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Cow genome map

           
Conread name:
           
Ova1-OVRM10096A12
        

               
Conread position:
               
1-312
               

               
Cow position:
               
chr7:39093809-39094119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
54, 46
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr7:66179673-66180022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
13, 28
               

               
Conread position:
               
2-351
               

               
Cow position:
               
chr7:39155230-39154864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
86, 95
               

               
Conread position:
               
5-322
               

               
Cow position:
               
chr7:7106670-7106997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
87, 36
               

               
Conread position:
               
5-330
               

               
Cow position:
               
chr7:44049258-44049587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
6-231
               

               
Cow position:
               
chr7:38025936-38025706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
82, 98
               

               
Conread position:
               
6-234
               

               
Cow position:
               
chr7:23636815-23636588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
82, 44
               

               
Conread position:
               
6-254
               

               
Cow position:
               
chr7:14524591-14524340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
82, 107
               

               
Conread position:
               
6-298
               

               
Cow position:
               
chr7:35286528-35286822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
122, 97
               

               
Conread position:
               
6-299
               

               
Cow position:
               
chr7:24932305-24932605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
82, 23
               

               
Conread position:
               
6-300
               

               
Cow position:
               
chr7:13963323-13963010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
50, 41
               

               
Conread position:
               
6-301
               

               
Cow position:
               
chr7:51039543-51039238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
87, 17
               

               
Conread position:
               
6-317
               

               
Cow position:
               
chr7:3026607-3026933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
130, 78
               

               
Conread position:
               
6-318
               

               
Cow position:
               
chr7:52718527-52718845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
83, 24
               

               
Conread position:
               
6-321
               

               
Cow position:
               
chr7:40406761-40406448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 92
               

               
Conread position:
               
6-322
               

               
Cow position:
               
chr7:44596590-44596904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
98, 43
               

               
Conread position:
               
6-322
               

               
Cow position:
               
chr7:48406381-48406715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 103
               

               
Conread position:
               
6-328
               

               
Cow position:
               
chr7:16022407-16022082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 98
               

               
Conread position:
               
6-332
               

               
Cow position:
               
chr7:25263480-25263142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
49, 41
               

               
Conread position:
               
6-333
               

               
Cow position:
               
chr7:40067773-40067432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
101, 287
               

               
Conread position:
               
6-333
               

               
Cow position:
               
chr7:59558065-59558388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
82, 55
               

               
Conread position:
               
6-342
               

               
Cow position:
               
chr7:1720858-1721203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
82, 43
               

               
Conread position:
               
6-346
               

               
Cow position:
               
chr7:47931684-47932034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 283
               

               
Conread position:
               
6-347
               

               
Cow position:
               
chr7:19267258-19267609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 55
               

               
Conread position:
               
6-348
               

               
Cow position:
               
chr7:4892971-4892621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
82, 32
               

               
Conread position:
               
6-348
               

               
Cow position:
               
chr7:45158234-45157892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
82, 106
               

               
Conread position:
               
6-351
               

               
Cow position:
               
chr7:14632477-14632133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
130, 84
               

               
Conread position:
               
6-351
               

               
Cow position:
               
chr7:42222826-42223190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 292
               

               
Conread position:
               
6-351
               

               
Cow position:
               
chr7:57258911-57259274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 290
               

               
Conread position:
               
6-365
               

               
Cow position:
               
chr7:23568624-23568999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 48
               

               
Conread position:
               
7-216
               

               
Cow position:
               
chr7:21122148-21122360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
81, 97
               

               
Conread position:
               
7-217
               

               
Cow position:
               
chr7:28544288-28544073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
81, 107
               

               
Conread position:
               
7-230
               

               
Cow position:
               
chr7:8272773-8272544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
7-230
               

               
Cow position:
               
chr7:58923509-58923280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
81, 100
               

               
Conread position:
               
7-234
               

               
Cow position:
               
chr7:34412167-34412394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
81, 46
               

               
Conread position:
               
7-259
               

               
Cow position:
               
chr7:23251455-23251706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
86, 42
               

               
Conread position:
               
7-267
               

               
Cow position:
               
chr7:21565453-21565712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
82, 36
               

               
Conread position:
               
7-273
               

               
Cow position:
               
chr7:61790241-61790523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
7-276
               

               
Cow position:
               
chr7:43103322-43103626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
7-298
               

