Cow genome map

Conread name: Ova1-OVRM10096A12

Conread position: 1-314
Cow position: chrX:1503429-1503117 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 223
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 135, 62

Conread position: 1-351
Cow position: chrX:12290821-12290477 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 239
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 87, 106

Conread position: 5-262
Cow position: chrX:6407641-6407376 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 187
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 83, 25

Conread position: 6-188
Cow position: chrX:20881848-20882025 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 82, 10

Conread position: 6-192
Cow position: chrX:37129366-37129177 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 82, 159

Conread position: 6-194
Cow position: chrX:20168655-20168464 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 82, 98

Conread position: 6-230
Cow position: chrX:27228223-27227992 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 82, 101

Conread position: 6-234
Cow position: chrX:22454001-22454227 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 82, 39

Conread position: 6-234
Cow position: chrX:41027256-41027022 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 82, 192

Conread position: 6-240
Cow position: chrX:29680164-29680401 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 81, 100

Conread position: 6-276
Cow position: chrX:43730127-43730401 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 190
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 83, 61

Conread position: 6-304
Cow position: chrX:27175095-27174782 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 225
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 82, 41

Conread position: 6-313
Cow position: chrX:11633779-11633457 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 217
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 82, 287

Conread position: 6-323
Cow position: chrX:37910542-37910222 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 226
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 83, 139

Conread position: 6-329
Cow position: chrX:6690163-6690485 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 232
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 82, 96

Conread position: 6-329
Cow position: chrX:42247085-42247420 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 244
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 82, 178

Conread position: 6-330
Cow position: chrX:42492426-42492748 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 231
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 184, 75

Conread position: 6-332
Cow position: chrX:21004781-21004444 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 238
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 82, 105

Conread position: 6-332
Cow position: chrX:21672657-21672311 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 246
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 46, 106

Conread position: 6-332
Cow position: chrX:34543881-34543547 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 243
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 82, 136

Conread position: 6-342
Cow position: chrX:20697512-20697856 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 245
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 82, 103

Conread position: 6-342
Cow position: chrX:34441357-34441700 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 86

Conread position: 6-345
Cow position: chrX:12309289-12309642 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 117

Conread position: 6-345
Cow position: chrX:47481893-47481545 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 241
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 82, 44

Conread position: 6-346
Cow position: chrX:28878077-28878416 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 96

Conread position: 6-348
Cow position: chrX:27705683-27705337 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 281

Conread position: 6-348
Cow position: chrX:35268958-35268634 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 250
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 191, 37

Conread position: 6-348
Cow position: chrX:43527605-43527247 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 250
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 83, 90

Conread position: 6-351
Cow position: chrX:161509-161169 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 248
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 82, 190

Conread position: 6-351
Cow position: chrX:15007052-15007410 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 252
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 82, 101

Conread position: 6-351
Cow position: chrX:15147100-15147445 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 257
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 82, 37

Conread position: 6-351
Cow position: chrX:18694834-18695180 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 47

Conread position: 6-351
Cow position: chrX:20151953-20151591 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 256
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 87, 40

Conread position: 6-351
Cow position: chrX:31250485-31250133 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 199

Conread position: 6-351
Cow position: chrX:31294475-31294799 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 248
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 82, 96

Conread position: 6-351
Cow position: chrX:31442732-31443080 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 122

Conread position: 6-351
Cow position: chrX:34454754-34454410 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 245
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 83, 120

Conread position: 6-361
Cow position: chrX:9416587-9416962 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 266
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 60, 123

Conread position: 6-369
Cow position: chrX:28134435-28134071 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 260
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 45, 10

Conread position: 7-199
Cow position: chrX:42855554-42855356 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 7-234
Cow position: chrX:616163-616397 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 81, 0

Conread position: 7-234
Cow position: chrX:34314120-34313898 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 156
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 127, 85

Conread position: 7-235
Cow position: chrX:40685232-40685467 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 156
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 7-276
Cow position: chrX:31312125-31311839 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 193
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 7-276
Cow position: chrX:37781013-37781304 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 198
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 7-276
Cow position: chrX:42235428-42235720 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 203
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 81, 205

