Cow genome map
| Conread name: | Ova1-OVRM10096A12 |
| Conread position: | 1-231 |
| Cow position: | chr12:28748978-28748741 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 87, 33 |
| Conread position: | 1-348 |
| Cow position: | chr12:44595773-44596135 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 87, 107 |
| Conread position: | 5-201 |
| Cow position: | chr12:18420503-18420304 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 83, 64 |
| Conread position: | 6-212 |
| Cow position: | chr12:23916874-23916664 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 82, 37 |
| Conread position: | 6-223 |
| Cow position: | chr12:11587806-11587578 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 6-303 |
| Cow position: | chr12:30661918-30662226 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 101 |
| Conread position: | 6-322 |
| Cow position: | chr12:9914821-9914494 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 82, 103 |
| Conread position: | 6-332 |
| Cow position: | chr12:6210126-6210462 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 98 |
| Conread position: | 6-342 |
| Cow position: | chr12:7978069-7977732 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 37 |
| Conread position: | 6-342 |
| Cow position: | chr12:15938234-15938582 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 249 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 82, 10 |
| Conread position: | 6-342 |
| Cow position: | chr12:29483854-29484206 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 45, 40 |
| Conread position: | 6-344 |
| Cow position: | chr12:29995432-29995779 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 243 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 82, 48 |
| Conread position: | 6-345 |
| Cow position: | chr12:33323464-33323816 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 82, 100 |
| Conread position: | 6-345 |
| Cow position: | chr12:42181097-42181459 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 256 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 82, 296 |
| Conread position: | 6-351 |
| Cow position: | chr12:15173855-15173495 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 242 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 82, 105 |
| Conread position: | 6-351 |
| Cow position: | chr12:21393738-21393374 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 242 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 92, 115 |
| Conread position: | 6-364 |
| Cow position: | chr12:8943192-8943565 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 44, 40 |
| Conread position: | 6-365 |
| Cow position: | chr12:42254699-42254322 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 83, 67 |
| Conread position: | 7-231 |
| Cow position: | chr12:30210514-30210285 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 7-276 |
| Cow position: | chr12:5635422-5635699 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 81, 97 |
| Conread position: | 7-294 |
| Cow position: | chr12:23574794-23574503 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 81, 154 |
| Conread position: | 7-305 |
| Cow position: | chr12:42879725-42879429 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 80, 109 |
| Conread position: | 7-312 |
| Cow position: | chr12:22285091-22285385 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 82, 99 |
| Conread position: | 7-324 |
| Cow position: | chr12:5906087-5905760 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 236 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 81, 108 |
| Conread position: | 7-324 |
| Cow position: | chr12:11836265-11835945 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 81, 157 |
| Conread position: | 7-324 |
| Cow position: | chr12:25805101-25805407 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 196, 62 |
| Conread position: | 7-326 |
| Cow position: | chr12:7000573-7000888 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 81, 9 |
| Conread position: | 7-334 |
| Cow position: | chr12:20479307-20479621 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 226 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 82, 38 |
| Conread position: | 7-341 |
| Cow position: | chr12:17080291-17079944 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 81, 284 |
| Conread position: | 7-342 |
| Cow position: | chr12:19664501-19664830 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 119, 83 |
| Conread position: | 7-344 |
| Cow position: | chr12:11056907-11056559 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 12, 159 |
| Conread position: | 7-348 |
| Cow position: | chr12:18943627-18943971 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 41, 71 |
| Conread position: | 7-348 |
| Cow position: | chr12:19869493-19869150 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 9 |
| Conread position: | 7-351 |
| Cow position: | chr12:18577870-18577522 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 107 |
| Conread position: | 7-351 |
| Cow position: | chr12:31228603-31228255 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 242 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 81, 281 |
| Conread position: | 7-351 |
| Cow position: | chr12:31429540-31429880 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 246 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 81, 53 |
| Conread position: | 7-351 |
| Cow position: | chr12:42967026-42966677 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 35 |
| Conread position: | 7-351 |
| Cow position: | chr12:47929231-47928887 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 182, 15 |
| Conread position: | 7-358 |
| Cow position: | chr12:34148330-34148682 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 196, 84 |
| Conread position: | 8-191 |
| Cow position: | chr12:6102798-6102983 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 80, 67 |
| Conread position: | 8-211 |
| Cow position: | chr12:35123919-35123715 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 80, 40 |
| Conread position: | 8-213 |
| Cow position: | chr12:4719977-4719766 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 85, 117 |
| Conread position: | 8-264 |
| Cow position: | chr12:22287303-22287039 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 80, 111 |
| Conread position: | 8-319 |
| Cow position: | chr12:11109784-11109478 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 127, 72 |
| Conread position: | 8-345 |
| Cow position: | chr12:35310656-35310990 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 244 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 85, 11 |