               
Cow position:
               
chr7:48714965-48714657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
81, 289
               

               
Conread position:
               
7-299
               

               
Cow position:
               
chr7:37697916-37697612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 141
               

               
Conread position:
               
7-307
               

               
Cow position:
               
chr7:32079562-32079253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
85, 16
               

               
Conread position:
               
7-314
               

               
Cow position:
               
chr7:29479638-29479330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
94, 38
               

               
Conread position:
               
7-316
               

               
Cow position:
               
chr7:3336439-3336758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
81, 284
               

               
Conread position:
               
7-324
               

               
Cow position:
               
chr7:60547554-60547881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
48, 40
               

               
Conread position:
               
7-332
               

               
Cow position:
               
chr7:17713360-17713689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
99, 277
               

               
Conread position:
               
7-332
               

               
Cow position:
               
chr7:28917202-28916866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 117
               

               
Conread position:
               
7-333
               

               
Cow position:
               
chr7:29027250-29026947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
290, 73
               

               
Conread position:
               
7-333
               

               
Cow position:
               
chr7:36996473-36996152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
192, 73
               

               
Conread position:
               
7-339
               

               
Cow position:
               
chr7:26911329-26911669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 29
               

               
Conread position:
               
7-340
               

               
Cow position:
               
chr7:31094236-31094577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
7-341
               

               
Cow position:
               
chr7:36278409-36278061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
70, 29
               

               
Conread position:
               
7-342
               

               
Cow position:
               
chr7:9136949-9136604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 278
               

               
Conread position:
               
7-342
               

               
Cow position:
               
chr7:14536170-14536506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
82, 37
               

               
Conread position:
               
7-342
               

               
Cow position:
               
chr7:32915226-32914877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 112
               

               
Conread position:
               
7-342
               

               
Cow position:
               
chr7:35274969-35275306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
81, 43
               

               
Conread position:
               
7-342
               

               
Cow position:
               
chr7:35893528-35893176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
25, 42
               

               
Conread position:
               
7-345
               

               
Cow position:
               
chr7:11066590-11066236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
82, 37
               

               
Conread position:
               
7-348
               

               
Cow position:
               
chr7:26631701-26632052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 101
               

               
Conread position:
               
7-348
               

               
Cow position:
               
chr7:44454169-44454506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
81, 99
               

               
Conread position:
               
7-351
               

               
Cow position:
               
chr7:6058239-6057886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
86, 213
               

               
Conread position:
               
7-351
               

               
Cow position:
               
chr7:10512602-10512956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
94, 47
               

               
Conread position:
               
7-351
               

               
Cow position:
               
chr7:11869729-11870073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 40
               

               
Conread position:
               
7-351
               

               
Cow position:
               
chr7:15566863-15566530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 127
               

               
Conread position:
               
7-351
               

               
Cow position:
               
chr7:17816860-17816515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
81, 106
               

               
Conread position:
               
7-351
               

               
Cow position:
               
chr7:20534983-20534638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
81, 124
               

               
Conread position:
               
7-351
               

               
Cow position:
               
chr7:23646722-23646359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 111
               

               
Conread position:
               
7-351
               

               
Cow position:
               
chr7:30931866-30932218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
82, 42
               

               
Conread position:
               
7-351
               

               
Cow position:
               
chr7:32710874-32711224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
82, 9
               

               
Conread position:
               
7-351
               

               
Cow position:
               
chr7:36665436-36665086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
196, 101
               

               
Conread position:
               
7-351
               

               
Cow position:
               
chr7:38082267-38081912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
45, 56
               

               
Conread position:
               
7-351
               

               
Cow position:
               
chr7:44589747-44590086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
81, 31
               

               
Conread position:
               
7-351
               

               
Cow position:
               
chr7:46856852-46857198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
85, 104
               

               
Conread position:
               
7-351
               

               
Cow position:
               
chr7:58301828-58302189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
81, 288
               

               
Conread position:
               
7-351
               

               
Cow position:
               
chr7:63749365-63749725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 109
               

               
Conread position:
               
7-370
               

               
Cow position:
               
chr7:64364417-64364791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
82, 97
               

               
Conread position:
               
7-389
               

               
Cow position:
               
chr7:25512013-25512404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
129, 96
               

               
Conread position:
               
8-223
               

               
Cow position:
               
chr7:9781614-9781836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
80, 113
               

               
Conread position:
               