Conread position: 7-293
Cow position: chrX:1499761-1499468 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 208
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 79, 100

Conread position: 7-306
Cow position: chrX:34411942-34411625 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 213
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 81, 203

Conread position: 7-314
Cow position: chrX:46072721-46073044 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 224
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 82, 286

Conread position: 7-318
Cow position: chrX:22074896-22074574 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 227
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 28, 102

Conread position: 7-331
Cow position: chrX:11938837-11939163 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 236
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 56, 99

Conread position: 7-332
Cow position: chrX:4043771-4044090 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 234
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 81, 39

Conread position: 7-332
Cow position: chrX:23513921-23514258 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 54

Conread position: 7-336
Cow position: chrX:11656177-11655842 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 239
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 81, 99

Conread position: 7-342
Cow position: chrX:878284-878621 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 234
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 81, 127

Conread position: 7-342
Cow position: chrX:5118402-5118735 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 104

Conread position: 7-342
Cow position: chrX:38218810-38218465 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 228
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 81, 185

Conread position: 7-342
Cow position: chrX:38964204-38963859 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 219

Conread position: 7-343
Cow position: chrX:37232503-37232158 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 243
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 124, 90

Conread position: 7-348
Cow position: chrX:7572001-7571650 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 190

Conread position: 7-348
Cow position: chrX:40557583-40557932 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 73

Conread position: 7-351
Cow position: chrX:8797345-8796991 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 264
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 86, 40

Conread position: 7-351
Cow position: chrX:8869306-8869643 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 230
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 81, 108

Conread position: 7-351
Cow position: chrX:10831391-10831771 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 260
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 23, 0

Conread position: 7-351
Cow position: chrX:11082526-11082872 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 245
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 104, 139

Conread position: 7-351
Cow position: chrX:14883860-14884223 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 253
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 81, 289

Conread position: 7-351
Cow position: chrX:31436570-31436221 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 246
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 82, 100

Conread position: 7-351
Cow position: chrX:45968244-45967903 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 231
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 83, 97

Conread position: 7-353
Cow position: chrX:6544350-6543995 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 254
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 88, 39

Conread position: 7-361
Cow position: chrX:14599629-14599264 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 254
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 69, 42

Conread position: 7-363
Cow position: chrX:4768828-4768480 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 247
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 102, 36

Conread position: 7-364
Cow position: chrX:27393930-27394287 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 100

Conread position: 7-369
Cow position: chrX:26440689-26441058 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 265
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 81, 40

Conread position: 8-210
Cow position: chrX:17949398-17949601 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 68, 85

Conread position: 8-220
Cow position: chrX:40320501-40320284 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 149
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 80, 89

Conread position: 8-229
Cow position: chrX:35885632-35885861 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 79, 105

Conread position: 8-298
Cow position: chrX:46587917-46587611 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 221
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 85, 287

Conread position: 8-315
Cow position: chrX:6265504-6265809 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 222
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 80, 31

Conread position: 8-317
Cow position: chrX:21642387-21642703 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 222
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 128, 82

Conread position: 8-324
Cow position: chrX:15815179-15814865 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 88

Conread position: 8-324
Cow position: chrX:36976046-36975717 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 229
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 80, 66

Conread position: 8-326
Cow position: chrX:30962782-30963106 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 232
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 127, 100

Conread position: 8-333
Cow position: chrX:34662751-34663080 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 232
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 76, 114

Conread position: 8-339
Cow position: chrX:6278403-6278753 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 290

Conread position: 8-342
Cow position: chrX:11844146-11844491 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 238
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 80, 284

Conread position: 8-342
Cow position: chrX:30922266-30921932 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 238
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 69

Conread position: 8-347
Cow position: chrX:40826656-40827002 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 237
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 80, 86

Conread position: 8-348
Cow position: chrX:31948840-31949187 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 152

Conread position: 8-351
Cow position: chrX:2467979-2467621 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 255
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 88, 125

Conread position: 8-351
Cow position: chrX:15545977-15545638 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 252
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 127, 79