| Conread position: | 8-351 |
| Cow position: | chr12:9710178-9710529 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 243 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 79, 172 |
| Conread position: | 8-351 |
| Cow position: | chr12:46714401-46714068 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 80, 99 |
| Conread position: | 10-254 |
| Cow position: | chr12:12637155-12637409 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 10-286 |
| Cow position: | chr12:17774822-17774546 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 78, 88 |
| Conread position: | 10-321 |
| Cow position: | chr12:3950317-3950645 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 78, 286 |
| Conread position: | 10-333 |
| Cow position: | chr12:45820338-45820663 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 78, 158 |
| Conread position: | 10-334 |
| Cow position: | chr12:4866845-4866511 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 78, 102 |
| Conread position: | 13-234 |
| Cow position: | chr12:3906498-3906272 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 77, 41 |
| Conread position: | 13-320 |
| Cow position: | chr12:41474114-41473802 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 224 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 76, 126 |
| Conread position: | 13-328 |
| Cow position: | chr12:28582483-28582793 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 31 |
| Conread position: | 13-331 |
| Cow position: | chr12:6410709-6411034 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 97 |
| Conread position: | 13-342 |
| Cow position: | chr12:18550906-18550578 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 43, 33 |
| Conread position: | 13-342 |
| Cow position: | chr12:27803025-27803362 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 75, 152 |
| Conread position: | 13-346 |
| Cow position: | chr12:30753744-30753408 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 237 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 80, 25 |
| Conread position: | 13-359 |
| Cow position: | chr12:15531083-15530732 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 76, 91 |
| Conread position: | 16-191 |
| Cow position: | chr12:46120810-46120986 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 36, 90 |
| Conread position: | 16-324 |
| Cow position: | chr12:5714652-5714332 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 228 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 72, 276 |
| Conread position: | 16-325 |
| Cow position: | chr12:22882078-22881754 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 226 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 72, 189 |
| Conread position: | 16-351 |
| Cow position: | chr12:2711520-2711168 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 20, 32 |
| Conread position: | 18-314 |
| Cow position: | chr12:12178943-12178634 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 80, 116 |
| Conread position: | 23-351 |
| Cow position: | chr12:28010894-28011223 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 245 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 113, 16 |
| Conread position: | 25-324 |
| Cow position: | chr12:3955760-3956072 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 209 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 63, 70 |
| Conread position: | 25-369 |
| Cow position: | chr12:40910276-40910633 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 265 |
| Conread position: | 26-332 |
| Cow position: | chr12:17031627-17031316 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 62, 37 |
| Conread position: | 30-324 |
| Cow position: | chr12:26317473-26317162 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 58, 159 |
| Conread position: | 31-351 |
| Cow position: | chr12:27563370-27563701 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 236 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 62, 263 |
| Conread position: | 48-363 |
| Cow position: | chr12:3579276-3578943 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 32, 19 |
| Conread position: | 49-338 |
| Cow position: | chr12:30805842-30805543 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 223 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 39, 58 |
| Conread position: | 49-350 |
| Cow position: | chr12:44622344-44622034 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 44, 55 |
| Conread position: | 54-230 |
| Cow position: | chr12:30476464-30476285 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 34, 7 |
| Conread position: | 54-305 |
| Cow position: | chr12:44846372-44846115 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 76, 35 |
| Conread position: | 54-351 |
| Cow position: | chr12:2241905-2242213 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 42, 60 |
| Conread position: | 54-351 |
| Cow position: | chr12:8868893-8869206 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 56, 23 |
| Conread position: | 54-351 |
| Cow position: | chr12:36500964-36501271 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 91, 42 |
| Conread position: | 59-312 |
| Cow position: | chr12:41214342-41214603 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 29, 61 |
| Conread position: | 62-332 |
| Cow position: | chr12:25456095-25455809 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 26, 233 |
| Conread position: | 62-351 |
| Cow position: | chr12:28572663-28572379 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 213 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 26, 51 |
| Conread position: | 62-363 |
| Cow position: | chr12:28650933-28650618 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 25, 147 |
| Conread position: | 62-365 |
| Cow position: | chr12:37770853-37770532 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 63-230 |
| Cow position: | chr12:5639122-5638947 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 25, 88 |
| Conread position: | 65-334 |
| Cow position: | chr12:33458114-33457843 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 69, 10 |
| Conread position: | 65-351 |
| Cow position: | chr12:41581087-41580793 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 23, 37 |
| Conread position: | 66-333 |
| Cow position: | chr12:2670238-2669971 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 26, 173 |
| Conread position: | 67-330 |
| Cow position: | chr12:32391819-32391542 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 26, 40 |
| Conread position: | 87-347 |
| Cow position: | chr12:34473671-34473929 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 26, 16 |
| Conread position: | 87-353 |