8-234
               

               
Cow position:
               
chr7:21166132-21166367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
80, 118
               

               
Conread position:
               
8-320
               

               
Cow position:
               
chr7:30155838-30156172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
40, 293
               

               
Conread position:
               
8-320
               

               
Cow position:
               
chr7:46823780-46823455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
80, 100
               

               
Conread position:
               
8-330
               

               
Cow position:
               
chr7:6706410-6706074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
42, 33
               

               
Conread position:
               
8-334
               

               
Cow position:
               
chr7:40321598-40321262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
69, 101
               

               
Conread position:
               
8-336
               

               
Cow position:
               
chr7:64228782-64229122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
80, 286
               

               
Conread position:
               
8-342
               

               
Cow position:
               
chr7:8812827-8813161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
180, 88
               

               
Conread position:
               
8-342
               

               
Cow position:
               
chr7:18498691-18499037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
80, 215
               

               
Conread position:
               
8-342
               

               
Cow position:
               
chr7:40008939-40008583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 293
               

               
Conread position:
               
8-342
               

               
Cow position:
               
chr7:59692183-59691838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
47, 69
               

               
Conread position:
               
8-342
               

               
Cow position:
               
chr7:64268884-64269220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
80, 89
               

               
Conread position:
               
8-343
               

               
Cow position:
               
chr7:32284031-32283677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 26
               

               
Conread position:
               
8-351
               

               
Cow position:
               
chr7:8877990-8877633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
80, 112
               

               
Conread position:
               
8-351
               

               
Cow position:
               
chr7:19466140-19466505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
8-351
               

               
Cow position:
               
chr7:36717362-36717706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
128, 57
               

               
Conread position:
               
8-351
               

               
Cow position:
               
chr7:39103328-39103668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
127, 80
               

               
Conread position:
               
8-351
               

               
Cow position:
               
chr7:39170020-39169658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
80, 107
               

               
Conread position:
               
8-351
               

               
Cow position:
               
chr7:39939846-39939495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
80, 123
               

               
Conread position:
               
8-351
               

               
Cow position:
               
chr7:53097701-53097355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 218
               

               
Conread position:
               
8-351
               

               
Cow position:
               
chr7:66894429-66894784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
81, 116
               

               
Conread position:
               
8-353
               

               
Cow position:
               
chr7:63378504-63378148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
63, 278
               

               
Conread position:
               
8-387
               

               
Cow position:
               
chr7:47547519-47547114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
80, 87
               

               
Conread position:
               
9-339
               

               
Cow position:
               
chr7:63112666-63113002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
79, 101
               

               
Conread position:
               
9-342
               

               
Cow position:
               
chr7:22623993-22624340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
81, 284
               

               
Conread position:
               
9-348
               

               
Cow position:
               
chr7:58967376-58967034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
66, 105
               

               
Conread position:
               
9-351
               

               
Cow position:
               
chr7:32317004-32316656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 89
               

               
Conread position:
               
10-223
               

               
Cow position:
               
chr7:5199443-5199659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
78, 33
               

               
Conread position:
               
10-275
               

               
Cow position:
               
chr7:32372966-32372689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
9, 40
               

               
Conread position:
               
10-306
               

               
Cow position:
               
chr7:40121580-40121267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
49, 286
               

               
Conread position:
               
10-333
               

               
Cow position:
               
chr7:3256237-3256569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
87, 280
               

               
Conread position:
               
10-342
               

               
Cow position:
               
chr7:17757141-17756807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
78, 28
               

               
Conread position:
               
10-342
               

               
Cow position:
               
chr7:43908314-43907970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 122
               

               
Conread position:
               
10-348
               

               
Cow position:
               
chr7:39444504-39444839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
78, 33
               

               
Conread position:
               
10-351
               

               
Cow position:
               
chr7:11783320-11783662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
78, 223
               

               
Conread position:
               
10-351
               

               
Cow position:
               
chr7:15570146-15569801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
78, 96
               

               
Conread position:
               
13-231
               

               
Cow position:
               
chr7:42593173-42593392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
79, 189
               

               
Conread position:
               
13-332
               

               
Cow position:
               
chr7:38060321-38060658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
42, 34
               

               
Conread position:
               
13-342
               

               
Cow position:
               
chr7:31315414-31315088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
75, 94
               

               
Conread position:
               
13-351
               

               
Cow position:
               
chr7:42295972-42296313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
121, 48
               