Conread position: 8-351
Cow position: chrX:23563696-23564056 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 112

Conread position: 8-351
Cow position: chrX:47344391-47344035 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 256
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 79, 162

Conread position: 8-351
Cow position: chrX:48194940-48195300 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 245
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 80, 288

Conread position: 9-276
Cow position: chrX:33000999-33000717 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 196
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 79, 199

Conread position: 9-332
Cow position: chrX:11856524-11856189 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 144

Conread position: 9-351
Cow position: chrX:45403731-45404093 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 252
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 79, 290

Conread position: 10-223
Cow position: chrX:27945961-27946183 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 78, 105

Conread position: 10-234
Cow position: chrX:42873475-42873257 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 78, 36

Conread position: 10-236
Cow position: chrX:22387157-22387380 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 80, 39

Conread position: 10-272
Cow position: chrX:32821121-32820847 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 192
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 47, 52

Conread position: 10-342
Cow position: chrX:34503013-34502670 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 251
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 78, 96

Conread position: 10-342
Cow position: chrX:42171201-42171549 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 248
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 78, 286

Conread position: 10-351
Cow position: chrX:17726068-17725719 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 246
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 78, 281

Conread position: 10-351
Cow position: chrX:41878841-41879190 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 253
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 78, 35

Conread position: 10-380
Cow position: chrX:34238812-34238432 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 265
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 76, 155

Conread position: 11-312
Cow position: chrX:29601736-29602053 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 236
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 78, 102

Conread position: 12-303
Cow position: chrX:29542126-29542430 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 214
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 84, 55

Conread position: 12-325
Cow position: chrX:12405290-12405602 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 220
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 76, 242

Conread position: 13-197
Cow position: chrX:10516343-10516159 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 76, 151

Conread position: 13-230
Cow position: chrX:9365586-9365806 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 37, 33

Conread position: 13-274
Cow position: chrX:36068105-36067835 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 182
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 75, 174

Conread position: 13-309
Cow position: chrX:29121137-29120841 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 211
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 77, 97

Conread position: 13-342
Cow position: chrX:5872407-5872063 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 91

Conread position: 13-342
Cow position: chrX:24287843-24288166 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 221
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 75, 34

Conread position: 13-345
Cow position: chrX:7646341-7646005 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 236
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 123, 75

Conread position: 13-351
Cow position: chrX:31729532-31729199 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 241
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 75, 106

Conread position: 13-380
Cow position: chrX:35224386-35224013 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 263
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 75, 84

Conread position: 14-345
Cow position: chrX:17542049-17541711 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 245
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 76, 99

Conread position: 15-276
Cow position: chrX:7162144-7161885 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 183
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 73, 35

Conread position: 16-198
Cow position: chrX:1572052-1572235 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 72, 90

Conread position: 16-217
Cow position: chrX:5679485-5679684 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 72, 34

Conread position: 16-328
Cow position: chrX:39558261-39558584 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 273

Conread position: 16-365
Cow position: chrX:20339805-20340165 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 87

Conread position: 16-365
Cow position: chrX:34402087-34401723 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 277

Conread position: 17-351
Cow position: chrX:30133232-30133583 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 249
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 71, 106

Conread position: 18-234
Cow position: chrX:29723825-29723606 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 70, 84

Conread position: 22-326
Cow position: chrX:47054444-47054761 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 215
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 68, 30

Conread position: 25-252
Cow position: chrX:19003371-19003147 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 63, 20

Conread position: 25-329
Cow position: chrX:45113697-45113391 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 220
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 53, 78

Conread position: 25-351
Cow position: chrX:34532598-34532272 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 235
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 61, 89

Conread position: 26-347
Cow position: chrX:41743991-41743658 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 22

Conread position: 26-351
Cow position: chrX:8900098-8899765 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 239
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 62, 7

Conread position: 27-249
Cow position: chrX:48044439-48044663 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 23, 15

Conread position: 27-326
Cow position: chrX:11589512-11589826 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 222
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 104, 62

