3015484-3016078 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 302 |
| Conread position: | 105-716 |
| Cow position: | chr6:11354549-11353940 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 325 |
| Conread position: | 109-715 |
| Cow position: | chr6:30270281-30269664 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 326 |
| Conread position: | 111-715 |
| Cow position: | chr6:12351453-12352080 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 210 |
| Conread position: | 120-587 |
| Cow position: | chr6:6474804-6474339 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 237 |
| Conread position: | 127-387 |
| Cow position: | chr6:18963963-18963694 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 148-596 |
| Cow position: | chr6:14065105-14065561 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 242 |
| Conread position: | 186-699 |
| Cow position: | chr6:50486075-50485561 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 250 |
| Conread position: | 190-398 |
| Cow position: | chr6:40759154-40759365 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 90, 56 |
| Conread position: | 199-715 |
| Cow position: | chr6:365604-366129 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 212 |
| Conread position: | 202-688 |
| Cow position: | chr6:1888719-1888236 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 63 |
| Conread position: | 288-718 |
| Cow position: | chr6:14950856-14950410 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 222 |
| Conread position: | 350-724 |
| Cow position: | chr6:28550189-28549807 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 75 |
| Conread position: | 460-726 |
| Cow position: | chr6:2618581-2618317 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 63 |
| Conread position: | 525-717 |
| Cow position: | chr6:39136549-39136745 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 68, 49 |
| Conread position: | 541-717 |
| Cow position: | chr6:13314966-13314789 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 47, 33 |
Show alignments to all cow chromosomes.