               
Conread position:
               
13-351
               

               
Cow position:
               
chr7:49648462-49648119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
75, 36
               

               
Conread position:
               
13-351
               

               
Cow position:
               
chr7:57537418-57537770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
89, 169
               

               
Conread position:
               
14-334
               

               
Cow position:
               
chr7:11714322-11714656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
74, 47
               

               
Conread position:
               
16-318
               

               
Cow position:
               
chr7:59168367-59168066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
76, 97
               

               
Conread position:
               
16-330
               

               
Cow position:
               
chr7:31694537-31694839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
72, 87
               

               
Conread position:
               
16-333
               

               
Cow position:
               
chr7:19230413-19230727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
72, 93
               

               
Conread position:
               
16-351
               

               
Cow position:
               
chr7:14541967-14542295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
120, 30
               

               
Conread position:
               
17-234
               

               
Cow position:
               
chr7:40051658-40051875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
119, 88
               

               
Conread position:
               
17-300
               

               
Cow position:
               
chr7:52536152-52536443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
71, 207
               

               
Conread position:
               
17-309
               

               
Cow position:
               
chr7:59075951-59075651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
75, 272
               

               
Conread position:
               
17-341
               

               
Cow position:
               
chr7:58862783-58863113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
71, 31
               

               
Conread position:
               
18-308
               

               
Cow position:
               
chr7:43882181-43881877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
70, 106
               

               
Conread position:
               
18-389
               

               
Cow position:
               
chr7:31170848-31171230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
74, 202
               

               
Conread position:
               
21-325
               

               
Cow position:
               
chr7:1558831-1558518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
67, 81
               

               
Conread position:
               
25-342
               

               
Cow position:
               
chr7:45927072-45927389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
63, 53
               

               
Conread position:
               
25-351
               

               
Cow position:
               
chr7:37361970-37361640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
63, 21
               

               
Conread position:
               
26-341
               

               
Cow position:
               
chr7:4452695-4452365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
63, 20
               

               
Conread position:
               
26-348
               

               
Cow position:
               
chr7:39518385-39518060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
63, 31
               

               
Conread position:
               
27-226
               

               
Cow position:
               
chr7:14353697-14353901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
29-239
               

               
Cow position:
               
chr7:40336129-40335914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
72, 85
               

               
Conread position:
               
29-387
               

               
Cow position:
               
chr7:60483336-60483704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
59, 74
               

               
Conread position:
               
30-342
               

               
Cow position:
               
chr7:49751217-49750889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
30-381
               

               
Cow position:
               
chr7:47513596-47513964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
59, 267
               

               
Conread position:
               
32-269
               

               
Cow position:
               
chr7:1376224-1375983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
56, 71
               

               
Conread position:
               
32-363
               

               
Cow position:
               
chr7:45747759-45748087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
104, 64
               

               
Conread position:
               
35-342
               

               
Cow position:
               
chr7:6042056-6041754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
102, 71
               

               
Conread position:
               
36-351
               

               
Cow position:
               
chr7:15755364-15755693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 257
               

               
Conread position:
               
48-325
               

               
Cow position:
               
chr7:51319869-51319582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
40, 21
               

               
Conread position:
               
48-351
               

               
Cow position:
               
chr7:28584317-28584003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
40, 76
               

               
Conread position:
               
49-351
               

               
Cow position:
               
chr7:13593838-13593531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
39, 54
               

               
Conread position:
               
50-312
               

               
Cow position:
               
chr7:40303197-40303468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
38, 54
               

               
Conread position:
               
50-342
               

               
Cow position:
               
chr7:53992772-53992464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
22, 7
               

               
Conread position:
               
50-351
               

               
Cow position:
               
chr7:32819887-32819568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
37, 63
               

               
Conread position:
               
54-342
               

               
Cow position:
               
chr7:49942364-49942657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
34, 55
               

               
Conread position:
               
54-351
               

               
Cow position:
               
chr7:65122403-65122098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
80, 37
               

               
Conread position:
               
54-363
               

               
Cow position:
               
chr7:41445427-41445107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
34, 236
               

               
Conread position:
               
54-365
               

               
Cow position:
               
chr7:40952794-40953123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
34, 240
               

               
Conread position:
               
55-348
               

               
Cow position:
               
chr7:61817872-61818175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
33, 238
               

               
Conread position:
               