Conread position: 27-329
Cow position: chrX:27771890-27772193 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 214
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 61, 27

Conread position: 27-332
Cow position: chrX:618926-619248 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 236
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 61, 89

Conread position: 30-301
Cow position: chrX:6234376-6234658 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 202
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 32, 260

Conread position: 33-386
Cow position: chrX:20801839-20801483 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 233
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 52, 89

Conread position: 34-332
Cow position: chrX:26875812-26876121 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 226
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 54, 82

Conread position: 34-333
Cow position: chrX:13785291-13785608 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 213
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 39-353
Cow position: chrX:6414111-6413785 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 217
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 68

Conread position: 49-275
Cow position: chrX:36356166-36355937 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 39, 57

Conread position: 49-330
Cow position: chrX:41166908-41167202 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 208
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 39, 244

Conread position: 49-351
Cow position: chrX:28845887-28845585 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 224
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 39, 160

Conread position: 50-235
Cow position: chrX:36961692-36961503 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 11

Conread position: 51-326
Cow position: chrX:41199158-41198870 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 37, 100

Conread position: 54-342
Cow position: chrX:15139498-15139795 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 208
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 34, 50

Conread position: 54-351
Cow position: chrX:42875032-42874719 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 55

Conread position: 54-362
Cow position: chrX:9635141-9635452 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 225
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 35, 56

Conread position: 54-369
Cow position: chrX:5017362-5017684 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 228
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 43, 233

Conread position: 60-369
Cow position: chrX:12116090-12115763 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 235
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 28, 250

Conread position: 62-351
Cow position: chrX:14925041-14924741 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 18

Conread position: 62-351
Cow position: chrX:27516571-27516274 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 218
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 26, 59

Conread position: 63-276
Cow position: chrX:3488848-3489071 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 63-326
Cow position: chrX:13382371-13382090 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 203
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 25, 233

Conread position: 63-332
Cow position: chrX:11673868-11673602 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 182
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 58

Conread position: 63-332
Cow position: chrX:37119636-37119359 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 201
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 25, 135

Conread position: 63-351
Cow position: chrX:13647745-13648043 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 39, 226

Conread position: 63-351
Cow position: chrX:42461704-42462007 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 217
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 25, 50

Conread position: 63-389
Cow position: chrX:17498125-17497798 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 160

Conread position: 64-332
Cow position: chrX:23970418-23970149 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 199
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 70

Conread position: 65-317
Cow position: chrX:29509402-29509669 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 36, 10

Conread position: 67-351
Cow position: chrX:19015473-19015183 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 70-295
Cow position: chrX:17908255-17908487 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 43

Conread position: 70-348
Cow position: chrX:38439514-38439217 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 225
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 19, 227

Conread position: 70-365
Cow position: chrX:35413651-35413356 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 36

Conread position: 75-332
Cow position: chrX:44053282-44053018 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 194
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 55, 31

Conread position: 78-344
Cow position: chrX:23497642-23497915 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 209
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 10, 148

Conread position: 91-317
Cow position: chrX:4750292-4750523 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 180

Conread position: 91-345
Cow position: chrX:35288665-35288407 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 179
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 62, 11

Conread position: 92-334
Cow position: chrX:35284631-35284375 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 195
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 44, 195

Conread position: 92-351
Cow position: chrX:23061446-23061195 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 192
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 17, 40

Conread position: 93-274
Cow position: chrX:1505720-1505528 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 8, 176

Conread position: 97-316
Cow position: chrX:10437662-10437889 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 173
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 85, 61

Conread position: 99-315
Cow position: chrX:7336832-7336613 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 153
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 36, 149

Conread position: 106-346
Cow position: chrX:25815912-25816150 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 188
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 30, 11

Conread position: 106-351
Cow position: chrX:35609986-35609727 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 187

Conread position: 108-329
Cow position: chrX:40116410-40116188 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 95, 23

Conread position: 108-348
Cow position: chrX:3653754-3653507 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 186
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 28, 66

Conread position: 108-363
Cow position: chrX:44397013-44396742 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 193
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 81