| Cow position: | chr12:7919994-7919741 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 14, 40 |
| Conread position: | 92-351 |
| Cow position: | chr12:5800978-5800714 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 44, 11 |
| Conread position: | 93-322 |
| Cow position: | chr12:31532464-31532696 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 17, 58 |
| Conread position: | 95-316 |
| Cow position: | chr12:40110324-40110100 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 98, 13 |
| Conread position: | 96-351 |
| Cow position: | chr12:22260883-22261138 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 32, 8 |
| Conread position: | 98-348 |
| Cow position: | chr12:34385574-34385835 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 38, 22 |
| Conread position: | 103-365 |
| Cow position: | chr12:19420000-19420271 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 83, 39 |
| Conread position: | 106-351 |
| Cow position: | chr12:3039438-3039190 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 187 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 24, 176 |
| Conread position: | 107-308 |
| Cow position: | chr12:25320852-25320642 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 29, 13 |
| Conread position: | 108-324 |
| Cow position: | chr12:19715110-19715324 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 23, 76 |
| Conread position: | 108-337 |
| Cow position: | chr12:30919348-30919125 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 21, 80 |
| Conread position: | 108-351 |
| Cow position: | chr12:9413852-9414090 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 28, 99 |
| Conread position: | 109-330 |
| Cow position: | chr12:3510492-3510262 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 94, 17 |
| Conread position: | 109-348 |
| Cow position: | chr12:2805119-2805365 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 93, 33 |
| Conread position: | 112-276 |
| Cow position: | chr12:29161889-29162062 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 112-324 |
| Cow position: | chr12:29694120-29694334 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 19, 103 |
| Conread position: | 112-324 |
| Cow position: | chr12:40270166-40270383 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 24, 143 |
| Conread position: | 112-361 |
| Cow position: | chr12:24032932-24032672 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 24, 178 |
| Conread position: | 113-276 |
| Cow position: | chr12:28213440-28213267 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 86, 92 |
| Conread position: | 113-292 |
| Cow position: | chr12:6226725-6226913 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 186 |
| Conread position: | 114-342 |
| Cow position: | chr12:31530213-31529977 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 114-351 |
| Cow position: | chr12:16359799-16359550 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 63, 27 |
| Conread position: | 115-342 |
| Cow position: | chr12:36568137-36568366 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 21, 158 |
| Conread position: | 116-348 |
| Cow position: | chr12:9229564-9229805 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 87, 29 |
| Conread position: | 121-387 |
| Cow position: | chr12:45801793-45802060 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 13, 103 |
| Conread position: | 132-351 |
| Cow position: | chr12:7311299-7311084 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 71, 50 |
| Conread position: | 133-314 |
| Cow position: | chr12:37728042-37727860 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 71, 59 |
| Conread position: | 133-342 |
| Cow position: | chr12:19154713-19154926 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 55, 150 |
| Conread position: | 133-342 |
| Cow position: | chr12:19872329-19872123 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 63, 48 |
| Conread position: | 133-351 |
| Cow position: | chr12:18076436-18076212 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 53, 141 |
| Conread position: | 133-369 |
| Cow position: | chr12:21486486-21486253 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 70, 110 |
| Conread position: | 136-329 |
| Cow position: | chr12:40307597-40307394 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 67, 153 |
| Conread position: | 137-349 |
| Cow position: | chr12:46635046-46635266 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 48, 148 |
| Conread position: | 141-328 |
| Cow position: | chr12:6687756-6687568 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 62, 138 |
| Conread position: | 142-365 |
| Cow position: | chr12:11590618-11590403 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 50, 58 |
| Conread position: | 146-332 |
| Cow position: | chr12:44766971-44766778 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 60, 47 |
| Conread position: | 148-349 |
| Cow position: | chr12:36954487-36954697 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 45, 140 |
| Conread position: | 156-386 |
| Cow position: | chr12:37123390-37123153 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 47, 37 |
| Conread position: | 346-499 |
| Cow position: | chr12:27932518-27932663 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 368-493 |
| Cow position: | chr12:6406238-6406363 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 368-493 |
| Cow position: | chr12:22205335-22205460 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 368-499 |
| Cow position: | chr12:1402903-1402772 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 368-499 |
| Cow position: | chr12:42859415-42859546 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 19, 121 |
| Conread position: | 368-507 |
| Cow position: | chr12:21198370-21198234 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 368-518 |
| Cow position: | chr12:28765610-28765758 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 370-475 |
| Cow position: | chr12:21254253-21254358 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 370-500 |
| Cow position: | chr12:4157781-4157651 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 370-500 |
| Cow position: | chr12:33986566-33986436 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 370-542 |
| Cow position: | chr12:8197620-8197448 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 381-507 |
| Cow position: | chr12:21942162-21942036 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 384-507 |
| Cow position: | chr12:251665-251787 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 100, 0 |
Show alignments to all cow chromosomes.