55-351
               

               
Cow position:
               
chr7:18873278-18872969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
22, 237
               

               
Conread position:
               
56-346
               

               
Cow position:
               
chr7:51072306-51072001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
32, 238
               

               
Conread position:
               
60-332
               

               
Cow position:
               
chr7:24718473-24718759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
75, 29
               

               
Conread position:
               
62-308
               

               
Cow position:
               
chr7:61765374-61765113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
26, 230
               

               
Conread position:
               
62-327
               

               
Cow position:
               
chr7:12212543-12212826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
26, 232
               

               
Conread position:
               
62-342
               

               
Cow position:
               
chr7:13928096-13928389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
26, 90
               

               
Conread position:
               
62-351
               

               
Cow position:
               
chr7:49736056-49735753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
26, 45
               

               
Conread position:
               
62-379
               

               
Cow position:
               
chr7:7476391-7476719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
26, 226
               

               
Conread position:
               
63-263
               

               
Cow position:
               
chr7:44942510-44942301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
25, 164
               

               
Conread position:
               
63-297
               

               
Cow position:
               
chr7:41327983-41328228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
25, 227
               

               
Conread position:
               
63-316
               

               
Cow position:
               
chr7:63946531-63946780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
30, 43
               

               
Conread position:
               
63-324
               

               
Cow position:
               
chr7:48020475-48020219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
25, 44
               

               
Conread position:
               
63-332
               

               
Cow position:
               
chr7:25860140-25860413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 54
               

               
Conread position:
               
63-342
               

               
Cow position:
               
chr7:46148914-46148631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
25, 101
               

               
Conread position:
               
63-346
               

               
Cow position:
               
chr7:42431884-42431586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 232
               

               
Conread position:
               
64-333
               

               
Cow position:
               
chr7:600390-600118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
24, 125
               

               
Conread position:
               
64-347
               

               
Cow position:
               
chr7:27994316-27994609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 42
               

               
Conread position:
               
64-351
               

               
Cow position:
               
chr7:58614843-58614551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
24, 69
               

               
Conread position:
               
65-234
               

               
Cow position:
               
chr7:24564566-24564734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
23, 10
               

               
Conread position:
               
66-342
               

               
Cow position:
               
chr7:35652020-35652314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
22, 229
               

               
Conread position:
               
73-346
               

               
Cow position:
               
chr7:23679546-23679834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
15, 35
               

               
Conread position:
               
75-338
               

               
Cow position:
               
chr7:67839381-67839110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 17
               

               
Conread position:
               
75-348
               

               
Cow position:
               
chr7:21573330-21573045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
61, 17
               

               
Conread position:
               
77-351
               

               
Cow position:
               
chr7:40189596-40189307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
11, 27
               

               
Conread position:
               
77-354
               

               
Cow position:
               
chr7:56886743-56887026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
16, 31
               

               
Conread position:
               
86-369
               

               
Cow position:
               
chr7:36569882-36569600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
24, 215
               

               
Conread position:
               
91-330
               

               
Cow position:
               
chr7:66748497-66748747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
14, 30
               

               
Conread position:
               
91-351
               

               
Cow position:
               
chr7:43784634-43784385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
45, 115
               

               
Conread position:
               
92-348
               

               
Cow position:
               
chr7:61823830-61824094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
41, 20
               

               
Conread position:
               
92-351
               

               
Cow position:
               
chr7:53269223-53268948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
18, 201
               

               
Conread position:
               
93-328
               

               
Cow position:
               
chr7:14712179-14712414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
43, 12
               

               
Conread position:
               
93-338
               

               
Cow position:
               
chr7:42460460-42460203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
42, 27
               

               
Conread position:
               
93-348
               

               
Cow position:
               
chr7:10550954-10551209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
43, 13
               

               
Conread position:
               
93-351
               

               
Cow position:
               
chr7:24778091-24778355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 189
               

               
Conread position:
               
95-312
               

               
Cow position:
               
chr7:255790-256012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
43, 55
               

               
Conread position:
               
96-346
               

               
Cow position:
               
chr7:53772307-53772553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
17, 141
               

               
Conread position:
               
97-330
               

               
Cow position:
               
chr7:4418440-4418689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
39, 198
               

               
Conread position:
               
97-351
               

               
Cow position:
               
chr7:23619064-23619329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
28, 194
               

               
Conread position:
               
98-322
               

               
Cow position:
               
chr7:61551920-61551697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
38, 19
               