Conread position: 108-369
Cow position: chrX:30832854-30833113 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 197
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 23, 39

Conread position: 108-380
Cow position: chrX:38936692-38936410 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 202
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 28, 79

Conread position: 109-321
Cow position: chrX:13265631-13265849 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 17, 38

Conread position: 109-333
Cow position: chrX:42282422-42282195 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 27, 78

Conread position: 109-389
Cow position: chrX:35681335-35681037 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 226
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 27, 146

Conread position: 112-317
Cow position: chrX:28013456-28013665 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 182

Conread position: 112-325
Cow position: chrX:42338955-42339169 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 117, 29

Conread position: 112-342
Cow position: chrX:8925692-8925453 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 184
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 19, 174

Conread position: 112-342
Cow position: chrX:27442563-27442805 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 7, 171

Conread position: 112-351
Cow position: chrX:21665603-21665852 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 188
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 22, 178

Conread position: 116-374
Cow position: chrX:31260645-31260916 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 192
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 87, 8

Conread position: 117-332
Cow position: chrX:33855248-33855473 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 17, 8

Conread position: 117-380
Cow position: chrX:12249786-12249512 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 203
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 17, 57

Conread position: 119-316
Cow position: chrX:16323984-16324187 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 67, 19

Conread position: 125-332
Cow position: chrX:2206575-2206784 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 162
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 63, 88

Conread position: 128-327
Cow position: chrX:877056-877258 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 58, 30

Conread position: 132-319
Cow position: chrX:48684257-48684450 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 54, 151

Conread position: 132-328
Cow position: chrX:2383456-2383253 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 71, 10

Conread position: 133-277
Cow position: chrX:31256833-31256680 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 133-342
Cow position: chrX:15485657-15485878 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 167
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 55, 158

Conread position: 133-345
Cow position: chrX:9997368-9997586 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 70, 153

Conread position: 133-348
Cow position: chrX:32020152-32020378 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 176
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 55, 157

Conread position: 133-351
Cow position: chrX:24424421-24424652 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 170
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 70, 81

Conread position: 133-351
Cow position: chrX:33020451-33020227 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 172
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 70, 54

Conread position: 133-379
Cow position: chrX:48287482-48287728 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 170
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 70, 116

Conread position: 134-351
Cow position: chrX:40452243-40452472 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 176
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 69, 157

Conread position: 135-351
Cow position: chrX:27096082-27095860 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 147

Conread position: 136-351
Cow position: chrX:4123802-4123576 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 176
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 57, 154

Conread position: 140-342
Cow position: chrX:35937120-35937322 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 45

Conread position: 141-313
Cow position: chrX:45015538-45015364 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 52, 139

Conread position: 142-330
Cow position: chrX:17794941-17794747 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 71, 61

Conread position: 142-345
Cow position: chrX:39555871-39556070 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 159
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 15, 47

Conread position: 142-351
Cow position: chrX:46276444-46276642 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 62

Conread position: 146-328
Cow position: chrX:4942800-4942987 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 57, 136

Conread position: 148-363
Cow position: chrX:6640082-6639852 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 144

Conread position: 353-499
Cow position: chrX:21829759-21829612 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 122
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 9, 0

Conread position: 356-502
Cow position: chrX:31082198-31082052 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 31, 11

Conread position: 358-502
Cow position: chrX:12669635-12669779 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 367-499
Cow position: chrX:15127023-15127156 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 114
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 128, 32

Conread position: 367-499
Cow position: chrX:23391379-23391511 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 109
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 368-499
Cow position: chrX:29096420-29096289 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 112
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 368-500
Cow position: chrX:35530074-35529942 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 368-502
Cow position: chrX:13412920-13413054 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 117
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 44, 121

Conread position: 368-502
Cow position: chrX:22488400-22488267 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 120, 0

Conread position: 368-507
Cow position: chrX:2482417-2482556 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 119
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 18, 121

Conread position: 368-507
Cow position: chrX:16699519-16699381 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 118
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 120, 0

Conread position: 368-507
Cow position: chrX:17667680-17667817 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 54, 92