               
Conread position:
               
98-346
               

               
Cow position:
               
chr7:34716266-34716005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 14
               

               
Conread position:
               
99-332
               

               
Cow position:
               
chr7:147431-147186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
37, 179
               

               
Conread position:
               
100-334
               

               
Cow position:
               
chr7:26838674-26838438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
36, 10
               

               
Conread position:
               
100-347
               

               
Cow position:
               
chr7:59688556-59688297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
36, 184
               

               
Conread position:
               
100-348
               

               
Cow position:
               
chr7:24796676-24796931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
85, 174
               

               
Conread position:
               
106-332
               

               
Cow position:
               
chr7:47046474-47046260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
106-351
               

               
Cow position:
               
chr7:205755-205512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
8, 56
               

               
Conread position:
               
108-351
               

               
Cow position:
               
chr7:14450351-14450111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
28, 98
               

               
Conread position:
               
108-351
               

               
Cow position:
               
chr7:33697964-33697729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
26, 119
               

               
Conread position:
               
108-351
               

               
Cow position:
               
chr7:53034310-53034556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 135
               

               
Conread position:
               
108-366
               

               
Cow position:
               
chr7:59843743-59844021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
14, 184
               

               
Conread position:
               
108-369
               

               
Cow position:
               
chr7:63968207-63968464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
24, 41
               

               
Conread position:
               
108-374
               

               
Cow position:
               
chr7:21650113-21649833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
18, 183
               

               
Conread position:
               
109-320
               

               
Cow position:
               
chr7:42894454-42894238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
17, 11
               

               
Conread position:
               
109-332
               

               
Cow position:
               
chr7:14458910-14459140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
70, 33
               

               
Conread position:
               
109-332
               

               
Cow position:
               
chr7:42244686-42244921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
27, 179
               

               
Conread position:
               
112-301
               

               
Cow position:
               
chr7:12201916-12202110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
24, 172
               

               
Conread position:
               
112-317
               

               
Cow position:
               
chr7:67816908-67816698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
25, 74
               

               
Conread position:
               
112-330
               

               
Cow position:
               
chr7:31881683-31881465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
24, 145
               

               
Conread position:
               
112-332
               

               
Cow position:
               
chr7:52382973-52383197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
91, 30
               

               
Conread position:
               
112-342
               

               
Cow position:
               
chr7:21327041-21326809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
13, 54
               

               
Conread position:
               
112-346
               

               
Cow position:
               
chr7:29010390-29010630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
22, 184
               

               
Conread position:
               
112-348
               

               
Cow position:
               
chr7:20968437-20968191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
91, 19
               

               
Conread position:
               
113-351
               

               
Cow position:
               
chr7:9145474-9145726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
23, 181
               

               
Conread position:
               
115-332
               

               
Cow position:
               
chr7:39930295-39930074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
21, 150
               

               
Conread position:
               
132-332
               

               
Cow position:
               
chr7:27551199-27551399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
57, 46
               

               
Conread position:
               
133-320
               

               
Cow position:
               
chr7:20537345-20537150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
70, 154
               

               
Conread position:
               
133-323
               

               
Cow position:
               
chr7:43109548-43109747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 151
               

               
Conread position:
               
133-330
               

               
Cow position:
               
chr7:64949095-64948898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
70, 149
               

               
Conread position:
               
133-333
               

               
Cow position:
               
chr7:17782696-17782898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
70, 148
               

               
Conread position:
               
133-342
               

               
Cow position:
               
chr7:23099061-23099271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
70, 149
               

               
Conread position:
               
133-345
               

               
Cow position:
               
chr7:27136484-27136259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
70, 158
               

               
Conread position:
               
133-347
               

               
Cow position:
               
chr7:28090215-28090001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 148
               

               
Conread position:
               
133-347
               

               
Cow position:
               
chr7:39164365-39164150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
53, 82
               

               
Conread position:
               
133-348
               

               
Cow position:
               
chr7:52295113-52294894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
133-351
               

               
Cow position:
               
chr7:10069730-10069950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
60, 147
               

               
Conread position:
               
133-351
               

               
Cow position:
               
chr7:38024330-38024555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
70, 151
               

               
Conread position:
               
133-362
               

               
Cow position:
               
chr7:24213866-24213629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
55, 159
               

               
Conread position:
               
136-348
               

               
Cow position:
               
chr7:56820592-56820812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
67, 151
               

               
Conread position:
               
141-351
               

               
Cow position:
               
chr7:23477350-23477548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
62, 109
               

               
Conread position:
               
141-380
               

               
Cow position:
               
chr7:18247831-18248082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
62, 151
               

               
Conread position:
               
142-332
               

               
Cow position:
               
chr7:29345960-29346161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
51, 148
               

               
Conread position:
               
142-336
               

               
Cow position:
               
chr7:44697853-44697669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
142-344
               

               
Cow position:
               
chr7:27991581-27991779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
100, 77
               

               
Conread position:
               
142-351
               

               
Cow position:
               
chr7:47503628-47503415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
61, 141
               

               
Conread position:
               
144-351
               

               
Cow position:
               
chr7:14187263-14187484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
148-321
               

               
Cow position:
               
chr7:63299236-63299053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
7, 142
               

               
Conread position:
               
148-349
               

               
Cow position:
               
chr7:32693084-32693292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
47, 37
               

               
Conread position:
               
150-332
               

               
Cow position:
               
chr7:25867541-25867730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
38, 136
               

               
Conread position:
               
150-333
               

               
Cow position:
               
chr7:20827655-20827841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
53, 132
               

               
Conread position:
               
158-302
               

               
Cow position:
               
chr7:14029291-14029141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
45, 125
               

               
Conread position:
               
160-332
               

               
Cow position:
               
chr7:56081476-56081306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
44, 76
               

               
Conread position:
               
178-347
               

               
Cow position:
               
chr7:17950796-17950628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
26, 37
               

               
Conread position:
               
341-510
               

               
Cow position:
               
chr7:39792251-39792088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
6, 18
               

               
Conread position:
               
345-507
               

               
Cow position:
               
chr7:27787121-27786955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
355-499
               

               
Cow position:
               
chr7:54644029-54644173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
360-500
               

               
Cow position:
               
chr7:43830552-43830690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
367-507
               

               
Cow position:
               
chr7:21985876-21985735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
85, 123
               

               
Conread position:
               
367-507
               

               
Cow position:
               
chr7:29470931-29470797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
368-486
               

               
Cow position:
               
chr7:39107446-39107564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
368-493
               

               
Cow position:
               
chr7:25250573-25250445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
368-499
               

               
Cow position:
               
chr7:19924353-19924484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
368-499
               

               
Cow position:
               
chr7:21127191-21127320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
368-502
               

               
Cow position:
               
chr7:8144771-8144903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
368-502
               

               
Cow position:
               
chr7:14139127-14139260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
368-502
               

               
Cow position:
               
chr7:24807984-24808125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
84, 128
               

               
Conread position:
               
368-502
               

               
Cow position:
               
chr7:33405768-33405901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
368-506
               

               
Cow position:
               
chr7:68232411-68232274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
368-507
               

               
Cow position:
               
chr7:10430951-10431082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
368-507
               

               
Cow position:
               
chr7:13537111-13537248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
368-507
               

               
Cow position:
               
chr7:21234538-21234676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
368-507
               

               
Cow position:
               
chr7:21929614-21929477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
368-507
               

               
Cow position:
               
chr7:34149572-34149434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
368-507
               

               
Cow position:
               
chr7:54603324-54603187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
369-503
               

               
Cow position:
               
chr7:58994063-58993928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
370-493
               

               
Cow position:
               
chr7:61808697-61808574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
370-500
               

               
Cow position:
               
chr7:16407-16537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
370-500
               

               
Cow position:
               
chr7:3300691-3300821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
370-500
               

               
Cow position:
               
chr7:11447022-11446891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
370-500
               

               
Cow position:
               
chr7:20515307-20515437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
370-500
               

               
Cow position:
               
chr7:21320621-21320491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
370-500
               

               
Cow position:
               
chr7:61559678-61559548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
371-493
               

               
Cow position:
               
chr7:20798982-20799104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
371-499
               

               
Cow position:
               
chr7:46901610-46901738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
371-507
               

               
Cow position:
               
chr7:4415846-4415709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
371-507
               

               
Cow position:
               
chr7:67799321-67799186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
371-508
               

               
Cow position:
               
chr7:55279874-55280011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
385-507
               

               
Cow position:
               
chr7:1610754-1610876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
397-506
               

               
Cow position:
               
chr7:26894220-26894111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.