Conread position: 368-507
Cow position: chrX:18954306-18954444 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 120
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 120, 0

Conread position: 368-507
Cow position: chrX:21223140-21223009 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 368-507
Cow position: chrX:23019542-23019404 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 52, 0

Conread position: 368-507
Cow position: chrX:23040908-23041042 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 116
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 113, 0

Conread position: 368-508
Cow position: chrX:30183675-30183814 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 47

Conread position: 369-500
Cow position: chrX:16275887-16275757 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 369-502
Cow position: chrX:15599147-15599015 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 119, 0

Conread position: 369-502
Cow position: chrX:30178775-30178910 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 101
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 370-479
Cow position: chrX:3375902-3376011 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 370-492
Cow position: chrX:41404263-41404385 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 370-493
Cow position: chrX:5336276-5336399 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 370-493
Cow position: chrX:7030395-7030273 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 370-493
Cow position: chrX:8670801-8670678 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 370-493
Cow position: chrX:11464792-11464915 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 370-493
Cow position: chrX:14594981-14594858 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 370-493
Cow position: chrX:16812385-16812508 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 370-493
Cow position: chrX:22525394-22525517 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 370-493
Cow position: chrX:26399967-26400090 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 370-493
Cow position: chrX:29947917-29947794 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 370-495
Cow position: chrX:10531348-10531473 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 370-497
Cow position: chrX:7481842-7481715 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 370-500
Cow position: chrX:507457-507327 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 370-500
Cow position: chrX:982848-982718 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 370-500
Cow position: chrX:2102069-2101939 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 370-500
Cow position: chrX:2562647-2562777 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 370-500
Cow position: chrX:6872863-6872993 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 370-500
Cow position: chrX:8454962-8454832 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 370-500
Cow position: chrX:12280060-12280190 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 370-500
Cow position: chrX:12343166-12343036 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 370-500
Cow position: chrX:12353450-12353320 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 370-500
Cow position: chrX:13397910-13398040 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 370-500
Cow position: chrX:16362914-16363044 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 370-500
Cow position: chrX:17478312-17478442 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 370-500
Cow position: chrX:18219607-18219477 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 370-500
Cow position: chrX:22619098-22619228 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 370-500
Cow position: chrX:27426110-27426240 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 370-500
Cow position: chrX:28562004-28562134 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 370-500
Cow position: chrX:28585190-28585060 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 370-500
Cow position: chrX:29793907-29794032 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 370-500
Cow position: chrX:30055525-30055655 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 370-500
Cow position: chrX:30173461-30173591 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 370-500
Cow position: chrX:37849224-37849095 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 370-500
Cow position: chrX:39563721-39563851 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 370-500
Cow position: chrX:41410811-41410941 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 370-502
Cow position: chrX:13053237-13053110 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 72, 0

Conread position: 370-508
Cow position: chrX:26427429-26427568 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 371-493
Cow position: chrX:7093807-7093685 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 371-500
Cow position: chrX:8479859-8479729 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 371-507
Cow position: chrX:44387337-44387201 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 114
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 372-475
Cow position: chrX:5323515-5323618 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 372-482
Cow position: chrX:18534687-18534578 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 76, 53

Conread position: 372-493
Cow position: chrX:31187038-31187159 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 372-500
Cow position: chrX:11433909-11433781 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 372-500
Cow position: chrX:21304317-21304446 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 372-500
Cow position: chrX:28634209-28634336 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 6, 0

Conread position: 373-500
Cow position: chrX:5863605-5863478 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 373-500
Cow position: chrX:13076491-13076617 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 373-500
Cow position: chrX:13097065-13097191 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 373-500
Cow position: chrX:20359844-20359971 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 89, 95

Conread position: 373-502
Cow position: chrX:26528189-26528062 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 108
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 105, 0

Conread position: 391-500
Cow position: chrX:5283546-5283655 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 392-507
Cow position: chrX:24275866-24275750 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 109, 0

Conread position: 397-502
Cow position: chrX:32467441-32467337 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 91, 0

Show alignments to all cow chromosomes.